BAC Information

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BAC

Clone NameB6Ng01-314K10
Chromosome2 (Build37)
Map Location 21,429,414 - 21,430,537
singlet/doubletsinglet
Overlap geneGpr158
Upstream geneEtl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1
Downstream geneLOC637235, Myo3a, LOC100041703, Myo3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314K10.bB6Ng01-314K10.g
ACCGA105519GA105520
length1,1211,161
definitionB6Ng01-314K10.b B6Ng01-314K10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagccagcactttttggaggaaaaataaatgcaatgtataaga
agtggaaagacagaatgaatatgttatattatctgaggtgacaaaattgt
ttctagaaattatttttaaaaaatcaccaactgttagaataaaaggtcca
gctcattgttccagagtaacaaaccacatgataataaacaaacaaacaaa
caaacaaactgaaaggtgttctagtgccaccaaacatctaagaactataa
ataaatatagcaaagcatgcgctggacgctaacaggaagtcacagtgtgc
cgccgatagaagctaaagaaaatcaaggaaactgtgaaagccttacaggg
tcctctattttaaccaggtatgcatttttaaatctcattttataatttat
ataaatgtgaggaataattaaaacaattgagagaaagttgagctgttaat
acaaaagatctgatgaatgggcacaaagacagaaaataaagcaagtggac
aatactgaccagagattgagagacaaatcagactgatcccaaaactgtat
aagatagagactgtaatcagctgatcatgtgagaaataaacatattgtac
tgtgtttcatatctgcacagagatcaactccatgtgggtcaaaagtagca
aaaaagtcatctcaggcacagcacacataaaaaataaaagaaaatctctt
tcaaccagatataattatcaggatgagaacacatttcaatatctatgaca
agggacatatatgtggaatactgcctataaactgataatgacaagaaaat
ggattttgaaaaataagtcaagtgatttgagaaatgcccaacagtgggaa
tatgggacctgaagaggccacctccaggaactagacaggacccccagtag
agggatagggacaccaacccacctaaaaaaacttttgacccaaaattggg
tcctgcattaaaaataaatgcagggacaaagatagagcagaaaccaaaag
gaatgccacccagtgaccaacccatcttgagacccattcccatgtgcagc
acatcccagaacactatttagtgattctatcttgtgctacaccaaaggac
aacctaccccatccttttctc
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgagggaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggtcccaaatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtgggatgctcacagtcagctaatggatggatcatagggctcc
caatggaggagctagagaaagtagccaaggagctaaggatctgcacctat
aggtggaacaacattatgactaccagtaccccggagctcttgactctagc
ctgcatatgtatccaagaatgggccttagtccgtccatccacttggaaga
agagtcattgacttgcacttttatatgcccagtacaggggggaaacatca
agggtgctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21429414_21430537
seq2: B6Ng01-314K10.b_47_1167 (reverse)

seq1  GAGAAAAGGGAAGGGGGAAGGGTTGTCCTTTGGTTGGTAGCACAAGATAG  50
      |||||||||  | |||| | ||||||||||||||  ||||||||||||||
seq2  GAGAAAAGG--ATGGGGTA-GGTTGTCCTTTGGT--GTAGCACAAGATAG  45

seq1  AATCACT-AATAGTG-TCTGGGATTGGTGCCTGCACATGGG-ATGGGTCT  97
      ||||||| ||||||| ||||||||  ||| ||||||||||| ||||||||
seq2  AATCACTAAATAGTGTTCTGGGAT--GTG-CTGCACATGGGAATGGGTCT  92

seq1  CAAGATGGGTTGGTCACTGGTTGGCATTCC-TTTGGTTTCTGCTCTATCT  146
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  CAAGATGGGTTGGTCACTGGGTGGCATTCCTTTTGGTTTCTGCTCTATCT  142

seq1  TTGTCCCTGCATTTATTTTTAATGCAGGA-CCAATTTTGGGTCAAAAGTT  195
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGTCCCTGCATTTATTTTTAATGCAGGACCCAATTTTGGGTCAAAAGTT  192

seq1  TTTTTAGGTGGGTTGGTGTCCCTATCCCTCTACTGGGGGTCCTGTCTAGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGTGGGTTGGTGTCCCTATCCCTCTACTGGGGGTCCTGTCTAGT  242

seq1  TCCTGGAGGTGGCCTCTTCAGGTCCCATATTCCCACTGTTGGGCATTTCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAGGTGGCCTCTTCAGGTCCCATATTCCCACTGTTGGGCATTTCT  292

seq1  CAAATCACTTGACTTATTTTTCAAAATCCATTTTCTTGTCATTATCAGTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACTTGACTTATTTTTCAAAATCCATTTTCTTGTCATTATCAGTT  342

seq1  TATAGGCAGTATTCCACATATATGTCCCTTGTCATAGATATTGAAATGTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCAGTATTCCACATATATGTCCCTTGTCATAGATATTGAAATGTG  392

seq1  TTCTCATCCTGATAATTATATCTGGTTGAAAGAGATTTTCTTTTATTTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCCTGATAATTATATCTGGTTGAAAGAGATTTTCTTTTATTTTT  442

seq1  TATGTGTGCTGTGCCTGAGATGACTTTTTTGCTACTTTTGACCCACATGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGCTGTGCCTGAGATGACTTTTTTGCTACTTTTGACCCACATGG  492

seq1  AGTTGATCTCTGTGCAGATATGAAACACAGTACAATATGTTTATTTCTCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATCTCTGTGCAGATATGAAACACAGTACAATATGTTTATTTCTCA  542

seq1  CATGATCAGCTGATTACAGTCTCTATCTTATACAGTTTTGGGATCAGTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCAGCTGATTACAGTCTCTATCTTATACAGTTTTGGGATCAGTCT  592

seq1  GATTTGTCTCTCAATCTCTGGTCAGTATTGTCCACTTGCTTTATTTTCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCTCTCAATCTCTGGTCAGTATTGTCCACTTGCTTTATTTTCTG  642

seq1  TCTTTGTGCCCATTCATCAGATCTTTTGTATTAACAGCTCAACTTTCTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGCCCATTCATCAGATCTTTTGTATTAACAGCTCAACTTTCTCT  692

seq1  CAATTGTTTTAATTATTCCTCACATTTATATAAATTATAAAATGAGATTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTTTTAATTATTCCTCACATTTATATAAATTATAAAATGAGATTT  742

seq1  AAAAATGCATACCTGGTTAAAATAGAGGACCCTGTAAGGCTTTCACAGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCATACCTGGTTAAAATAGAGGACCCTGTAAGGCTTTCACAGTT  792

seq1  TCCTTGATTTTCTTTAGCTTCTATCGGCGGCACACTGTGACTTCCTGTTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGATTTTCTTTAGCTTCTATCGGCGGCACACTGTGACTTCCTGTTA  842

seq1  GCGTCCAGCGCATGCTTTGCTATATTTATTTATAGTTCTTAGATGTTTGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCCAGCGCATGCTTTGCTATATTTATTTATAGTTCTTAGATGTTTGG  892

seq1  TGGCACTAGAACACCTTTCAGTTTGTTTGTTTGTTTGTTTGTTTATTATC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTAGAACACCTTTCAGTTTGTTTGTTTGTTTGTTTGTTTATTATC  942

seq1  ATGTGGTTTGTTACTCTGGAACAATGAGCTGGACCTTTTATTCTAACAGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTTGTTACTCTGGAACAATGAGCTGGACCTTTTATTCTAACAGT  992

seq1  TGGTGATTTTTTAAAAATAATTTCTAGAAACAATTTTGTCACCTCAGATA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATTTTTTAAAAATAATTTCTAGAAACAATTTTGTCACCTCAGATA  1042

seq1  ATATAACATATTCATTCTGTCTTTCCACTTCTTATACATTGCATTTATTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACATATTCATTCTGTCTTTCCACTTCTTATACATTGCATTTATTT  1092

seq1  TTCCTCCAAAAAGTGCTGGCTAGGAATTC  1124
      |||||||||||||||||||||||||||||
seq2  TTCCTCCAAAAAGTGCTGGCTAGGAATTC  1121