BAC Information

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BAC

Clone NameB6Ng01-314L15
Chromosome2 (Build37)
Map Location 134,721,181 - 134,722,326
singlet/doubletsinglet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314L15.bB6Ng01-314L15.g
ACCGA105571GA105572
length1,152716
definitionB6Ng01-314L15.b B6Ng01-314L15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagcatgcatcaaggctcacaatcatctgtaactgcatgtctc
tgttgcctggtattgactttctagtgtctactgatgctgatgtttatggt
taaaaatctcactttcggctaggtgtattggaccaccaggaactcccaga
actaggtaagcggaagcaggaggatcttgagtttacatttgggcagctat
gctggctagttttatttcaaattatcatcaattgagaaaatgtttccata
agatccagatataagcattttcttagtgattgatggtggaggccgcccat
cccattgtgagcagtaccatccatgagctgattgtcctgggttctatgag
aaagcaggctcagcaagctatgaggagcaagtcagccaccagcacccctc
agtggcttctgtgtaagctgctgcctccaggttcctgcccttcttgagtt
tctaccctcattgcttttgatgatgagctgttctgtggaatgatgagtga
aataaaccctttccttccccaagttgctttggtcatggtatttcatcata
gcataacaaaccaaacccatgtcttgcagtatgtctcaaaatgaatagtt
tgttgtaaggtctgtggttgtagatcaacacatgctcaggtcttaggttt
agtcccaggaccatgaagtgggagttaataaaacagagcaaaaccaaatg
taacttctgatccttccctttttgaaagtgagatctgtttaagattctta
tttctgtcaatagtatatgaaataattgatctaagtttttatcaactgtc
tgagtcatagagagacattaaagaattagagagctgctgttacataactg
gcctcaatcccatcttgtacccttttactgagagagcaaacaaacctacg
caaatatggaagaaattagccaccgcctttgccaacccccatgctactca
ctcagaagaacgtattgttgttcatgggtacaggctgggaatgctaaaca
tttcttaagcaggggcttgtgttccctgcccctgctactgtgttttgttt
tctgttttaaaacttttctttatgaagaaggtttatggcaagttggtagc
cagaattcctctagaacttctcccaagtgagctgctgagtgttgggaagg
aa

gaattcttgtctgttattataaacttagttcaaagcctatagttggtgat
atcatgggcaatgggggcagggaaaccaggctgctgttatttcaattaat
tcacatggcatcaaactgtgttgtgtttatgcttctattccttgcaattc
ttgctattctcagtctcagtcagattagcttctctttgcagtgaatgcag
caactcctggcttcttaaaatgctgaggataagcaactgttgggtgctca
gcactccaaggacctctatcctgtgccctctaaggttcagagagcatcac
ccaagaagaaacagaaagaatgcaggagctgtatgatggggaggagggat
gcaaaatgttgtcttctgggtatgacacagactttgcaatgaaaatactc
acagcagctcttatacacacgggggcctgcacaaagctgggcctggcaac
agttatggatgggaagggaatcctgggggcactggtctctcaggaactac
ttactggctacaggtgaatgctaaggaagagtgaatcattctctaaagtg
tgtgtccactcgtgagcctatcaggttctactggagagttctgtactctt
tgccatataatggcccccattaagcttagtcatcacaaatcaagagcaca
ggacatgaaagtgggaaaagacttctagggaaaaatgcttggtgggaggg
agtgtgagggagaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134721181_134722326
seq2: B6Ng01-314L15.b_45_1196

seq1  GAATTCTTAGCATGCATCAAGGCTCACAATCATCTGTAACTGCATGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCATGCATCAAGGCTCACAATCATCTGTAACTGCATGTCTC  50

seq1  TGTTGCCTGGTATTGACTTTCTAGTGTCTACTGATGCTGATGTTTATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCTGGTATTGACTTTCTAGTGTCTACTGATGCTGATGTTTATGGT  100

seq1  TAAAAATCTCACTTTCGGCTAGGTGTATTGGACCACCAGGAACTCCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCTCACTTTCGGCTAGGTGTATTGGACCACCAGGAACTCCCAGA  150

seq1  ACTAGGTAAGCGGAAGCAGGAGGATCTTGAGTTTACATTTGGGCAGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTAAGCGGAAGCAGGAGGATCTTGAGTTTACATTTGGGCAGCTAT  200

seq1  GCTGGCTAGTTTTATTTCAAATTATCATCAATTGAGAAAATGTTTCCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTAGTTTTATTTCAAATTATCATCAATTGAGAAAATGTTTCCATA  250

seq1  AGATCCAGATATAAGCATTTTCTTAGTGATTGATGGTGGAGGCCGCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAGATATAAGCATTTTCTTAGTGATTGATGGTGGAGGCCGCCCAT  300

seq1  CCCATTGTGAGCAGTACCATCCATGAGCTGATTGTCCTGGGTTCTATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGTGAGCAGTACCATCCATGAGCTGATTGTCCTGGGTTCTATGAG  350

seq1  AAAGCAGGCTCAGCAAGCTATGAGGAGCAAGTCAGCCACCAGCACCCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGCTCAGCAAGCTATGAGGAGCAAGTCAGCCACCAGCACCCCTC  400

seq1  AGTGGCTTCTGTGTAAGCTGCTGCCTCCAGGTTCCTGCCCTTCTTGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTTCTGTGTAAGCTGCTGCCTCCAGGTTCCTGCCCTTCTTGAGTT  450

seq1  TCTACCCTCATTGCTTTTGATGATGAGCTGTTCTGTGGAATGATGAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTCATTGCTTTTGATGATGAGCTGTTCTGTGGAATGATGAGTGA  500

seq1  AATAAACCCTTTCCTTCCCCAAGTTGCTTTGGTCATGGTATTTCATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACCCTTTCCTTCCCCAAGTTGCTTTGGTCATGGTATTTCATCATA  550

seq1  GCATAACAAACCAAACCCATGTCTTGCAGTATGTCTCAAAATGAATAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAACAAACCAAACCCATGTCTTGCAGTATGTCTCAAAATGAATAGTT  600

seq1  TGTTGTAAGGTCTGTGGTTGTAGATCAACACATGCTCAGGTCTTAGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAAGGTCTGTGGTTGTAGATCAACACATGCTCAGGTCTTAGGTTT  650

seq1  AGTCCCAGGACCATGAAGTGGGAGTTAATAAAACAGAGCAAAACCAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGGACCATGAAGTGGGAGTTAATAAAACAGAGCAAAACCAAATG  700

seq1  TAACTTCTGATCCTTCCCTTTTTGAAAGTGAGATCTGTTTAAGATTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTGATCCTTCCCTTTTTGAAAGTGAGATCTGTTTAAGATTCTTA  750

seq1  TTTCTGTCAATAGTATATGAAATAATTGATCTAAGTTTTTATCAACTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCAATAGTATATGAAATAATTGATCTAAGTTTTTATCAACTGTC  800

seq1  TGAGTCATAGAGAGACATTAAAGAATTAGAGAGCTGCTGTTACATAACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATAGAGAGACATTAAAGAATTAGAGAGCTGCTGTTACATAACTG  850

seq1  GCCTCAATCCCATCTTGTACCCTTTTACTGAGAGAGCAAACAAACCTACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAATCCCATCTTGTACCCTTTTACTGAGAGAGCAAACAAACCTACG  900

seq1  CAAATATGGAAGAAATTAGCCACCGCCTTTGCCAACCCCCATGCTACTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGGAAGAAATTAGCCACCGCCTTTGCCAACCCCCATGCTACTCA  950

seq1  CTCAGAAGAACGTATTGTTGTTCAT-GGTACAGGCTGGGAATGCTAAACA  999
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTCAGAAGAACGTATTGTTGTTCATGGGTACAGGCTGGGAATGCTAAACA  1000

seq1  -TTCTTAAGCCAGGGCCTTGTGTTCCCTG-CCCTGCTACTGTGTTTTGTT  1047
       |||||||| ||||| ||||||||||||| ||||||||||||||||||||
seq2  TTTCTTAAG-CAGGGGCTTGTGTTCCCTGCCCCTGCTACTGTGTTTTGTT  1049

seq1  TTCTGTTTTAAAACTTTTCTTTATG-AGAAGGTTTATGGCAAG-TGGTAG  1095
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  TTCTGTTTTAAAACTTTTCTTTATGAAGAAGGTTTATGGCAAGTTGGTAG  1099

seq1  GCAGGATT-CTCTAGA--CTCTCCC-AGTGAGCCTGCTGGAGGTGTGGGA  1141
       ||| ||| |||||||   |||||| |||||| ||||| |||   |||||
seq2  CCAGAATTCCTCTAGAACTTCTCCCAAGTGAG-CTGCT-GAGTGTTGGGA  1147

seq1  AGGAA  1146
      |||||
seq2  AGGAA  1152


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