BAC Information

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BAC

Clone NameB6Ng01-314M02
Chromosome2 (Build37)
Map Location 162,741,243 - 162,881,044
singlet/doubletdoublet
Overlap geneSfrs6, L3mbtl, LOC241765, Sgk2, Ift52, Mybl2
Upstream genePtprt, LOC100043895, LOC100043896, LOC100043696, LOC497655, LOC668947
Downstream gene2410116G06Rik, LOC269389, Jph2, 3230401D17Rik, LOC100043708, Gdap1l1, D930001I22Rik, LOC100043899, Hnf4a, 5830472M02Rik, Serinc3, Pkig, Ada, Wisp2, Kcnk15, Rims4, Ywhab, LOC381404, Tomm34
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314M02.bB6Ng01-314M02.g
ACCGA105589GA105590
length1,1261,125
definitionB6Ng01-314M02.b B6Ng01-314M02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(162,879,919 - 162,881,044)(162,741,243 - 162,742,361)
sequence
gaattccccgtctcgcatcccgcggagggcccaggggctttgtgcttccc
ggaatgctaacaagaaaggaacgccagcaaattcgagccactcttgatcg
acaagtgtctcccaggcttctgccttccactcgctgcgacaaggggagac
attctccctacccagtaatgggcctccagctgacaccgcgagcgacagcc
ttccttccccaccctgcaattaggcgggagatgatggacctcacccaggg
ctgggacccggtctagagggggaacccgcgctttcagactcccgggccca
ggaggcccaggaaccgagcgagggggtcccgatagcctcttaacgtggcg
cgcgcccctgcatcgggcggcgcagggtgcatttctcccggggatcccca
tctcacgcttgccgacccaaggagaagggagaggaccccagcgcgcccgc
agcctctcaccagcgcgtccgccgagacatccccccggcccggaccccgc
cgcacccttacgcccgccggccgagcccggagcgggagccgggccggggt
caggactcaggctgctcgagccgctccgggccccaggcggtgctctcagg
cgtcagcgtgtctgcaggtctggtcgcacgttcccaggaactgcagctgc
ctagggagcgcacagaaccactttcctatctcccgccaagtgcgtcggcg
ccgcccggccctggcgcgcgagcgcaggggcggagcatacggaaggggcg
aagcgtacaagacacgaggggcggagcccgcgcgccagaaccctaggagg
ggcctactgtaggggcggagcccaagcatggggaagaggggagtggttta
ccggagggcagaaaccgaatgtgcaagcgggcagatgctctgttagtttg
gcaatctactgtgtccagatacacctaccttagggattcaatgaggcgcg
aggcctggctctgtgtgaatctttagatagaccccgagccacacacatag
caaaggactggagactgaataggagaaactttcccgcccaatgtcactgc
cttgggaacgttcaaggtcactatcctaagagccccaatgctcctttgac
tgattgctatctttttccttgcaagc
gaattcttactgtggctgctgggaactgcactcaggccctcaagagcgtg
ccgcaagagcttcatctccccctgccctcttccacgtttaagagaagtat
aggtacacacacacacacacaccgcaacatcaagaggccatatctcagct
tggagtctgtctagagagcgcagctttaaaagctgacctgctgtaagcct
ttaatcccagcactcgggaggcagcctggtctacagagtgagctccaaga
gaaccagggccacatacagaaagcctgtctcaaaaacaaaacaaaacata
ccagcctcgcttgattccaaaactttccctttccatattaagggcagagc
ttggaggtacgagcctagagtttctagtaagcagccatgaggtgagattt
agcgagatcaggaatgtatcccacccacaagaagatggtgaaacaacgga
aagactgtgagaacgcgtggccaggagaaaggcgtttgcctgaatccctt
ggggacacctcccgtaggcctggtgccaatgttggaaggtggggagctag
aaaaccaccagcgaagggataaaaaagccagggagtgctccacacagctg
aagctctaaggctatgccacggggtttcccaagccaccgcgcagagaaaa
ggctgcaatacagagtttaatttaaaaaaaaaaaaaaatcgtcaattcta
caagcccaaagggatgaaagaggtctgtgttgggacaagaatgtatacag
atgtgggaggattctgagacatgaaaggaaagagagtcacagaagtagcc
actggtgtctgctgggagtcctggtggaagtagatgcaactgagcttata
ggaaagggcaagaagccatttttgactgccaaggcgaggcaatctgtagc
tcgtcagacaagtggggctggtcaccgcaagaatgtgtccaatttagcgg
tcttcttctgagctccttcacttaagatgccctgcccccacctcgtgacg
ctgcagatgctccactaacagctccgagcccctgccagacgtgggggtgc
ttgttgctctgaagtcatcctccagaacgatcaactaaatagaccctcta
tttctttggtgataccagtctgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_162879919_162881044
seq2: B6Ng01-314M02.b_47_1172 (reverse)

seq1  GCTTGCAAAGGAAAAGATACAAACCCAGTCAAAGGGAGCATGGGGGCTCT  50
      |||||||| | ||||||||  ||  |||||||| ||||||| ||||||||
seq2  GCTTGCAAGGAAAAAGATAGCAA-TCAGTCAAA-GGAGCATTGGGGCTCT  48

seq1  AGGGATAGTG-GCTTGGACCGTCCCAA-GCAGTGACAATTTGGGCGGG-A  97
        ||||||||  |||| ||  |||||| |||||||||  ||||||||| |
seq2  TAGGATAGTGACCTTGAACGTTCCCAAGGCAGTGACA--TTGGGCGGGAA  96

seq1  AGTTTCTCCTATTCAGTTCTTCCAGT-CTTTGCTATGTGTGTGGCTCGGG  146
      |||||||||||||||||   |||||| |||||||||||||||||||||||
seq2  AGTTTCTCCTATTCAGT--CTCCAGTCCTTTGCTATGTGTGTGGCTCGGG  144

seq1  GTCTATCT-AAGATTCACACAGAGCCAGGCCTCGCGCCTCATTGAATCCC  195
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCTAAAGATTCACACAGAGCCAGGCCTCGCGCCTCATTGAATCCC  194

seq1  TAAGGTAGGTGTATCTGGACACAGTAGATTGCC-AACTAACAGAGCATCT  244
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAGGTAGGTGTATCTGGACACAGTAGATTGCCAAACTAACAGAGCATCT  244

seq1  GCCCGCTTGCACATTCGGTTTCTGCCCTCCGGTAAACCACTCCCCTCTTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGCTTGCACATTCGGTTTCTGCCCTCCGGTAAACCACTCCCCTCTTC  294

seq1  CCCATGCTTGGGCTCCGCCCCTACAGTAGGCCCCTCCTAGGGTTCTGGCG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCTTGGGCTCCGCCCCTACAGTAGGCCCCTCCTAGGGTTCTGGCG  344

seq1  CGCGGGCTCCGCCCCTCGTGTCTTGTACGCTTCGCCCCTTCCGTATGCTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGGCTCCGCCCCTCGTGTCTTGTACGCTTCGCCCCTTCCGTATGCTC  394

seq1  CGCCCCTGCGCTCGCGCGCCAGGGCCGGGCGGCGCCGACGCACTTGGCGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCTGCGCTCGCGCGCCAGGGCCGGGCGGCGCCGACGCACTTGGCGG  444

seq1  GAGATAGGAAAGTGGTTCTGTGCGCTCCCTAGGCAGCTGCAGTTCCTGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGGAAAGTGGTTCTGTGCGCTCCCTAGGCAGCTGCAGTTCCTGGG  494

seq1  AACGTGCGACCAGACCTGCAGACACGCTGACGCCTGAGAGCACCGCCTGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCGACCAGACCTGCAGACACGCTGACGCCTGAGAGCACCGCCTGG  544

seq1  GGCCCGGAGCGGCTCGAGCAGCCTGAGTCCTGACCCCGGCCCGGCTCCCG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGGAGCGGCTCGAGCAGCCTGAGTCCTGACCCCGGCCCGGCTCCCG  594

seq1  CTCCGGGCTCGGCCGGCGGGCGTAAGGGTGCGGCGGGGTCCGGGCCGGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGGCTCGGCCGGCGGGCGTAAGGGTGCGGCGGGGTCCGGGCCGGGG  644

seq1  GGATGTCTCGGCGGACGCGCTGGTGAGAGGCTGCGGGCGCGCTGGGGTCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCTCGGCGGACGCGCTGGTGAGAGGCTGCGGGCGCGCTGGGGTCC  694

seq1  TCTCCCTTCTCCTTGGGTCGGCAAGCGTGAGATGGGGATCCCCGGGAGAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTCTCCTTGGGTCGGCAAGCGTGAGATGGGGATCCCCGGGAGAA  744

seq1  ATGCACCCTGCGCCGCCCGATGCAGGGGCGCGCGCCACGTTAAGAGGCTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCCTGCGCCGCCCGATGCAGGGGCGCGCGCCACGTTAAGAGGCTA  794

seq1  TCGGGACCCCCTCGCTCGGTTCCTGGGCCTCCTGGGCCCGGGAGTCTGAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGACCCCCTCGCTCGGTTCCTGGGCCTCCTGGGCCCGGGAGTCTGAA  844

seq1  AGCGCGGGTTCCCCCTCTAGACCGGGTCCCAGCCCTGGGTGAGGTCCATC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCGGGTTCCCCCTCTAGACCGGGTCCCAGCCCTGGGTGAGGTCCATC  894

seq1  ATCTCCCGCCTAATTGCAGGGTGGGGAAGGAAGGCTGTCGCTCGCGGTGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCGCCTAATTGCAGGGTGGGGAAGGAAGGCTGTCGCTCGCGGTGT  944

seq1  CAGCTGGAGGCCCATTACTGGGTAGGGAGAATGTCTCCCCTTGTCGCAGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGAGGCCCATTACTGGGTAGGGAGAATGTCTCCCCTTGTCGCAGC  994

seq1  GAGTGGAAGGCAGAAGCCTGGGAGACACTTGTCGATCAAGAGTGGCTCGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAAGGCAGAAGCCTGGGAGACACTTGTCGATCAAGAGTGGCTCGA  1044

seq1  ATTTGCTGGCGTTCCTTTCTTGTTAGCATTCCGGGAAGCACAAAGCCCCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGGCGTTCCTTTCTTGTTAGCATTCCGGGAAGCACAAAGCCCCT  1094

seq1  GGGCCCTCCGCGGGATGCGAGACGGGGAATTC  1126
      ||||||||||||||||||||||||||||||||
seq2  GGGCCCTCCGCGGGATGCGAGACGGGGAATTC  1126

seq1: chr2_162741243_162742361
seq2: B6Ng01-314M02.g_70_1194

seq1  GAATTCTTACTGTGGCTGCTGGGAACTGCACTCAGGCCCTCAAGAGCGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTGTGGCTGCTGGGAACTGCACTCAGGCCCTCAAGAGCGTG  50

seq1  CCGCAAGAGCTTCATCTCCCCCTGCCCTCTTCCACGTTTAAGAGAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAAGAGCTTCATCTCCCCCTGCCCTCTTCCACGTTTAAGAGAAGTAT  100

seq1  AGGTACACACACACACACACACCGCAACATCAAGAGGCCATATCTCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACACACACACACACACACCGCAACATCAAGAGGCCATATCTCAGCT  150

seq1  TGGAGTCTGTCTAGAGAGCGCAGCTTTAAAAGCTGACCTGCTGTAAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTGTCTAGAGAGCGCAGCTTTAAAAGCTGACCTGCTGTAAGCCT  200

seq1  TTAATCCCAGCACTCGGGAGGCAGCCTGGTCTACAGAGTGAGCTCCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCCAGCACTCGGGAGGCAGCCTGGTCTACAGAGTGAGCTCCAAGA  250

seq1  GAACCAGGGCCACATACAGAAAGCCTGTCTCAAAAACAAAACAAAACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGGGCCACATACAGAAAGCCTGTCTCAAAAACAAAACAAAACATA  300

seq1  CCAGCCTCGCTTGATTCCAAAACTTTCCCTTTCCATATTAAGGGCAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCGCTTGATTCCAAAACTTTCCCTTTCCATATTAAGGGCAGAGC  350

seq1  TTGGAGGTACGAGCCTAGAGTTTCTAGTAAGCAGCCATGAGGTGAGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGTACGAGCCTAGAGTTTCTAGTAAGCAGCCATGAGGTGAGATTT  400

seq1  AGCGAGATCAGGAATGTATCCCACCCACAAGAAGATGGTGAAACAACGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGATCAGGAATGTATCCCACCCACAAGAAGATGGTGAAACAACGGA  450

seq1  AAGACTGTGAGAACGCGTGGCCAGGAGAAAGGCGTTTGCCTGAATCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTGAGAACGCGTGGCCAGGAGAAAGGCGTTTGCCTGAATCCCTT  500

seq1  GGGGACACCTCCCGTAGGCCTGGTGCCAATGTTGGAAGGTGGGGAGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACACCTCCCGTAGGCCTGGTGCCAATGTTGGAAGGTGGGGAGCTAG  550

seq1  AAAACCACCAGCGAAGGGATAAAAAAGCCAGGGAGTGCTCCACACAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACCAGCGAAGGGATAAAAAAGCCAGGGAGTGCTCCACACAGCTG  600

seq1  AAGCTCTAAGGCTATGCCACGGGGTTTCCCAAGCCACCGCGCAGAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTAAGGCTATGCCACGGGGTTTCCCAAGCCACCGCGCAGAGAAAA  650

seq1  GGCTGCAATACAGAGTTTAATTTAAAAAAAAAAAAAAATCGTCAATTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAATACAGAGTTTAATTTAAAAAAAAAAAAAAATCGTCAATTCTA  700

seq1  CAAGCCCAAAGGGATGAAAGAGGTCTGTGTTGGGACAAGAATGTATACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCAAAGGGATGAAAGAGGTCTGTGTTGGGACAAGAATGTATACAG  750

seq1  ATGTGGGAGGATTCTGAGACATG-AAGGAAAGAGAGTCACAGAAGTAGCC  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGTGGGAGGATTCTGAGACATGAAAGGAAAGAGAGTCACAGAAGTAGCC  800

seq1  ACTGGTGTCTGCTGGGAGTCCTGGTGGAAGTAGATGCAACTGAGCTTATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTCTGCTGGGAGTCCTGGTGGAAGTAGATGCAACTGAGCTTATA  850

seq1  GGAAAGGGCAAGAAGCCATTTTTGACTGCCAAGGCGAGGCAATCTGTAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGCAAGAAGCCATTTTTGACTGCCAAGGCGAGGCAATCTGTAGC  900

seq1  TCGTCAGACAAGT-GGGCTGGTCACCGCAAGAATGTGTCCAATTTAGCGG  948
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCGTCAGACAAGTGGGGCTGGTCACCGCAAGAATGTGTCCAATTTAGCGG  950

seq1  TC-TCTTCTGAGCTCCTTCACTTAAAGATGCCCTG-CCCCACCTCGTGAC  996
      || |||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  TCTTCTTCTGAGCTCCTTCACTT-AAGATGCCCTGCCCCCACCTCGTGAC  999

seq1  GCTGCAGATGCT-CACTAACAGCTCCGAGGCCCCTGCCAGACGT--GGGT  1043
      |||||||||||| ||||||||||||||| |||||||||||||||  ||||
seq2  GCTGCAGATGCTCCACTAACAGCTCCGA-GCCCCTGCCAGACGTGGGGGT  1048

seq1  GCT--GTGCTCTTGAAGTCAATCTCCAGAACGATCAACTAAATAGA-CCT  1090
      |||   ||||| ||||||||  |||||||||||||||||||||||| |||
seq2  GCTTGTTGCTC-TGAAGTCATCCTCCAGAACGATCAACTAAATAGACCCT  1097

seq1  CTA-TTCTTTGTGGATTACCCAGTCTGTGG  1119
      ||| |||||||  |||   |||||||||||
seq2  CTATTTCTTTGGTGAT--ACCAGTCTGTGG  1125