BAC Information

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BAC

Clone NameB6Ng01-314M13
Chromosome2 (Build37)
Map Location 36,375,606 - 36,376,343
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341
Downstream geneOlfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2, Zbtb6, Zbtb26, Rabgap1, Gpr21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314M13.bB6Ng01-314M13.g
ACCGA105609GA105610
length1,1411,150
definitionB6Ng01-314M13.b B6Ng01-314M13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttagtgctatgtatttcttgtcagcactgttttcattgtgtc
ccataaatttgggtatgttgtgccttctttttcattgaattcaaggaaac
ctttaattttttatttcttatttgtcccagaggtcattcattagagagtt
tttcagtttccatgagtttgtaggcttttcattgtttttgttgttgttga
agtccagatttaattcacacagatctgataacatatagaggaatgtttca
atttttgttgtatctgttgagacttgttttctgagaaagtatattctaaa
tttttgagaagactacaataggttgtgagaggaaggcataggcttttatc
tttgggtgaaatgacctgtatatatctattaggtcctttggttaataacg
tattagttttattatttatctgtttagtttctgtctggatgacctgtcta
ttggtgagaatggggtattgaagcctcccatgacaaatgtctgagggttg
atatgtgttataaactttagtaatgtttcttttatgaatgtggatacctt
tgcatttggagcatagatattgagaattgagttgtgatcctggtggattt
ttcttttgatgcatgtgaaatatcctttccaatcattttttttttattaa
ttttggttgaaagtctatttggtagatattagaattgctataccatcttg
tttccatctggttggaaaatcttttctaacccttaatttttaggtaatat
atatctttgatgttgaaatgtgtttttttgtatgcaggagaatactggat
cctgttttcaccctcttagttttatttttttaaatatctcagatttcctg
gatgttttgtgtcaagaactttctagatataacatgttctatttttttgc
attaatatttttccctttcctattttcttcccttatgctctagctagaac
ttcactagaaatatgacactttgttcttgtgctcagtcataacaggtttt
ttttcattgtaccaggatgggtgggctattggccttgtcatagaagagtc
cttcattatgttgtgaatatgattccattctatcccttaggcatcaccaa
gcctctcaatcatgaagaattttgtattttccaaggtcctt
gaattctcacctgaggaatagcgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttctacaacaaatctggaaatcagtctgtcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctcttctgggc
atatatccagaagatgccccaactggtaataaggacacatgctccactat
gttcatagcagccttatttataatatccagaagctggaaaaaacccagat
gtccctcaacagagatggatacagaaaatgtgtaacatctacacaatgga
gtactctcagctattaaaaataatgaatttatgaaattcctagccaaatg
gatggacctggagggcatcatcctgagtgaggtaacacattcacaaagga
actcacacaatatgtactcagtgataagtggatattagcccaaaacctag
gatacccaagatataagatacaatttgctaaacacattaaactcaagaaa
aatgaagactgaagtgtggacactatgcccctccttagaagtggggacaa
aacacccatggaaggagttacagagacaaagtttggagctgagacgaaag
gatggaccatgtagagacttccatatccagggatccaccccataatcagc
atccaaacgctgacaccattgcatacactagcaagattttatcgaaagga
cccaggtgtagctgtctcttgtgagactatgccggggcctagcaacacag
aagtggatgctcacagtcagctaatggatggatcacagggctctcaatgg
agagctagagaaagtagcccaaggagaataaaggatctgcacccctatag
cgaacaacatttatgactaccagtaccccgggagctcttgactctagctg
catatgtatcaaaagattgcctagttcagtcaatcttttgcaagatagcc
aatggacacgctaactgtagaatgtccccaagtaccagggggggtaaagc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36375606_36376343
seq2: B6Ng01-314M13.b_441_1187

seq1  ATAACGTATTAGTTTTATTATTTATCTGTTTAGTTTCTGTCTGGATGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGTATTAGTTTTATTATTTATCTGTTTAGTTTCTGTCTGGATGACC  50

seq1  TGTCTATTGGTGAGAATGGGGTATTGAAGCCTCCCATGACAAATGTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATTGGTGAGAATGGGGTATTGAAGCCTCCCATGACAAATGTCTGA  100

seq1  GGGTTGATATGTGTTATAAACTTTAGTAATGTTTCTTTTATGAATGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGATATGTGTTATAAACTTTAGTAATGTTTCTTTTATGAATGTGGA  150

seq1  TACCTTTGCATTTGGAGCATAGATATTGAGAATTGAGTTGTGATCCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTGCATTTGGAGCATAGATATTGAGAATTGAGTTGTGATCCTGGT  200

seq1  GGATTTTTCTTTTGATGCATGTGAAATATCCTTTCCAATCATTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTCTTTTGATGCATGTGAAATATCCTTTCCAATCATTTTTTTTT  250

seq1  TATTAATTTTGGTTGAAAGTCTATTTGGTAGATATTAGAATTGCTATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTTTGGTTGAAAGTCTATTTGGTAGATATTAGAATTGCTATACC  300

seq1  ATCTTGTTTCCATCTGGTTGGAAAATCTTTTCTAACCCTTAATTTTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTTCCATCTGGTTGGAAAATCTTTTCTAACCCTTAATTTTTAGG  350

seq1  TAATATATATCTTTGATGTTGAAATGTGTTTTTTTGTATGCAGGAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATATCTTTGATGTTGAAATGTGTTTTTTTGTATGCAGGAGAATA  400

seq1  CTGGATCCTGTTTTCACCCTCTTAGTTTTATTTTTTTAAATATCTCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCCTGTTTTCACCCTCTTAGTTTTATTTTTTTAAATATCTCAGAT  450

seq1  TTCCTGGATGTTTTGTGTCAAGAACTTTCTAGATATAACATGTTCTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGATGTTTTGTGTCAAGAACTTTCTAGATATAACATGTTCTATTT  500

seq1  TTTTGCATTAATATTTTTTCCTTTCCTATTTTCTTCCCTTATGCTCTAGC  550
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTGCATTAATATTTTTCCCTTTCCTATTTTCTTCCCTTATGCTCTAGC  550

seq1  TAGAACTTCACTAGAAATATGACAACTTTG-TCTTGTGCTCAGTCAT-AC  598
      ||||||||||||||||||||||| |||||| |||||||||||||||| ||
seq2  TAGAACTTCACTAGAAATATGAC-ACTTTGTTCTTGTGCTCAGTCATAAC  599

seq1  AGTTTTTTTTTCA-TGTAACAAGATGG--TGGCTATTGG-CTTGTCATAG  644
      || |||||||||| |||| || |||||   ||||||||| ||||||||||
seq2  AGGTTTTTTTTCATTGTACCAGGATGGGTGGGCTATTGGCCTTGTCATAG  649

seq1  -AGAGT-CTTCATTATGTTGTG-ATATGATTC--ATCTATCCCT--AGCA  687
       ||||| ||||||||||||||| |||||||||   |||||||||   |||
seq2  AAGAGTCCTTCATTATGTTGTGAATATGATTCCATTCTATCCCTTAGGCA  699

seq1  TCACCAGTTTTTTTTTATCATGAAAGAATATTGTATTTTTCCAAGGTCCT  737
      ||||||     | |  |||||| |||||| ||||| ||||||||||||||
seq2  TCACCA-AGCCTCTCAATCATG-AAGAATTTTGTA-TTTTCCAAGGTCCT  746

seq1  T  738
      |
seq2  T  747