BAC Information

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BAC

Clone NameB6Ng01-314P18
Chromosome2 (Build37)
Map Location 140,641,588 - 140,738,181
singlet/doubletdoublet
Overlap genenone
Upstream geneTasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314P18.bB6Ng01-314P18.g
ACCGA105755GA105756
length1,1571,036
definitionB6Ng01-314P18.b B6Ng01-314P18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,737,011 - 140,738,181)(140,641,588 - 140,642,635)
sequence
gaattctttgggagccctgtgctctgggcttcctctataccatgcattct
gggttagggtgggaggtggaggtcagagcagccgcttacaccaagtgttc
tcatcttacaccaaaggaattggtattcccttttgtctagtttcctttcc
agtttaatgattataaggggtgattgctttcaactctgacccaagcaact
ccttgcacagttgaaaagctaacactataatcctgaagcttgcacttaaa
taaagttaacatagtaatcaccttttgttggtaaacagttgtgtttgatg
tatagactatatgttttcgaacgtcagaaatgtcttccctttttatttat
ttaacttagattattgagacagagtctcacgctatgttccaggttagcct
agaactcacaatgtagcccagccccacctggaactcatgggccctgatat
gcttcattgtcctagctgctgagattacaagtgtgtgtgcatctagcaaa
ggatccaggcttatataagaggcctctcgtaagagctgctttgattctgt
gggaagatcaaaaccagtgaggtggcagcagggcttagcggtcccggtca
tctccttcccttgtctttaattgcccacgaagaacagcagttctactaca
tttgtctatcaaattaaagcctgggccaagatttgcacatttggagcctc
tgctcaagtgggacaagtctctctctctctctgtgtgtcactctgaggaa
agagtcacgacatccttccttttctcttatgaaaccaatcgtgggcttga
acaatctgaattgagaataagagtgctgtttctgcttcctgatgcacacc
ccccccccccccaacagtcacctgcctgctttaaaagacagttcattatt
tcacatgtgaagaccacgtgctagttgtgtgcctgaaatttatatgggta
tgtcactagaaaacaatttcctttctgacagtttctgtatatttatatat
tgcagcatatagcactgtcagcagaaagataaatacagtcagtattttat
tgcaatgattgagaacatacatgattttctttatgaagtccacccaactg
tgagaacatttagtttattacatttgtgccacagccttatttgccaattt
acaatga

gaattcatgttctaggataacctaagcttcatgaaaaccagtctcaaaca
aacaaacaaacaaacaaacaaacaaatggttgaataaaataaaacagttt
tagaatgatatatttcaagccagttagaaaatcacatatttacttaatgt
agaattgaaaactccactgatgtctttatatttaagtcaaaagcagccaa
atggactcaaaacctcattcatatgacaaaacactttggttcaggttatt
tattgatggtcaaaagctaatactgatgtttctggcacccctaaaggtgt
atttttcatgataaaatttgattagttatagcacatatttcaataatttt
tactttaataattcattaaacatttaaacttgagaaacacatatgccctg
tgactcataaacattttgaaagatttgtctataaaattatcagtatcagt
ttttagacaacagatacaagtatatttatgaatgcactgttcattggtaa
tagaaaaaaatactggaaaccatccaagtagccatgtaataagagtggtt
ttatgcagacattatttttcaccaatctcttactttttagacctggctgg
tctagaatttggtatgtagacctgatggttctcaaatatcgagagatcca
cctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctc
tgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctg
cctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcc
tctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctc
tgcctcagtagtaggtttaaagccgaacactaccatacctttaaacttat
attgatatatgctattttctatagccataatattcgtgataagaaatatg
ttgcatagcactttatttgtatatacatagatactctttatatgtaatat
atttgtctcttacatgtatgtgtgactagaatagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140737011_140738181
seq2: B6Ng01-314P18.b_48_1204 (reverse)

seq1  TCATTTTTAAATTTGGCAAATAAGCTTGT-GCACAAATGTAATTTTAAAA  49
      ||||| |  || ||||||||||||  ||| |||||||||||||     ||
seq2  TCATTGT--AAATTGGCAAATAAGGCTGTGGCACAAATGTAAT-----AA  43

seq1  ATTAAATGTTCTCCACAGGTGGGTGGACTTCAT-AAGAAAATCATGTTAA  98
      | |||||||||| ||||| |||||||||||||| |||||||||||||  |
seq2  ACTAAATGTTCT-CACAGTTGGGTGGACTTCATAAAGAAAATCATGT--A  90

seq1  TG-TCTCAATTCAATGCAATAAAATTACCTGAACTTGTATTTATCTTTCT  147
      || |||||| ||| |||||||||||   ||||   |||||||||||||||
seq2  TGTTCTCAA-TCATTGCAATAAAAT--ACTGA--CTGTATTTATCTTTCT  135

seq1  GCTGAACAGTGCTTATAATGCTGCAATTATATAAATATACAGAAATTGTC  197
      |||| ||||||| ||| ||||||||| |||||||||||||||||| ||||
seq2  GCTG-ACAGTGC-TAT-ATGCTGCAA-TATATAAATATACAGAAACTGTC  181

seq1  AGAAAGGAAATTGTTTTCTAGTGACATACCCATATAAATTTCAGGCACAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAAATTGTTTTCTAGTGACATACCCATATAAATTTCAGGCACAC  231

seq1  AACTAGCACGTGGTCTTCACATTGTGAAATAATGAACTGTCTTTT-AAGC  296
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  AACTAGCACGTGGTCTTCACA-TGTGAAATAATGAACTGTCTTTTAAAGC  280

seq1  AGGCAGGTGACTGTT--GGGGGGGGGGGGTGTGCATCAGGAAGCAGAAAC  344
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  AGGCAGGTGACTGTTGGGGGGGGGGGGGGTGTGCATCAGGAAGCAGAAAC  330

seq1  AGCACTCTTATTCTCAATTCAGATTGTTCAAGCCCACGATTGGTTTCATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTTATTCTCAATTCAGATTGTTCAAGCCCACGATTGGTTTCATA  380

seq1  AGAGAAAAGGAAGGATGTCGTGACTCTTTCCTCAGAGTGACACACAGAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGGAAGGATGTCGTGACTCTTTCCTCAGAGTGACACACAGAGA  430

seq1  GAGAGAGAGACTTGTCCCACTTGAGCAGAGGCTCCAAATGTGCAAATCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGACTTGTCCCACTTGAGCAGAGGCTCCAAATGTGCAAATCTT  480

seq1  GGCCCAGGCTTTAATTTGATAGACAAATGTAGTAGAACTGCTGTTCTTCG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGGCTTTAATTTGATAGACAAATGTAGTAGAACTGCTGTTCTTCG  530

seq1  TGGGCAATTAAAGACAAGGGAAGGAGATGACCGGGACCGCTAAGCCCTGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAATTAAAGACAAGGGAAGGAGATGACCGGGACCGCTAAGCCCTGC  580

seq1  TGCCACCTCACTGGTTTTGATCTTCCCACAGAATCAAAGCAGCTCTTACG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCTCACTGGTTTTGATCTTCCCACAGAATCAAAGCAGCTCTTACG  630

seq1  AGAGGCCTCTTATATAAGCCTGGATCCTTTGCTAGATGCACACACACTTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCTCTTATATAAGCCTGGATCCTTTGCTAGATGCACACACACTTG  680

seq1  TAATCTCAGCAGCTAGGACAATGAAGCATATCAGGGCCCATGAGTTCCAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCAGCAGCTAGGACAATGAAGCATATCAGGGCCCATGAGTTCCAG  730

seq1  GTGGGGCTGGGCTACATTGTGAGTTCTAGGCTAACCTGGAACATAGCGTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCTGGGCTACATTGTGAGTTCTAGGCTAACCTGGAACATAGCGTG  780

seq1  AGACTCTGTCTCAATAATCTAAGTTAAATAAATAAAAAGGGAAGACATTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGTCTCAATAATCTAAGTTAAATAAATAAAAAGGGAAGACATTT  830

seq1  CTGACGTTCGAAAACATATAGTCTATACATCAAACACAACTGTTTACCAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGTTCGAAAACATATAGTCTATACATCAAACACAACTGTTTACCAA  880

seq1  CAAAAGGTGATTACTATGTTAACTTTATTTAAGTGCAAGCTTCAGGATTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGTGATTACTATGTTAACTTTATTTAAGTGCAAGCTTCAGGATTA  930

seq1  TAGTGTTAGCTTTTCAACTGTGCAAGGAGTTGCTTGGGTCAGAGTTGAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTAGCTTTTCAACTGTGCAAGGAGTTGCTTGGGTCAGAGTTGAAA  980

seq1  GCAATCACCCCTTATAATCATTAAACTGGAAAGGAAACTAGACAAAAGGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCACCCCTTATAATCATTAAACTGGAAAGGAAACTAGACAAAAGGG  1030

seq1  AATACCAATTCCTTTGGTGTAAGATGAGAACACTTGGTGTAAGCGGCTGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAATTCCTTTGGTGTAAGATGAGAACACTTGGTGTAAGCGGCTGC  1080

seq1  TCTGACCTCCACCTCCCACCCTAACCCAGAATGCATGGTATAGAGGAAGC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTCCACCTCCCACCCTAACCCAGAATGCATGGTATAGAGGAAGC  1130

seq1  CCAGAGCACAGGGCTCCCAAAGAATTC  1171
      |||||||||||||||||||||||||||
seq2  CCAGAGCACAGGGCTCCCAAAGAATTC  1157


seq1: chr2_140641588_140642635
seq2: B6Ng01-314P18.g_66_1101

seq1  GAATTCATGTTCTAGGATAACCTAAGCTTCATGAAAACCAGTCTCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTCTAGGATAACCTAAGCTTCATGAAAACCAGTCTCAAACA  50

seq1  AACAAACAAACAAACAAACAAACAAATGGTTGAATAAAATAAAACAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAACAAACAAATGGTTGAATAAAATAAAACAGTTT  100

seq1  TAGAATGATATATTTCAAGCCAGTTAGAAAATCACATATTTACTTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGATATATTTCAAGCCAGTTAGAAAATCACATATTTACTTAATGT  150

seq1  AGAATTGAAAACTCCACTGATGTCTTTATATTTAAGTCAAAAGCAGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAAAACTCCACTGATGTCTTTATATTTAAGTCAAAAGCAGCCAA  200

seq1  ATGGACTCAAAACCTCATTCATATGACAAAACACTTTGGTTCAGGTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTCAAAACCTCATTCATATGACAAAACACTTTGGTTCAGGTTATT  250

seq1  TATTGATGGTCAAAAGCTAATACTGATGTTTCTGGCACCCCTAAAGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGGTCAAAAGCTAATACTGATGTTTCTGGCACCCCTAAAGGTGT  300

seq1  ATTTTTCATGATAAAATTTGATTAGTTATAGCACATATTTCAATAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATGATAAAATTTGATTAGTTATAGCACATATTTCAATAATTTT  350

seq1  TACTTTAATAATTCATTAAACATTTAAACTTGAGAAACACATATGCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAATAATTCATTAAACATTTAAACTTGAGAAACACATATGCCCTG  400

seq1  TGACTCATAAACATTTTGAAAGATTTGTCTATAAAATTATCAGTATCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCATAAACATTTTGAAAGATTTGTCTATAAAATTATCAGTATCAGT  450

seq1  TTTTAGACAACAGATACAAGTATATTTATGAATGCACTGTTCATTGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGACAACAGATACAAGTATATTTATGAATGCACTGTTCATTGGTAA  500

seq1  TAGAAAAAAATACTGGAAACCATCCAAGTAGCCATGTAATAAGAGTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAAATACTGGAAACCATCCAAGTAGCCATGTAATAAGAGTGGTT  550

seq1  TTATGCAGACATTATTTTTCACCAATCTCTTACTTTTTAGACCTGGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAGACATTATTTTTCACCAATCTCTTACTTTTTAGACCTGGCTGG  600

seq1  TCTAGAATTTGGTATGTAGACCTGATGGTTCTCAAATATCGAGAGATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAATTTGGTATGTAGACCTGATGGTTCTCAAATATCGAGAGATCCA  650

seq1  CCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC  700

seq1  TGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG  750

seq1  CCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCC  800

seq1  TCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC  850

seq1  TGCCTCAAGTAGTAGGTTTAAAGCCGAACACTACCATACCTTTAAACTTA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTC-AGTAGTAGGTTTAAAGCCGAACACTACCATACCTTTAAACTTA  899

seq1  TATTGATATATGCTATTTTCTTATAGCCATAAATATTCGTGAATAAGAAA  950
      |||||||||||||||||||| ||||||||| |||||||||| ||||||||
seq2  TATTGATATATGCTATTTTC-TATAGCCAT-AATATTCGTG-ATAAGAAA  946

seq1  ATTATGTTGCATAGCAACTTTATTTTGTAATAATACATAGATACTTCTTT  1000
        ||||||||||||| |||||| ||||||   |||||||||||||   ||
seq2  --TATGTTGCATAGC-ACTTTA-TTTGTA--TATACATAGATACT--CTT  988

seq1  TATATGT-ATATATTTGTCTCTTACATGTATGTGTTGACTAGAATAGTC  1048
      ||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  TATATGTAATATATTTGTCTCTTACATGTATGTG-TGACTAGAATAGTC  1036


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