BAC Information

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BAC

Clone NameB6Ng01-315E15
Chromosome2 (Build37)
Map Location 99,474,096 - 99,475,142
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386
Downstream geneLOC668702, LOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315E15.bB6Ng01-315E15.g
ACCGA105978GA105979
length1,0771,161
definitionB6Ng01-315E15.b B6Ng01-315E15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggtatagttttcaagaataattttaaaacctgagatttttc
ccttatgaatctttatcgcttttattatttcaattgcattctttcttctt
ctaagagttccctaacaatagaagtgtagagaatggaatccttttcttgt
accttattttagcaaaagcaattacaatttctcccatttaattggctatg
agttagaaatatatagcatgtattatgaaaacatatattcttgttgtttc
caagtttcttcatggtattcatcacaaggaaattttgaatattaatacag
gcctcttttttattgagataattatgtggtttctatctttttatttatat
tgatttataagcgtatcgatatgcatatgtcgaaccgtgcatacattttt
gaatgcacctaattggttcttgaaatattaatcccttagtatgctcttct
attcattttgcaaacagtatttttttttctgtttgaatttttatttattg
ggcataactgcctaaattttgctttcttttttatatggaagatgggaatg
taagaatgagatttccctttttattttatttaaattttaggagaatttct
tttagcttttaaaaagatatgaggaatttttcagtgaatctatctgtgtt
tgcattttcgtctggttctttactatgttaatatataacttatttatata
tctttcattattttggtaggtattatgtgtttggaatttcatttggatat
gacatgtttttacttatgaattttcgatttttactgatgagcttctatat
ttaattgaaatctcttataatatgtcattttaatttgattttttttctct
tttggtgacaattgctagaggttaagcaattatttaaatacttagagaaa
tattaggaaaacctattgcttttccttctttttttttgctaaaggtgttt
aatagtttaggataaaattagaaagctgatagtatccccaaaccatgctc
ttggtgatatttttattcattttctttcagaggcattatagatttactac
atattggtcatttttatttcatctttg

gaattccttatccattgtcatggtattccacaaagcattgcttcttatgc
attgtcgtggtattccacaaagcattgcttctgagcaaggaattcacttc
agatcagagaagtatgacaatgagtccatgatcatgaaattaactagtct
taccatatggaaaggcttttgaagacacagtgccaattatgggacaatag
cctagagggctgaggcagagttatccagaaggtagtaaataattttaatc
agtatttaatgcgtggtaccatttctcttatatccagaattcacagggtc
agaaatcaagtagtggaaatagagtaattctatacactataaccactagg
aaaacaaacaaacaaacaaaaaacaaaacaaaaaaaaaaaaaaactagaa
tacattttgattcctgtttccatgacttttatttttgctatcagagaagc
actggtttcacaaaaagaaacgtttataccatgagaaataaccaaccaac
attccactggaatagaatctcagaacccccccccaccccatcccccaccc
ccactcctgctcacttaggaatgctaatgtcttagggtcagcaagctcag
aagacagaggtagacaggatggcattacagattaccatggagaaattgat
gacagtcaatacgtaccctgtgatcaaagtcaatgggaaatgacaacaac
ctaatccagaaagaatgacaaagggtacaaacccaacaaaaatgaaggca
agaacactcctccttcaggaaaagagccaagatctggtaaggtgcttggt
gaaggtggaggaactgcacagtgattagtaaaggaaggttattataaata
agatcaagtgagcaattcagaaaaagggattgtgattgacatatttctgt
cacaaattctttaaaatgtgtttgtaacaacatgttttctttctttgtca
tgtaaagtaacattaattaaaagaatatcatggttatcatattacttttg
agattctaaagattagctttaaaaacatctattctaaataataaatgtat
tgtgaatggatgtgtataggtcatgtcagaccatgtataactagcttttt
tgcctggcaactaagccattaggcattatgaaagtgttctcctgatccat
atgggagcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99474096_99475142
seq2: B6Ng01-315E15.b_81_1122

seq1  AACCTGAGATTTTTCCCTTATGAATCTTTATCGCTTTTATTATTTCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAGATTTTTCCCTTATGAATCTTTATCGCTTTTATTATTTCAATT  50

seq1  GCATTCTTTCTTCTTCTAAGAGTTCCCTAACAATAGAAGTGTAGAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTCTTCTTCTAAGAGTTCCCTAACAATAGAAGTGTAGAGAATG  100

seq1  GAATCCTTTTCTTGTACCTTATTTTAGCAAAAGCAATTACAATTTCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTTTTCTTGTACCTTATTTTAGCAAAAGCAATTACAATTTCTCCC  150

seq1  ATTTAATTGGCTATGAGTTAGAAATATATAGCATGTATTATGAAAACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTGGCTATGAGTTAGAAATATATAGCATGTATTATGAAAACATA  200

seq1  TATTCTTGTTGTTTCCAAGTTTCTTCATGGTATTCATCACAAGGAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGTTGTTTCCAAGTTTCTTCATGGTATTCATCACAAGGAAATTT  250

seq1  TGAATATTAATACAGGCCTCTTTTTTATTGAGATAATTATGTGGTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTAATACAGGCCTCTTTTTTATTGAGATAATTATGTGGTTTCTA  300

seq1  TCTTTTTATTTATATTGATTTATAAGCGTATCGATATGCATATGTCGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATTTATATTGATTTATAAGCGTATCGATATGCATATGTCGAAC  350

seq1  CGTGCATACATTTTTGAATGCACCTAATTGGTTCTTGAAATATTAATCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCATACATTTTTGAATGCACCTAATTGGTTCTTGAAATATTAATCCC  400

seq1  TTAGTATGCTCTTCTATTCATTTTGCAAACAGTATTTTTTTTTCTGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATGCTCTTCTATTCATTTTGCAAACAGTATTTTTTTTTCTGTTTG  450

seq1  AATTTTTATTTATTGGGCATAACTGCCTAAATTTTGCTTTCTTTTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATTTATTGGGCATAACTGCCTAAATTTTGCTTTCTTTTTTATA  500

seq1  TGGAAGATGGGAATGTAAGAATGAGATTTCCCTTTTTATTTTATTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATGGGAATGTAAGAATGAGATTTCCCTTTTTATTTTATTTAAAT  550

seq1  TTTAGGAGAATTTCTTTTAGCTTTTAAAAAGATATGAGGAATTTTTCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGAATTTCTTTTAGCTTTTAAAAAGATATGAGGAATTTTTCAGT  600

seq1  GAATCTATCTGTGTTTGCATTTTCGTCTGGTTCTTTACTATGTTAATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTATCTGTGTTTGCATTTTCGTCTGGTTCTTTACTATGTTAATATA  650

seq1  TAACTTATTTATATATCTTTCATTATTTTGGTAGGTATTATGTGTTTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATTTATATATCTTTCATTATTTTGGTAGGTATTATGTGTTTGGA  700

seq1  ATTTCATTTGGATATGACATGTTTTTACTTATGAATTTTCGATTTTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTGGATATGACATGTTTTTACTTATGAATTTTCGATTTTTACT  750

seq1  GATGAGCTTCTATATTTAATTGAAATCTCTTATAATATGTCATTTTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCTTCTATATTTAATTGAAATCTCTTATAATATGTCATTTTAATT  800

seq1  TGA-TTTTTTTCTCTTTTGGTGACAATTGCTAGAGGTTAAGCAATTATTT  849
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTCTCTTTTGGTGACAATTGCTAGAGGTTAAGCAATTATTT  850

seq1  AAATACTTAGAGAAATATTAGGAAAACCTATTGCTTTTCCTTC-TTTTTT  898
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAATACTTAGAGAAATATTAGGAAAACCTATTGCTTTTCCTTCTTTTTTT  900

seq1  TTGCTAAAGGTGGTTTAATAGTTTAGGATAAAAATTTAGAAAGCTGAATA  948
      ||||||||||| |||||||||||||||||||||  ||||||||||| |||
seq2  TTGCTAAAGGT-GTTTAATAGTTTAGGATAAAA--TTAGAAAGCTG-ATA  946

seq1  GTATCCCCAAACCATGCTCTT-GTGATATTTTTATTTCATTTCTTTCAGA  997
      ||||||||||||||||||||| ||||||||||||||   |||||||||||
seq2  GTATCCCCAAACCATGCTCTTGGTGATATTTTTATTCATTTTCTTTCAGA  996

seq1  AGCATTTAATAGATTTTAACTACATATTGGTCAATTTTATTTCATCTTTG  1047
       |||||  ||||||||  ||||||||||||||| ||||||||||||||||
seq2  GGCATT--ATAGATTT--ACTACATATTGGTCATTTTTATTTCATCTTTG  1042


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