BAC Information

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BAC

Clone NameB6Ng01-315F23
Chromosome2 (Build37)
Map Location 142,654,374 - 142,821,031
singlet/doubletdoublet
Overlap geneKif16b
Upstream geneLOC668913, LOC668914
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315F23.bB6Ng01-315F23.g
ACCGA106042GA106043
length4311,141
definitionB6Ng01-315F23.b B6Ng01-315F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,654,374 - 142,654,810)(142,819,900 - 142,821,031)
sequence
tcttaatttcatttttaaagaggaaagcgccaaaaaatacatcagcacta
taacatatggaatttgtaatgtgccagaccaaaagacatactgaggggtt
ctgtgcagctgtttcatgtatagctctaagcacaattccaatgggcatgg
tattgtaggtatgcaaaaggagaaccaatacaagcatactctaaagctct
tgatagccaggcttgaagaagctggattcatactaagaggcagtcggttg
tagttaaattcagccaacatgcaaatcacgtcgagatgggcttcctaaaa
gggatgagaaagatagacttaaaaggaaaaggaggggcatactgccctga
gaagctggtagtgcaccctgcagccaggtacaaacacacctgggcatcag
tcacagctaatcacagaatagaagctacttc
gaattctaggattataaagagaaggaggagttggcctagaaactgtcttt
gaaagtttttattctggtatagtaagaagttctgtaacactgtgtttaaa
attattcttatggtaaagaacagaaaggagccaaagccatctttgcttgg
tcttccactatctatctttgtcctattcttttgtcctccaacctccaact
catacttgccctttgttctcatcctttgttctctaccccaactcctacca
ccaaagagaaatgggatcaggaaggcgagtcttagaagggaggaatctta
cttccaacatccttgttatctgtcttggttaggtttccaagccacctcaa
acgctggagagagcttccatggtttgtaggaggcttcccagtggatacac
cagataccctctgaatttagagcaagtctcctaccagctggcattccagg
aagccctccacagcttctaaatcctgagacacacttgaaactacttctat
ctgaagatgctgtgtttcatggaagactactgaccccaaggcaactgcta
ctcaggacaatcatttctgtgagtagactgttcacagaaaaaaattgctc
tggtactgtttgtttgttagtttcttgacacggccactggagtaatttac
aaccaagcagaaagctacaacttctgcctttagcctggcttttctgtcaa
agctgtgggggtaaagatctatagtgaactactaagctgtcacaaaactg
tcaaatttaacacaatgagtggaaactagtcaggagttattacacatcta
ttatagcattttcagcacattaaagattaattttttagtctacctagatt
gagtcttccctataacatatatacatacatgtctgctgaaaccacatgat
ttgagaggtctatggatgcacatcagtatctttgtacgcatagatgcttg
ccttcttcttggtgcttccaaggccacatgatgggttagatttgtagaca
actctcatacaaacccagatgcacagcatcttctcaatttttctctggct
ctttaaatttagggtgtataatgttcatttgtttgcctcattttaaaatc
taagagaatggaaaggagtgtccttaagcagcaaccagcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142654374_142654810
seq2: B6Ng01-315F23.b_43_479

seq1  GAATTCTCTTAATTTCATTTTTAAAGAGGAAAGCGCCAAAAAATACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATTTCATTTTTAAAGAGGAAAGCGCCAAAAAATACATCA  50

seq1  GCACTATAACATATGGAATTTGTAATGTGCCAGACCAAAAGACATACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATAACATATGGAATTTGTAATGTGCCAGACCAAAAGACATACTGA  100

seq1  GGGGTTCTGTGCAGCTGTTTCATGTATAGCTCTAAGCACAATTCCAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCTGTGCAGCTGTTTCATGTATAGCTCTAAGCACAATTCCAATGG  150

seq1  GCATGGTATTGTAGGTATGCAAAAGGAGAACCAATACAAGCATACTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTATTGTAGGTATGCAAAAGGAGAACCAATACAAGCATACTCTAA  200

seq1  AGCTCTTGATAGCCAGGCTTGAAGAAGCTGGATTCATACTAAGAGGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGATAGCCAGGCTTGAAGAAGCTGGATTCATACTAAGAGGCAGT  250

seq1  CGGTTGTAGTTAAATTCAGCCAACATGCAAATCACGTCGAGATGGGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGTAGTTAAATTCAGCCAACATGCAAATCACGTCGAGATGGGCTTC  300

seq1  CTAAAAGGGATGAGAAAGATAGACTTAAAAGGAAAAGGAGGGGCATACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGGATGAGAAAGATAGACTTAAAAGGAAAAGGAGGGGCATACTG  350

seq1  CCCTGAGAAGCTGGTAGTGCACCCTGCAGCCAGGTACAAACACACCTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGAAGCTGGTAGTGCACCCTGCAGCCAGGTACAAACACACCTGGG  400

seq1  CATCAGTCACAGCTAATCACAGAATAGAAGCTACTTC  437
      |||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCACAGCTAATCACAGAATAGAAGCTACTTC  437

seq1: chr2_142819900_142821031
seq2: B6Ng01-315F23.g_66_1206 (reverse)

seq1  GTGCTGTTTGCTGC-TAAGG---CATCTTTCCATTCTCTTAGA-TTTAAA  45
      |||||| ||||||| |||||   |  ||||||||||||||||| ||||||
seq2  GTGCTGGTTGCTGCTTAAGGACACTCCTTTCCATTCTCTTAGATTTTAAA  50

seq1  ATGA-GCAAAC-AATAGACATTATACA-CCTAAATTAAAGAAGCAAGAGA  92
      |||| |||||| |||  |||||||||| |||||||| ||  ||| |||||
seq2  ATGAGGCAAACAAATGAACATTATACACCCTAAATTTAAAGAGCCAGAGA  100

seq1  AAAA-TGAGAAGATGCTGTGCATCT-GGTTTGTATGAGAGTTGTCTACAA  140
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAATTGAGAAGATGCTGTGCATCTGGGTTTGTATGAGAGTTGTCTACAA  150

seq1  ATCTAACCCATCATGGTGGCCTTGGAGGCACCAAGAAGAAGGCAAGCATC  190
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  ATCTAACCCATCAT-GTGGCCTTGGAAGCACCAAGAAGAAGGCAAGCATC  199

seq1  TATGCGTACAAAGATACTGATGTGCATCCATAGACCTCTCAAATCATGTG  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCGTACAAAGATACTGATGTGCATCCATAGACCTCTCAAATCATGTG  249

seq1  GTTTCAGCAGACATGTATGTATATATGTTTATAGGGAAGACTCAATCTAG  290
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTTTCAGCAGACATGTATGTATATATG-TTATAGGGAAGACTCAATCTAG  298

seq1  GTAGACT-AAAAATTAATCTTTAATGTGCTGAAAATGCTATAATAGATGT  339
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTAAAAAATTAATCTTTAATGTGCTGAAAATGCTATAATAGATGT  348

seq1  GTAATAACTCCTGACTAGTTTCCACTCATTGTGTTAAATTTGACAGTTTT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAACTCCTGACTAGTTTCCACTCATTGTGTTAAATTTGACAGTTTT  398

seq1  GTGACAGCTTAGTAGTTCACTATAGATCTTTACCCCCACAGCTTTGACAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCTTAGTAGTTCACTATAGATCTTTACCCCCACAGCTTTGACAG  448

seq1  AAAAGCCAGGCTAAAGGCAGAAGTTGTAGCTTTCTGCTTGGTTGTAAATT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCAGGCTAAAGGCAGAAGTTGTAGCTTTCTGCTTGGTTGTAAATT  498

seq1  ACTCCAGTGGCCGTGTCAAGAAACTAACAAACAAACAGTACCAGAGCAAT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGTGGCCGTGTCAAGAAACTAACAAACAAACAGTACCAGAGCAAT  548

seq1  TTTTTTCTGTGAACAGTCTACTCACAGAAATGATTGTCCTGAGTAGCAGT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTGTGAACAGTCTACTCACAGAAATGATTGTCCTGAGTAGCAGT  598

seq1  TGCCTTGGGGTCAGTAGTCTTCCATGAAACACAGCATCTTCAGATAGAAG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGGGTCAGTAGTCTTCCATGAAACACAGCATCTTCAGATAGAAG  648

seq1  TAGTTTCAAGTGTGTCTCAGGATTTAGAAGCTGTGGAGGGCTTCCTGGAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCAAGTGTGTCTCAGGATTTAGAAGCTGTGGAGGGCTTCCTGGAA  698

seq1  TGCCAGCTGGTAGGAGACTTGCTCTAAATTCAGAGGGTATCTGGTGTATC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCTGGTAGGAGACTTGCTCTAAATTCAGAGGGTATCTGGTGTATC  748

seq1  CACTGGGAAGCCTCCTACAAACCATGGAAGCTCTCTCCAGCGTTTGAGGT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGAAGCCTCCTACAAACCATGGAAGCTCTCTCCAGCGTTTGAGGT  798

seq1  GGCTTGGAAACCTAACCAAGACAGATAACAAGGATGTTGGAAGTAAGATT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGAAACCTAACCAAGACAGATAACAAGGATGTTGGAAGTAAGATT  848

seq1  CCTCCCTTCTAAGACTCGCCTTCCTGATCCCATTTCTCTTTGGTGGTAGG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTCTAAGACTCGCCTTCCTGATCCCATTTCTCTTTGGTGGTAGG  898

seq1  AGTTGGGGTAGAGAACAAAGGATGAGAACAAAGGGCAAGTATGAGTTGGA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGGTAGAGAACAAAGGATGAGAACAAAGGGCAAGTATGAGTTGGA  948

seq1  GGTTGGAGGACAAAAGAATAGGACAAAGATAGATAGTGGAAGACCAAGCA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGAGGACAAAAGAATAGGACAAAGATAGATAGTGGAAGACCAAGCA  998

seq1  AAGATGGCTTTGGCTCCTTTCTGTTCTTTACCATAAGAATAATTTTAAAC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCTTTGGCTCCTTTCTGTTCTTTACCATAAGAATAATTTTAAAC  1048

seq1  ACAGTGTTACAGAACTTCTTACTATACCAGAATAAAAACTTTCAAAGACA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTACAGAACTTCTTACTATACCAGAATAAAAACTTTCAAAGACA  1098

seq1  GTTTCTAGGCCAACTCCTCCTTCTCTTTATAATCCTAGAATTC  1132
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGGCCAACTCCTCCTTCTCTTTATAATCCTAGAATTC  1141