BAC Information

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BAC

Clone NameB6Ng01-315L04
Chromosome2 (Build37)
Map Location 133,865,339 - 134,003,490
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043785, A430048G15Rik, Bmp2
Downstream geneHao1, Txndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315L04.bB6Ng01-315L04.g
ACCGA106275GA106276
length1,1491,110
definitionB6Ng01-315L04.b B6Ng01-315L04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,865,339 - 133,866,504)(134,002,382 - 134,003,490)
sequence
gaattcaggtgtggagttgaggcaaatgcagtgaaaacttaatcagcacg
tgagtttatgacgcagcatgggatttcttagctgcaaaggatggctgaaa
aagggttgcttactatcttctacaccagcatgtttctcctccctggttaa
aataaattggtgaatgtatttggatcgttctttagatagaatttcttagt
atttttaaatcaataataagagtaataataacaatatcaatataatacct
aattataatgtactcaatacttcccaattagtatttcaataacttgacaa
gttagcaatttaatcctttgaacaagtctattagctagcagttaaagaga
agtaatttgcacaagttcatacagatgataggtagaattgccaccaaagt
ccctgccaaacaattttattatacaaatgattttactatgcattcttagc
tttttatccttttaaaaataagattaccaggatcctctccttcttttgtt
gttttatgttatagtcatctgaaaggaaaaccatctgacagagaccgttc
ttaaaggagatgccctgtttgtgcatgagtgtggtcaagagagcccctca
gcatttcaggccacaggagatgtagtgaaaatagagcaaacatcgtccct
gacagccttaaagaaacccaagctttcctagggcaatagagaacttataa
ctccttagggaaaatacagtgatttacaggaaagccacaaaatctctctg
tgagcaaccacagggttacagcatgacttcagaagccattgaatccacaa
caaataagggaagcagtgagctgtctccggctttggaacatctgttagaa
ctacacctgccgcaaagatttcctggttcctattctcaagagaaagtcag
ccagcagaaacagggctagaacacaatgactttactgagatggtccctca
gccttgccttaattcctgaaaacactgttcccctctgtgtatacatactt
acagcagtgggagcaggagtggatgtgcttgagatttacagaattacagg
atatcacatgggctaccagtccacctgggtgacattcattgcactggcct
aggtcctactcagtggtaacacatgacaaaatgtcatactactgaccac

gaattcattagcagtgagaactctgggaaatcgttccactctcttaacta
agataggaaatgctgtttcaatcaagattttcagaaaggcgattgcacac
ttccccatagtaattgaccctgaaattgagcaagctgaaactcaggcagt
ttctcagggcagtttgctgtgttttgctttggttttgatcttagggtaat
tgaaccacgattgttctctagtcttgcttagcatattttttttagctttg
ttttatttcatttattcttacgtatcacattacttggtttccctcagttt
ttcttcttcaagatgcctagacccaactctgcgaatcattcctcatggat
taagtccttagacttgattgtgtttgtgacgtgtttgtgacgactgattg
taacttctctgacatttctattttgtcacttcaaggacaaggcaccaagc
atgattaaggtattaatttccagcacaagttcactgaagttaccatagtt
gagcattcccagggataggaggcatcaaacgcacagaagtgcactgtttg
ctttggctcttaattctatataactagattgcaaccagtgttctaagact
ttattaaaattactgctgttcaagttttcttgtccttgtatctatttccc
agtgagtttggacctgccatttgtctgaccttgagaaaggaaatgaaata
tttctggcaaagagcagaaaggggatctcatgggaaagtgaatcctcaca
cgtgtgtcagctggattttggttggtgataaaactcagatcatttggata
aactctggatgaacagataaggttttgcaagagcacttgaactaattctg
aacccccaagcatgcatggttcatctatcgttgggtatccatgaggcaaa
tgcatccatctatcataatttcatagaatatcttgttgcatcaaattcaa
accattgtagttttgactgtagacttcaaagtcataaccaggcttgcact
atggcagagcaagctgcactctgggaaactgtttgggatgaatgtatcct
atttcaaagccatctttcactgttattattgccatctctcagagagttca
ctattttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_133865339_133866504
seq2: B6Ng01-315L04.b_47_1195

seq1  GAATTCAGGTGTGGAGTTGAGGCAAATGCAGTGAAAACTTAATCAGCACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGTGGAGTTGAGGCAAATGCAGTGAAAACTTAATCAGCACG  50

seq1  TGAGTTTATGACGCAGCATGGGATTTCTTAGCTGCAAAGGATGGCTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTATGACGCAGCATGGGATTTCTTAGCTGCAAAGGATGGCTGAAA  100

seq1  AAGGGTTGCTTACTATCTTCTACACCAGCATGTTTCTCCTCCCTGGTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTGCTTACTATCTTCTACACCAGCATGTTTCTCCTCCCTGGTTAA  150

seq1  AATAAATTGGTGAATGTATTTGGATCGTTCTTTAGATAGAATTTCTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTGGTGAATGTATTTGGATCGTTCTTTAGATAGAATTTCTTAGT  200

seq1  ATTTTTAAATCAATAATAAGAGTAATAATAACAATATCAATATAATACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAATCAATAATAAGAGTAATAATAACAATATCAATATAATACCT  250

seq1  AATTATAATGTACTCAATACTTCCCAATTAGTATTTCAATAACTTGACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAATGTACTCAATACTTCCCAATTAGTATTTCAATAACTTGACAA  300

seq1  GTTAGCAATTTAATCCTTTGAACAAGTCTATTAGCTAGCAGTTAAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCAATTTAATCCTTTGAACAAGTCTATTAGCTAGCAGTTAAAGAGA  350

seq1  AGTAATTTGCACAAGTTCATACAGATGATAGGTAGAATTGCCACCAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTGCACAAGTTCATACAGATGATAGGTAGAATTGCCACCAAAGT  400

seq1  CCCTGCCAAACAATTTTATTATACAAATGATTTTACTATGCATTCTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCAAACAATTTTATTATACAAATGATTTTACTATGCATTCTTAGC  450

seq1  TTTTTATCCTTTTAAAAATAAGATTACCAGGATCCTCTCCTTCTTTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCCTTTTAAAAATAAGATTACCAGGATCCTCTCCTTCTTTTGTT  500

seq1  GTTTTATGTTATAGTCATCTGAAAGGAAAACCATCTGACAGAGACCGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGTTATAGTCATCTGAAAGGAAAACCATCTGACAGAGACCGTTC  550

seq1  TTAAAGGAGATGCCCTGTTTGTGCATGAGTGTGGTCAAGAGAGCCCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAGATGCCCTGTTTGTGCATGAGTGTGGTCAAGAGAGCCCCTCA  600

seq1  GCATTTCAGGCCACAGGAGATGTAGTGAAAATAGAGCAAACATCGTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCAGGCCACAGGAGATGTAGTGAAAATAGAGCAAACATCGTCCCT  650

seq1  GACAGCCTTAAAGAAACCCAAGCTTTCCTAGGGCAATAGAGAACTTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCTTAAAGAAACCCAAGCTTTCCTAGGGCAATAGAGAACTTATAA  700

seq1  CTCCTTAGGGAAAATACAGTGATTTACAGGAAAGCCACAAAATCTCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGGGAAAATACAGTGATTTACAGGAAAGCCACAAAATCTCTCTG  750

seq1  TGAGCAACCACAGGGTTACAGCATGACTTCAGAAGCCATTGAATCCACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAACCACAGGGTTACAGCATGACTTCAGAAGCCATTGAATCCACAA  800

seq1  CAAATAAGGGAAGCAGTGAGCTGTCTCCGGCTTTGGAACATCTGTTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGGGAAGCAGTGAGCTGTCTCCGGCTTTGGAACATCTGTTAGAA  850

seq1  CTACACCTGCCGCAAAGATTTCCTGGTTCCTATTCTCAAGAGAAAGTCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACCTGCCGCAAAGATTTCCTGGTTCCTATTCTCAAGAGAAAGTCAG  900

seq1  CCAGCAGGAAACAGGGCTAGAACACAATGACTTTACTGAGATGGTCCCTC  950
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCA-GAAACAGGGCTAGAACACAATGACTTTACTGAGATGGTCCCTC  949

seq1  AGCCTTGCCTTAATTCCTGAAAACACTGTTTCCCCTCTGTGTATACAATA  1000
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  AGCCTTGCCTTAATTCCTGAAAACACTG-TTCCCCTCTGTGTATAC-ATA  997

seq1  CTTTACAAGGCAGTGGGAAGCAGGGAGTGGATTGTGCTTGAGATTTTACA  1050
      | |||||  |||||||| |||| |||||||| ||||||||||| ||||||
seq2  C-TTACA--GCAGTGGG-AGCA-GGAGTGGA-TGTGCTTGAGA-TTTACA  1040

seq1  GAA-TACAGGAATATCACAT-GGCTACCAGT-CAACTGGGTGACA-TCAA  1096
      ||| |||||| ||||||||| |||||||||| || |||||||||| ||| 
seq2  GAATTACAGG-ATATCACATGGGCTACCAGTCCACCTGGGTGACATTCAT  1089

seq1  TGCACCTGGCTAGTTCTAACTCAGTGGGTTAACACATGGAAACCAAATAT  1146
      |||||  | |||| ||  |||||||||  |||||||||   ||  || ||
seq2  TGCACTGGCCTAGGTCCTACTCAGTGG--TAACACATG---AC--AAAAT  1132

seq1  GTCATACTTACTGGAACCAC  1166
      ||||||| |||||  |||||
seq2  GTCATAC-TACTG--ACCAC  1149


seq1: chr2_134002382_134003490
seq2: B6Ng01-315L04.g_67_1176 (reverse)

seq1  AGGAAAATAGTGAACTCT----GAGATGGGCAAT-ATAACAGTTGAAAAG  45
      ||||||||||||||||||    ||||| |||||| ||||||||   ||||
seq2  AGGAAAATAGTGAACTCTCTGAGAGAT-GGCAATAATAACAGT--GAAAG  47

seq1  ATGGCTTTGAAATAGGATACAATTCAT-CCAAACAGTTTTCCAGAGTGCA  94
      |||||||||||||||||||| |||||| ||||||||||| ||||||||||
seq2  ATGGCTTTGAAATAGGATAC-ATTCATCCCAAACAGTTTCCCAGAGTGCA  96

seq1  GCTTGCTCTTGCCATAGTGCAAGCCTGGTTATGACTTTGAAGTCTACAGT  144
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTC-TGCCATAGTGCAAGCCTGGTTATGACTTTGAAGTCTACAGT  145

seq1  CAAAACTACAATGGTTTGAATTTGATGCAACAAGATATTCTATGAAATTA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTACAATGGTTTGAATTTGATGCAACAAGATATTCTATGAAATTA  195

seq1  TGATAGATGGATGCATTTGCCTCATGGATACCCAACGATAGATGAACCAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATGGATGCATTTGCCTCATGGATACCCAACGATAGATGAACCAT  245

seq1  GCATGCTTGGGGGTTCAGAATTAGTTCAAGTGCTCTTGCAAAACCTTATC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTGGGGGTTCAGAATTAGTTCAAGTGCTCTTGCAAAACCTTATC  295

seq1  TGTTCATCCAGAGTTTATCCAAATGATCTGAGTTTTATCACCAACCAAAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATCCAGAGTTTATCCAAATGATCTGAGTTTTATCACCAACCAAAA  345

seq1  TCCAGCTGACACACGTGTGAGGATTCACTTTCCCATGAGATCCCCTTTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGACACACGTGTGAGGATTCACTTTCCCATGAGATCCCCTTTCT  395

seq1  GCTCTTTGCCAGAAATATTTCATTTCCTTTCTCAAGGTCAGACAAATGGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGCCAGAAATATTTCATTTCCTTTCTCAAGGTCAGACAAATGGC  445

seq1  AGGTCCAAACTCACTGGGAAATAGATACAAGGACAAGAAAACTTGAACAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAAACTCACTGGGAAATAGATACAAGGACAAGAAAACTTGAACAG  495

seq1  CAGTAATTTTAATAAAGTCTTAGAACACTGGTTGCAATCTAGTTATATAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTTTAATAAAGTCTTAGAACACTGGTTGCAATCTAGTTATATAG  545

seq1  AATTAAGAGCCAAAGCAAACAGTGCACTTCTGTGCGTTTGATGCCTCCTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAGCCAAAGCAAACAGTGCACTTCTGTGCGTTTGATGCCTCCTA  595

seq1  TCCCTGGGAATGCTCAACTATGGTAACTTCAGTGAACTTGTGCTGGAAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGAATGCTCAACTATGGTAACTTCAGTGAACTTGTGCTGGAAAT  645

seq1  TAATACCTTAATCATGCTTGGTGCCTTGTCCTTGAAGTGACAAAATAGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACCTTAATCATGCTTGGTGCCTTGTCCTTGAAGTGACAAAATAGAA  695

seq1  ATGTCAGAGAAGTTACAATCAGTCGTCACAAACACGTCACAAACACAATC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGAGAAGTTACAATCAGTCGTCACAAACACGTCACAAACACAATC  745

seq1  AAGTCTAAGGACTTAATCCATGAGGAATGATTCGCAGAGTTGGGTCTAGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAAGGACTTAATCCATGAGGAATGATTCGCAGAGTTGGGTCTAGG  795

seq1  CATCTTGAAGAAGAAAAACTGAGGGAAACCAAGTAATGTGATACGTAAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGAAGAAGAAAAACTGAGGGAAACCAAGTAATGTGATACGTAAGA  845

seq1  ATAAATGAAATAAAACAAAGCTAAAAAAAATATGCTAAGCAAGACTAGAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGAAATAAAACAAAGCTAAAAAAAATATGCTAAGCAAGACTAGAG  895

seq1  AACAATCGTGGTTCAATTACCCTAAGATCAAAACCAAAGCAAAACACAGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCGTGGTTCAATTACCCTAAGATCAAAACCAAAGCAAAACACAGC  945

seq1  AAACTGCCCTGAGAAACTGCCTGAGTTTCAGCTTGCTCAATTTCAGGGTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCCCTGAGAAACTGCCTGAGTTTCAGCTTGCTCAATTTCAGGGTC  995

seq1  AATTACTATGGGGAAGTGTGCAATCGCCTTTCTGAAAATCTTGATTGAAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTATGGGGAAGTGTGCAATCGCCTTTCTGAAAATCTTGATTGAAA  1045

seq1  CAGCATTTCCTATCTTAGTTAAGAGAGTGGAACGATTTCCCAGAGTTCTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTCCTATCTTAGTTAAGAGAGTGGAACGATTTCCCAGAGTTCTC  1095

seq1  ACTGCTAATGAATTC  1109
      |||||||||||||||
seq2  ACTGCTAATGAATTC  1110


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