BAC Information

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BAC

Clone NameB6Ng01-315O19
Chromosome2 (Build37)
Map Location 150,627,295 - 150,748,731
singlet/doubletdoublet
Overlap genePygb, Abhd12, Gins1
Upstream geneC530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605
Downstream geneLOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315O19.bB6Ng01-315O19.g
ACCGA106447GA106448
length1,131314
definitionB6Ng01-315O19.b B6Ng01-315O19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,627,295 - 150,628,432)(150,748,434 - 150,748,731)
sequence
gaattctacatgggccgcacgctgcagaataccatggtgaacctgggcct
tcagactgcatgcgacgaagccacttatcaggtgtgtttaatctgtcccc
tgaagagtgaccactgacattaggacacctgtgccctggagtgttttacc
ctgtcaggaaggatcatgtcccttcctcaaggggagaacataagactgta
agggatgataataaatggaattatgagaagactggtttgagtggtgatgc
tgtggtttagaagtttctagaaatgtactcccttctcccagtccaggggt
aggttttgaatatgtcatgatctatttgatttccctctctgatcttcaga
catcctcctgacctcattgtgctgtgcaggtgtagaagtgcctcctctca
tggaagaagccaactgttcaggcattttctttgccttaattttacacagg
tcgtttgtaccctcagcagagctgtgcttatctcccagtctctcttcact
ctcctctctcctctggaacgctggtctcagatggggaagttctgtagtga
gaccttgcaacatgggtacatgaaggtctttagagaggggtgccccccat
gttgccgcagcaccccatctgctttgttcagagcttaggtatgaggagtt
tgggggcctggtagggacataagtccagcatgggagtaagtctcgttgga
gaccaccttctctcctgaggatgttagtcaccattctattgctatgaaaa
aataatgtagagaaatcgaaagaaagaaagatccatttcggttccagtct
cagtggcctgagacaggcagccctgcatgtaatgaagccgcttaccaggt
gagcatgtggcagagtcggctgcccacttcccagagccagcaatcaagga
cagagacgcagggcaggacgcactcctggaggtgccttccccgcaggacc
catttcctctactagacctctcctgatagtcttacgcagcctgtgttctc
atcagtggctcagcaagttctgaggaacacagcttttgcgatccatcacc
tccttctcaagtcaacgctgtacctctcacaactagaactcaggaaacgg
aattctctcgagtcagccttatcaccagcgc
gaattcctgtcttgaaaaacaaaaacaaaaatataaataaataaactctt
acaggcatctagagtctacacagtgagttccaagacagccagggctacac
aaagaatccctgtctcaaaaaaccaaaacctaaaacaatcaaagaaattg
ctgaatttttttttagttaaaatataaccacattattttcctctttcatt
tcctccctccaatccctcctatgtaacatccttcctccctcaaagtcata
tgtgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatatataca
cacacacacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150627295_150628432
seq2: B6Ng01-315O19.b_48_1178

seq1  GAATTCTACATGGGCCGCACGCTGCAGAATACCATGGTGAACCTGGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATGGGCCGCACGCTGCAGAATACCATGGTGAACCTGGGCCT  50

seq1  TCAGACTGCATGCGACGAAGCCACTTATCAGGTGTGTTTAATCTGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGCATGCGACGAAGCCACTTATCAGGTGTGTTTAATCTGTCCCC  100

seq1  TGAAGAGTGACCACTGACATTAGGACACCTGTGCCCTGGAGTGTTTTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTGACCACTGACATTAGGACACCTGTGCCCTGGAGTGTTTTACC  150

seq1  CTGTCAGGAAGGATCATGTCCCTTCCTCAAGGGGAGAACATAAGACTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGAAGGATCATGTCCCTTCCTCAAGGGGAGAACATAAGACTGTA  200

seq1  AGGGATGATAATAAATGGAATTATGAGAAGACTGGTTTGAGTGGTGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGATAATAAATGGAATTATGAGAAGACTGGTTTGAGTGGTGATGC  250

seq1  TGTGGTTTAGAAGTTTCTAGAAATGTACTCCCTTCTCCCAGTCCAGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTAGAAGTTTCTAGAAATGTACTCCCTTCTCCCAGTCCAGGGGT  300

seq1  AGGTTTTGAATATGTCATGATCTATTTGATTTCCCTCTCTGATCTTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGAATATGTCATGATCTATTTGATTTCCCTCTCTGATCTTCAGA  350

seq1  CATCCTCCTGACCTCATTGTGCTGTGCAGGTGTAGAAGTGCCTCCTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCCTGACCTCATTGTGCTGTGCAGGTGTAGAAGTGCCTCCTCTCA  400

seq1  TGGAAGAAGCCAACTGTTCAGGCATTTTCTTTGCCTTAATTTTACACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAGCCAACTGTTCAGGCATTTTCTTTGCCTTAATTTTACACAGG  450

seq1  TCGTTTGTACCCTCAGCAGAGCTGTGCTTATCTCCCAGTCTCTCTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTGTACCCTCAGCAGAGCTGTGCTTATCTCCCAGTCTCTCTTCACT  500

seq1  CTCCTCTCTCCTCTGGAACGCTGGTCTCAGATGGGGAAGTTCTGTAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTCTCCTCTGGAACGCTGGTCTCAGATGGGGAAGTTCTGTAGTGA  550

seq1  GACCTTGCAACATGGGTACATGAAGGTCTTTAGAGAGGGGTGCCCCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGCAACATGGGTACATGAAGGTCTTTAGAGAGGGGTGCCCCCCAT  600

seq1  GTTGCCGCAGCACCCCATCTGCTTTGTTCAGAGCTTAGGTATGAGGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCGCAGCACCCCATCTGCTTTGTTCAGAGCTTAGGTATGAGGAGTT  650

seq1  TGGGGGCCTGGTAGGGACATAAGTCCAGCATGGGAGTAAGTCTCGTTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCCTGGTAGGGACATAAGTCCAGCATGGGAGTAAGTCTCGTTGGA  700

seq1  GACCACCTTCTCTCCTGAGGATGTTAGTCACCATTCTATTGCTATGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCTTCTCTCCTGAGGATGTTAGTCACCATTCTATTGCTATGAAAA  750

seq1  AATAATGTAGAGAAATCGAAAGAAAGAAAGATCCATTTCGGTTCCAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTAGAGAAATCGAAAGAAAGAAAGATCCATTTCGGTTCCAGTCT  800

seq1  CAGTGGCCTGAGACAGGCAGCCCTGCATGTAATGAAGCCGCTTACCAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCCTGAGACAGGCAGCCCTGCATGTAATGAAGCCGCTTACCAGGT  850

seq1  GAGCATGTGGCAGAGTCGGCTGCCCACTTCCCAGAGCCAGCAATCAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGTGGCAGAGTCGGCTGCCCACTTCCCAGAGCCAGCAATCAAGGA  900

seq1  CAGAGACGCAGGGGCAGGACGCACTCCTGGAGGGTGCCTTCCCCGCAGGG  950
      |||||||||| |||||||||||||||||||| ||||||||||||||| ||
seq2  CAGAGACGCA-GGGCAGGACGCACTCCTGGA-GGTGCCTTCCCCGCA-GG  947

seq1  ACCCATTTCCTCTAACTAGACCTCTCCTGATAGTCTTTACGCAGCCTGTG  1000
      ||||||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  ACCCATTTCCTCT-ACTAGACCTCTCCTGATAGTC-TTACGCAGCCTGTG  995

seq1  TCTTCATCAGTGGCTCAGCCAGTTCCTGAGG-ACACAGCTTTTGCGATCC  1049
      |  |||||||||||||||| |||| |||||| ||||||||||||||||||
seq2  TTCTCATCAGTGGCTCAGCAAGTT-CTGAGGAACACAGCTTTTGCGATCC  1044

seq1  ATTCACCTCC-TCTCAAGGTCAACGCTGTA-CTCTCACAACTAGGACTTC  1097
      | |||||||| |||||| |||||||||||| ||||||||||||| |||  
seq2  A-TCACCTCCTTCTCAA-GTCAACGCTGTACCTCTCACAACTAGAACT--  1090

seq1  AGAGGAAACCGATTTCTTCTGAGTCAG-CTTATCAACAGCGC  1138
        ||||||| || ||||   ||||||| ||||||| ||||||
seq2  -CAGGAAACGGAATTCTCTCGAGTCAGCCTTATCACCAGCGC  1131

seq1: chr2_150748434_150748731
seq2: B6Ng01-315O19.g_65_362 (reverse)

seq1  TATATATATATATATATATATACACACACACACACACACACACACACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATACACACACACACACACACACACACACATA  50

seq1  TGACTTTGAGGGAGGAAGGATGTTACATAGGAGGGATTGGAGGGAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGAGGGAGGAAGGATGTTACATAGGAGGGATTGGAGGGAGGAAA  100

seq1  TGAAAGAGGAAAATAATGTGGTTATATTTTAACTAAAAAAAAATTCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGGAAAATAATGTGGTTATATTTTAACTAAAAAAAAATTCAGCA  150

seq1  ATTTCTTTGATTGTTTTAGGTTTTGGTTTTTTGAGACAGGGATTCTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTGATTGTTTTAGGTTTTGGTTTTTTGAGACAGGGATTCTTTGT  200

seq1  GTAGCCCTGGCTGTCTTGGAACTCACTGTGTAGACTCTAGATGCCTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCTGGCTGTCTTGGAACTCACTGTGTAGACTCTAGATGCCTGTAA  250

seq1  GAGTTTATTTATTTATATTTTTGTTTTTGTTTTTCAAGACAGGAATTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATTTATTTATATTTTTGTTTTTGTTTTTCAAGACAGGAATTC  298