BAC Information

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BAC

Clone NameB6Ng01-316O09
Chromosome2 (Build37)
Map Location 6,901,895 - 6,903,009
singlet/doubletsinglet
Overlap genenone
Upstream geneUpf2, LOC100040343, 5430407P10Rik, LOC634939, Echdc3, 1700014B07Rik, Usp6nl, LOC100040387, Cugbp2, LOC100040659
Downstream geneLOC100040648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316O09.bB6Ng01-316O09.g
ACCGA107179GA107180
length1,116562
definitionB6Ng01-316O09.b B6Ng01-316O09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aagactgtgagagactgaaactctagtatcgtaagccatgggctcctgct
ctctctctctctctctctctctctttctctctctctctccctccctgtct
cccttcctccctctctctttctttctttctttctttctttctttctttct
ttctttctttctttctttctttctttcttcctttctttctctccctcttt
cttttcctttcctttcttttctttctttcttttttctttgattcacgttt
tattgcattatgagaaaagatacataatttcaattcatctgaatttgtta
acatttaaagacatattttgagtaaatagacatacatcacattcttcttt
tccgttttataccccaactcctcccgaagaccccccttcagaacatgcac
tacctttcatttcttatcatattctttaaaatttataaaatattgtaaca
ataaaaatgagtattataaaagttgtttgatataaaacagcaatcaactg
aacagtcatatgtagatgtttgtctacaggaatactgaaaatacatactt
tttctcaatataaaatttaaataattctaaatatattaactgtatgatat
tttaaaataaaatatcactattagttttttaatgaacataaatagatagt
ctttttgttagtttgttttgtttttagtagagtttaaaatcttgcttggc
tcttactgtggtacaaaaacaaaataagaatagtttttggacattagagt
tcattgtaataaggctgtacttaaatgtccctcacatcaccaaaggattt
taccaccatagtagataagctaagagttgacagttctgctgtgccaaaaa
atgaattgtacgcaccatttttggatacagatttcctgctatggtcaaag
ctatttgacttgagtgattgtcatcattctcagcccgcagggaacagata
cattcatttaagaaatggtgtttgtattagatggtctatccatgaagtca
ttcatcaactgtttcaatgacatggtctgctttggaggggtgttcacaga
acataggtggagggtagaattccgtccaattgggctttgatgtatttgaa
atgcattcactctcag

caaaatctagtatattaagaaaacaaaagatccaatttaaaagtggagtg
cagatctaaacaagagtatttaaaatagaggaattgcaaatagccaagaa
gcacttgaagaaatattcagtattctcagtcaccagggaaatgaaaatca
aaaactacattgagatttcaactacacatatgataaatggctacaatcaa
ttttaaaaagtgatagcgcacgctgttgaggctgtggagcatggtgaaca
cttacccattggtggtggggctgcaaacttggacatcagcgtggcagttc
ctcaggaagatgggaattaatctacctcaagatccagctctaccactctt
ggacagacacccaaatgtcattttgtcttaccatacttgctcaaccatgt
tcattgatgctctatttataataggcagaaatcaaaaacaacttagttgc
ctctcaacaggacaatggataaagaaaatgtggtacatttacacaataaa
gtactactcagccattaaaaaaaagatgggggagatggattggaaggatc
aggtagggatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_6901895_6903009
seq2: B6Ng01-316O09.b_62_1177 (reverse)

seq1  CTGAGA-TGAATGCATTTCAAAATCATCACAG-CCAATGAACCAGAATCT  48
      |||||| |||||||||||||||  ||||| || |||||    | ||||  
seq2  CTGAGAGTGAATGCATTTCAAATACATCAAAGCCCAATTGGACGGAATTC  50

seq1  TACCCT-CACCTAATGTCTGTG-ACA-CCCTCC-AAGCAGAACCATTGTT  94
      |||||| ||||||   |||||| ||| |||||| |||||| |||||   |
seq2  TACCCTCCACCTATGTTCTGTGAACACCCCTCCAAAGCAG-ACCAT--GT  97

seq1  CATTGAAACAGTTGATGAATGACTTCATGGATAGACCATCTTAATACAAA  144
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATTGAAACAGTTGATGAATGACTTCATGGATAGACCATC-TAATACAAA  146

seq1  CACCATTTCTTAAATGAATGTAATCTGTTCCCTGCGGGCTGAGAATGATG  194
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACCATTTCTTAAATGAATGT-ATCTGTTCCCTGCGGGCTGAGAATGATG  195

seq1  ACAATCACTCAAGTCAAATAGCTTTGACCATAGCAGGAAATCTGTATCCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCACTCAAGTCAAATAGCTTTGACCATAGCAGGAAATCTGTATCCA  245

seq1  AAAATGGTGCGTACAATTCATTTTTTGGCACAGCAGAACTGTCAACTCTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTGCGTACAATTCATTTTTTGGCACAGCAGAACTGTCAACTCTT  295

seq1  AGCTTATCTACTATGGTGGTAAAATCCTTTGGTGATGTGAGGGACATTTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATCTACTATGGTGGTAAAATCCTTTGGTGATGTGAGGGACATTTA  345

seq1  AGTACAGCCTTATTACAATGAACTCTAATGTCCAAAAACTATTCTTATTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGCCTTATTACAATGAACTCTAATGTCCAAAAACTATTCTTATTT  395

seq1  TGTTTTTGTACCACAGTAAGAGCCAAGCAAGATTTTAAACTCTACTAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGTACCACAGTAAGAGCCAAGCAAGATTTTAAACTCTACTAAAA  445

seq1  ACAAAACAAACTAACAAAAAGACTATCTATTTATGTTCATTAAAAAACTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAACTAACAAAAAGACTATCTATTTATGTTCATTAAAAAACTA  495

seq1  ATAGTGATATTTTATTTTAAAATATCATACAGTTAATATATTTAGAATTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATATTTTATTTTAAAATATCATACAGTTAATATATTTAGAATTA  545

seq1  TTTAAATTTTATATTGAGAAAAAGTATGTATTTTCAGTATTCCTGTAGAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTATATTGAGAAAAAGTATGTATTTTCAGTATTCCTGTAGAC  595

seq1  AAACATCTACATATGACTGTTCAGTTGATTGCTGTTTTATATCAAACAAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTACATATGACTGTTCAGTTGATTGCTGTTTTATATCAAACAAC  645

seq1  TTTTATAATACTCATTTTTATTGTTACAATATTTTATAAATTTTAAAGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATACTCATTTTTATTGTTACAATATTTTATAAATTTTAAAGAA  695

seq1  TATGATAAGAAATGAAAGGTAGTGCATGTTCTGAAGGGGGGTCTTCGGGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAGAAATGAAAGGTAGTGCATGTTCTGAAGGGGGGTCTTCGGGA  745

seq1  GGAGTTGGGGTATAAAACGGAAAAGAAGAATGTGATGTATGTCTATTTAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGGGGTATAAAACGGAAAAGAAGAATGTGATGTATGTCTATTTAC  795

seq1  TCAAAATATGTCTTTAAATGTTAACAAATTCAGATGAATTGAAATTATGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATATGTCTTTAAATGTTAACAAATTCAGATGAATTGAAATTATGT  845

seq1  ATCTTTTCTCATAATGCAATAAAACGTGAATCAAAGAAAAAAGAAAGAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCTCATAATGCAATAAAACGTGAATCAAAGAAAAAAGAAAGAAA  895

seq1  GAAAAGAAAGGAAAGGAAAAGAAAGAGGGAGAGAAAGAAAGGAAGAAAGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAGGAAAGGAAAAGAAAGAGGGAGAGAAAGAAAGGAAGAAAGA  945

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  995

seq1  GAAAGAGAGAGGGAGGAAGGGAGACAGGGAGGGAGAGAGAGAGAGAAAGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAGGGAGGAAGGGAGACAGGGAGGGAGAGAGAGAGAGAAAGA  1045

seq1  GAGAGAGAGAGAGAGAGAGAGAGCAGGAGCCCATGGCTTACGATACTAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGCAGGAGCCCATGGCTTACGATACTAGA  1095

seq1  GTTTCAGTCTCTCACAGTCTT  1115
      |||||||||||||||||||||
seq2  GTTTCAGTCTCTCACAGTCTT  1116


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