BAC Information

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BAC

Clone NameB6Ng01-317A08
Chromosome2 (Build37)
Map Location 43,231,506 - 43,232,608
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC100041228
Downstream geneLOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317A08.bB6Ng01-317A08.g
ACCGA107268GA107269
length1,1861,100
definitionB6Ng01-317A08.b B6Ng01-317A08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatagattgtatactaagtattctgtatttttcagctaatattc
acatattattgaatacataccatgcatatctttttggatgagttacttca
cacaaaatgatattttttagttccatccatttgcctgcaaaactaatgat
gttcttgttcttaatagctgggtagtattccattatgcaaatgaaccaca
atttctgtgtctattcttctattgtgggacatctgggttgtttccacctt
ctggctatcatggataaggccactatgaacatactgaaacacatgtccct
gtggcatggtgggacatcttttgggtatatgcccaagagttgtatagctg
ggtcttcaggtagaactatttccaattttctgaggaaccttggatttcca
gagtagttgtaccagattgcaatctcaccagcaatggagctcctttctcc
acatcctctccaacatgttctgtcatctgtgcttttgatcttagccattc
tgattggtataaagtagaatctcagggtcgttttgatttgcatttccctg
atcactaaggactttgaacatttctttaagtgcttctcagccattcaaga
ttcctgtgttgtaaattctctatttaggactataccccatttttgattgt
gttgtttggattgttggtggatggcttcttgaattctttatatactttgg
atattagcatctatcggatgtggggttagtgaagatttttttctcaatct
ctaggttgctaatttgtcttattgactatgtcctttgccttacagaagct
ttccagtttcatgaggtaccatttatcaattcttgatcttaaagcctgag
ctagtggatttctgtttaggaaatttttccctgtgccaatgagttcaaag
gctcttttgcaccttctcttctattcaattcagtgtacctgacttgtgtt
gaggttcttgagccacttggatttgagctttgtacagtgacaatatgtta
tctatttcattttctacatacagagctactgatcatccactaatgaggac
aagacagatgatcatctccccattctatcagtattgtactcagttctact
ggagaatagacacaatgtgatcaggtatcagtggcagagagttcaagtca
ctattgccaaatgcaattgatgattgtccgaagtca

gaattccatgaatttaaaagacactgccatcttattgaatcattgcgtat
aatctttatatttcattgaaagcataataaaaatcatatccatctggcat
agaaaagctaaaggctactgcagagatttatttatttaattttatacaag
aaacatttttttccagttacatagaataagtttatttgaataggatgttt
ttaccctatgcttcaagaggaaagggcccttaggttaaaatgcattctga
cgatcattgtgacaaaactcagaagcaatgtgcaggagataaagtcattg
gttcaaatagagcttataaatatgccagtgagaaggaatttttaacaatg
caaaatgatagttttacaaagctttgttatgtatatgtacatgaacaaat
attatatacatgcatgtgtatttatatgtttagaacatacaaatatgtac
cttttggtgtgttgatgaatagaggaatataaattaaaataaaggggaat
aaagataaaaagaaactgtgattttttaaaaaatattttattgtatgtgt
gtgtgtgagtgccagcatgtatgcatgtgtactacaccttgtgtactggc
catggggaccagaaatgagtgttgccttccctggaacttgagctacaagt
agttgtaagcttccatgtgtgtgctgtgagtcaaactctacaagagcagc
aagtgtccttaactattaagatatctctcttttgcccataaaataattac
tctttttccagtccatttgtatcatgaaataataaagatgatgaacacaa
tcctgtacatttgagattaagaaaaatattgataggaaagtaaaggcatt
taaacagtaaacttctcagcagttagtattagtatgcctgatgtatacca
caccatctcggcagggcagggacaactaaacttgggaaaacacagaggcc
atttgccatcccaacatgtatagtaacagacatcagtactgaaggtgcga
tcaagtggctcagagacgctggaaaacagactggtgtgttttcaacatct
catgtgacatggtatcccatcctccttgtcctgtggagtctcttatctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43231506_43232608
seq2: B6Ng01-317A08.g_69_1168 (reverse)

seq1  GTAGATAAGAGAACTCACAGGACAAGGGAGATGGGATACAATGTCAACAT  50
      ||||||||||||   ||||||||||||  |||||||||| ||||| ||||
seq2  GTAGATAAGAGACTCCACAGGACAAGGAGGATGGGATACCATGTC-ACAT  49

seq1  GAGATGTTTGAAAACACCACCAGTCTGTTTTCCAGCGTCTCTGAGCCACT  100
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGATG-TTGAAAACA-CACCAGTCTGTTTTCCAGCGTCTCTGAGCCACT  97

seq1  TGATCGCACCCTTCAGTACTGATGTCTGTTACTATACATGTTGGGATGGC  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGATCGCA-CCTTCAGTACTGATGTCTGTTACTATACATGTTGGGATGGC  146

seq1  AAATGGCCTCTGTGTTTTCCCAAGTTTAGTTGTCCCTGCCCTGCCGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCCTCTGTGTTTTCCCAAGTTTAGTTGTCCCTGCCCTGCCGAGAT  196

seq1  GGTGTGGTATACATCAGGCATACTAATACTAACTGCTGAGAAGTTTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTATACATCAGGCATACTAATACTAACTGCTGAGAAGTTTACTG  246

seq1  TTTAAATGCC-TTACTTTCCTATCAATATTTTTCTTAATCTCAAATGTAC  299
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGCCTTTACTTTCCTATCAATATTTTTCTTAATCTCAAATGTAC  296

seq1  AGGATTGTGTTCATCATCTTTATTATTTCATGATACAAATGGACTGGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTGTTCATCATCTTTATTATTTCATGATACAAATGGACTGGAAA  346

seq1  AAGAGTAATTATTTTATGGGCAAAAGAGAGATATCTTAATAGTTAAGGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAATTATTTTATGGGCAAAAGAGAGATATCTTAATAGTTAAGGAC  396

seq1  ACTTGCTGCTCTTGTAGAGTTTGACTCACAGCACACACATGGAAGCTTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTGCTCTTGTAGAGTTTGACTCACAGCACACACATGGAAGCTTAC  446

seq1  AACTACTTGTAGCTCAAGTTCCAGGGAAGGCAACACTCATTTCTGGTCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTTGTAGCTCAAGTTCCAGGGAAGGCAACACTCATTTCTGGTCCC  496

seq1  CATGGCCAGTACACAAGGTGTAGTACACATGCATACATGCTGGCACTCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCAGTACACAAGGTGTAGTACACATGCATACATGCTGGCACTCAC  546

seq1  ACACACACATACAATAAAATATTTTTTAAAAAATCACAGTTTCTTTTTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATACAATAAAATATTTTTTAAAAAATCACAGTTTCTTTTTAT  596

seq1  CTTTATTCCCCTTTATTTTAATTTATATTCCTCTATTCATCAACACACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCCCCTTTATTTTAATTTATATTCCTCTATTCATCAACACACCA  646

seq1  AAAGGTACATATTTGTATGTTCTAAACATATAAATACACATGCATGTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTACATATTTGTATGTTCTAAACATATAAATACACATGCATGTATA  696

seq1  TAATATTTGTTCATGTACATATACATAACAAAGCTTTGTAAAACTATCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTGTTCATGTACATATACATAACAAAGCTTTGTAAAACTATCAT  746

seq1  TTTGCATTGTTAAAAATTCCTTCTCACTGGCATATTTATAAGCTCTATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTGTTAAAAATTCCTTCTCACTGGCATATTTATAAGCTCTATTT  796

seq1  GAACCAATGACTTTATCTCCTGCACATTGCTTCTGAGTTTTGTCACAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAATGACTTTATCTCCTGCACATTGCTTCTGAGTTTTGTCACAATG  846

seq1  ATCGTCAGAATGCATTTTAACCTAAGGGCCCTTTCCTCTTGAAGCATAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTCAGAATGCATTTTAACCTAAGGGCCCTTTCCTCTTGAAGCATAGG  896

seq1  GTAAAAACATCCTATTCAAATAAACTTATTCTATGTAACTGGAAAAAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAACATCCTATTCAAATAAACTTATTCTATGTAACTGGAAAAAAAT  946

seq1  GTTTCTTGTATAAAATTAAATAAATAAATCTCTGCAGTAGCCTTTAGCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTGTATAAAATTAAATAAATAAATCTCTGCAGTAGCCTTTAGCTT  996

seq1  TTCTATGCCAGATGGATATGATTTTTATTATGCTTTCAATGAAATATAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGCCAGATGGATATGATTTTTATTATGCTTTCAATGAAATATAAA  1046

seq1  GATTATACGCAATGATTCAATAAGATGGCAGTGTCTTTTAAATTCATGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATACGCAATGATTCAATAAGATGGCAGTGTCTTTTAAATTCATGGA  1096

seq1  ATTC  1103
      ||||
seq2  ATTC  1100


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