BAC Information

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BAC

Clone NameB6Ng01-317C13
Chromosome2 (Build37)
Map Location 45,475,275 - 45,476,446
singlet/doubletsinglet
Overlap genenone
Upstream geneGtdc1, Zeb2
Downstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317C13.bB6Ng01-317C13.g
ACCGA107374GA107375
length1,2181,172
definitionB6Ng01-317C13.b B6Ng01-317C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttatacattcatgcctaggtcataagctaggcctgttcccat
ctagctcataacttagttatcccatttataccaagttctgccacatggct
gttttcctctcctcatttcctacctttgacttctttaggatcttggtggc
catctttcatcctgactccctctccgagttccttctcttccagagatctc
tgcctagtctctctttgactgttcagctctttattgacaggcgatacttt
tacacagtgcacaagagtccctacactttggtttttgcctcttttgcccg
cacccttgttggcaaatgtatctatttcattgctgatattgatgcattcc
tttgcttatattagaaccagcttctttggattttcaataaagatgaaaga
tcagctgctctcctggaatcttccaggccttcatcaccagattggaactg
ctgacatacagactgtcttgtcttgcgcgtgctcaactggccaagaagaa
caacgctgcaacaggatccttctgcacacgtttattcagtcctgtttctt
cttgtttatatctcccttgtttatatctctcttgtttatatctccccgaa
ccctgggcctctcactcttttatactctcagttccccatccacgcacagc
aggccacgccacctcaccaggcacgcagcttcaactaatcagggcagcag
gggcatatctccatcaagatggattcacaggtatcctggtacacctgcgc
agctctcaagatgtttgtggcttatgtgaggaagtcaggtgcaaatcata
cgacttagctgcagtccctggcgcctttgggactgccgccacacctgctc
ctcacagtcttgtaatcctatctaataaatactctcataatgcatattca
ttcactatgttttgttcctctagaatacagtgactaattcagatgctcac
tataaaaaagtgaagtctgttgttgcagtccaaggacctacataaaggct
aggcagtcatagcagccacctgttatcccagcacctcagtaaatagtgat
ctccaggccaactgactagttctcaacctgtgagtttgcaacccctttgc
gggtcaagacctttatacagggttcacattaaggtatactgcttcaattt
acgttaggattaaacgtagcatacgtagaggccgccaccaaataatttta
taagatatgtgcggttag

gaattctttgatagagatgttatgcctaatttttaaacactttccccttt
tgacttttgaacatttctaattcgaaggtcactgtttttattaattactg
aaactcacctggatcatcttgaaactctaaactacccatattttaattct
agctttgcttcaaactccctttgtcatgtcttcttgatagatattcatac
ttcattgtcaccagttacttttggctctaaaatttccttcactgtgtgtc
tccaagtggttaccacatttactccttttaccccttactaaatatatggt
catctgctcagcttccaagactcttcatactgatttataaatatttttta
aaatatataatctatggcaagcatgtttccgagtgttcaggacacactaa
gaataaaaaaaaaagtttttaaatgtgcatttataagaactgcattgcag
aaaggtaagataaataagtagtaactaatatgatgactacatacatacat
aaattatgcatactagaaggtatgctttcattatttagagaaataatact
ttgaaaggcaattcaatacatattaataaacatctactgaataattattt
gaatgagtgctttagactctagtttatcttggttcagtttaattgaagaa
aggagttatagttaaataagagctaagttaaggattggttttagatggta
gagacctttttctctgatttgttttctgtttgccttagtcattgtgtttg
gtggaatgagtggattgtttcagaggatattggcaatttaaataccaact
catttattaaaaatttcaatctgtttacttcttcccttcctgccttcttt
cctctctttattcctccctcctttctttcctccaaaacactctccttcct
ttactctctcgttcttttctctctcttatttaaacaagcaactatcatcc
ataaactatgggttacaggattattaataataaagcattgaacatgagat
ctcacaaacaagaaaaggcataataaataattgaaatgagtcttagcagt
gtagatcaggaatacagaaccttgtttgctatgttcattgagcatagaat
tttttttgaactgctaaaaatataactaagaaaccaagtcaatcatcgtg
tcagttcagttatcctcaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_45475275_45476446
seq2: B6Ng01-317C13.g_67_1238

seq1  GAATTCTTTGATAGAGATGTTATGCCTAATTTTTAAACACTTTCCCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATAGAGATGTTATGCCTAATTTTTAAACACTTTCCCCTTT  50

seq1  TGACTTTTGAACATTTCTAATTCGAAGGTCACTGTTTTTATTAATTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTGAACATTTCTAATTCGAAGGTCACTGTTTTTATTAATTACTG  100

seq1  AAACTCACCTGGATCATCTTGAAACTCTAAACTACCCATATTTTAATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACCTGGATCATCTTGAAACTCTAAACTACCCATATTTTAATTCT  150

seq1  AGCTTTGCTTCAAACTCCCTTTGTCATGTCTTCTTGATAGATATTCATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCTTCAAACTCCCTTTGTCATGTCTTCTTGATAGATATTCATAC  200

seq1  TTCATTGTCACCAGTTACTTTTGGCTCTAAAATTTCCTTCACTGTGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGTCACCAGTTACTTTTGGCTCTAAAATTTCCTTCACTGTGTGTC  250

seq1  TCCAAGTGGTTACCACATTTACTCCTTTTACCCCTTACTAAATATATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTGGTTACCACATTTACTCCTTTTACCCCTTACTAAATATATGGT  300

seq1  CATCTGCTCAGCTTCCAAGACTCTTCATACTGATTTATAAATATTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTCAGCTTCCAAGACTCTTCATACTGATTTATAAATATTTTTTA  350

seq1  AAATATATAATCTATGGCAAGCATGTTTCCGAGTGTTCAGGACACACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATAATCTATGGCAAGCATGTTTCCGAGTGTTCAGGACACACTAA  400

seq1  GAATAAAAAAAAAAGTTTTTAAATGTGCATTTATAAGAACTGCATTGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAAAAAAAGTTTTTAAATGTGCATTTATAAGAACTGCATTGCAG  450

seq1  AAAGGTAAGATAAATAAGTAGTAACTAATATGATGACTACATACATACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAAGATAAATAAGTAGTAACTAATATGATGACTACATACATACAT  500

seq1  AAATTATGCATACTAGAAGGTATGCTTTCATTATTTAGAGAAATAATACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATGCATACTAGAAGGTATGCTTTCATTATTTAGAGAAATAATACT  550

seq1  TTGAAAGGCAATTCAATACATATTAATAAACATCTACTGAATAATTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGCAATTCAATACATATTAATAAACATCTACTGAATAATTATTT  600

seq1  GAATGAGTGCTTTAGACTCTAGTTTATCTTGGTTCAGTTTAATTGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTGCTTTAGACTCTAGTTTATCTTGGTTCAGTTTAATTGAAGAA  650

seq1  AGGAGTTATAGTTAAATAAGAGCTAAGTTAAGGATTGGTTTTAGATGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTATAGTTAAATAAGAGCTAAGTTAAGGATTGGTTTTAGATGGTA  700

seq1  GAGACCTTTTTCTCTGATTTGTTTTCTGTTTGCCTTAGTCATTGTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTTTTTCTCTGATTTGTTTTCTGTTTGCCTTAGTCATTGTGTTTG  750

seq1  GTGGAATGAGTGGATTGTTTCAGAGGATATTGGCAATTTAAATACCAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATGAGTGGATTGTTTCAGAGGATATTGGCAATTTAAATACCAACT  800

seq1  CATTTATTAAAAATTTCAATCTGTTTACTTCTTCCCTTCCTGCCTTCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTAAAAATTTCAATCTGTTTACTTCTTCCCTTCCTGCCTTCTTT  850

seq1  CCTCTCTTTATTCCTCCCTCCTTTCTTTCCTCCAAAACACTCTCCTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTATTCCTCCCTCCTTTCTTTCCTCCAAAACACTCTCCTTCCT  900

seq1  TTACTCTCTCGTTCTTTTCTCTCTCTTATTTAAACAAGCAACTATCATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTCTCGTTCTTTTCTCTCTCTTATTTAAACAAGCAACTATCATCC  950

seq1  ATAAACTATGGGTTTACAAGGATTATTAATAATAAAGCATTGAACATGAG  1000
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  ATAAACTATGGG-TTAC-AGGATTATTAATAATAAAGCATTGAACATGAG  998

seq1  ATCTCACAAACAAGAAAAAGGCAT-ATAAATAAATGAAATGAGTC-TAGC  1048
      |||||||||||||| ||||||||| |||||||| ||||||||||| ||||
seq2  ATCTCACAAACAAG-AAAAGGCATAATAAATAATTGAAATGAGTCTTAGC  1047

seq1  AGTGTAGATCAGGGATACAGAA-CTTGTTTGCTTAGTGTTCATGAAGCAT  1097
      ||||||||||||| |||||||| ||||||||||   |||||||  |||| 
seq2  AGTGTAGATCAGGAATACAGAACCTTGTTTGCT--ATGTTCATTGAGCA-  1094

seq1  TAGATTTGTTTTTGAAACCTGCT-AAAATATAACT-AGAA--CCAGTCAA  1143
      |||| || ||||||||  ||||| ||||||||||| ||||  | ||||||
seq2  TAGAATTTTTTTTGAA--CTGCTAAAAATATAACTAAGAAACCAAGTCAA  1142

seq1  TCATCGTTGTTCAG-TCAGTTA--CTCAACCA  1172
      |||||||   |||| |||||||  ||||||||
seq2  TCATCGT--GTCAGTTCAGTTATCCTCAACCA  1172


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