BAC Information

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BAC

Clone NameB6Ng01-317L04
Chromosome2 (Build37)
Map Location 46,814,492 - 46,815,245
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317L04.bB6Ng01-317L04.g
ACCGA107777GA107778
length1,220754
definitionB6Ng01-317L04.b B6Ng01-317L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatagattcttatatgtggagtctccagttgctcatcttcctac
tgttcaagtgtcttaattctttcaaagttaaaggccactactatacttac
acagtctcgtgaataaaccattttaagtgtaggaccactggtatttcaga
actgtctgatataaattttgaaattcaatccttgggatatcctgtgtcta
gacaattggtactgcctgagatttttatgatgacgtatattaatattttc
accaggagcatctaccattgtgcctctaatttcatcataagctgtctctg
gaattataggaatattaatttgaatacttcattactgtaaaaatcactgt
tcccattaatgtatgaaaatttcaggtaaataagttctgaactgtactat
aagaccttctcatcccacatatttgacctattgcatgctttgttttatct
gagataatttttgaaattttataaactctataaaccattcataattacaa
gaatttgtaaaaatgatagttataccagctccagtatccatcaaacctat
ttcaaacctatttaattgaacttttagttttggcctctgatcaataacca
ctgtttgccagacatacaattcccagtacttccaacacccaccccccaac
gttcttactactaaagcagctttgcctctaatgtagggaaacaatggcat
gtgagcaattttatctgtgttaatttacatcactttttataataggttat
atttttaagttcttctttaaaattcacagttgcaattcctgaatgctcaa
tgaatccttgagaagctaatccatttcttcaaaagaacatccctactgtc
tctgatgacgaaagaccataaacaccagtggtatgttgtaaaattgaatt
ttgtggtataaataagaggtgtgtgtatgcccatgtctagagaagtactg
cctatggtatggtatatgaacttggcatacttagttgcaggttcctgatt
gcttgttatttcctggctgaacagagggaaacagctcatattttagattt
gtgtatcaccttctgctcccaatttgtttctcaatgacaatattgtatta
ttggtattttttcttgactacacctcaatgtgtcccttgcacaacatctg
tacctagaagacatgcaatctcggaaattcattggccactagaaaatgta
gctgtatcttctccagacca

gaattccaaaattgactctctgttggacgaatgagatttggttgttatac
tgttggagaaattccaaataatcacaaagtaaagaataaaatttaaaata
aatttgtatttaagactaatacataattattatcaattaaatcaagagat
aaaatacagaaatgaagcatcaattcctctttggatgaaagtaagtgtgt
tattttgacaaataacacaagttcaatggctttataagtggtatatctga
aacaagagtggattttggtaaacaaatcaactagagcaatagcactattg
ctcatgtaattacattaattaaaatctaattattcatgtgtacacttttt
atcattttctgtggtagcagaccactgaagcactatcttttagaataaat
tactaaatgttgaatgctttaaaatgacctagcactgagttttaagttta
cccttttgagagcatcatctgatattaaaagataccagcagtttctggca
ctcactttcacatgtcaatgtgctcttaattggcgcctaaaagagcttgt
tgaaaacaattaaagatgacatgtaaaccaaaggggtagggttgtgggaa
accgctcacaaaacctttatggctttatttggtagaaaaaagcaaagata
aacatttccaatgaagaatctttggttttgtatagttctccaaaattgtg
atatatacatacaaatatatatatatatatatatatatatgtgtgtgtgt
gtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46814492_46815245
seq2: B6Ng01-317L04.g_66_819 (reverse)

seq1  ACACACACACACACATATATATATATATATATATATATATTTGTATGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACATATATATATATATATATATATATATTTGTATGTAT  50

seq1  ATATCACAATTTTGGAGAACTATACAAAACCAAAGATTCTTCATTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACAATTTTGGAGAACTATACAAAACCAAAGATTCTTCATTGGAAA  100

seq1  TGTTTATCTTTGCTTTTTTCTACCAAATAAAGCCATAAAGGTTTTGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCTTTGCTTTTTTCTACCAAATAAAGCCATAAAGGTTTTGTGAG  150

seq1  CGGTTTCCCACAACCCTACCCCTTTGGTTTACATGTCATCTTTAATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTCCCACAACCCTACCCCTTTGGTTTACATGTCATCTTTAATTGTT  200

seq1  TTCAACAAGCTCTTTTAGGCGCCAATTAAGAGCACATTGACATGTGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAAGCTCTTTTAGGCGCCAATTAAGAGCACATTGACATGTGAAAG  250

seq1  TGAGTGCCAGAAACTGCTGGTATCTTTTAATATCAGATGATGCTCTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCCAGAAACTGCTGGTATCTTTTAATATCAGATGATGCTCTCAAA  300

seq1  AGGGTAAACTTAAAACTCAGTGCTAGGTCATTTTAAAGCATTCAACATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAACTTAAAACTCAGTGCTAGGTCATTTTAAAGCATTCAACATTT  350

seq1  AGTAATTTATTCTAAAAGATAGTGCTTCAGTGGTCTGCTACCACAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTATTCTAAAAGATAGTGCTTCAGTGGTCTGCTACCACAGAAAA  400

seq1  TGATAAAAAGTGTACACATGAATAATTAGATTTTAATTAATGTAATTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAAAGTGTACACATGAATAATTAGATTTTAATTAATGTAATTACA  450

seq1  TGAGCAATAGTGCTATTGCTCTAGTTGATTTGTTTACCAAAATCCACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAATAGTGCTATTGCTCTAGTTGATTTGTTTACCAAAATCCACTCT  500

seq1  TGTTTCAGATATACCACTTATAAAGCCATTGAACTTGTGTTATTTGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGATATACCACTTATAAAGCCATTGAACTTGTGTTATTTGTCAA  550

seq1  AATAACACACTTACTTTCATCCAAAGAGGAATTGATGCTTCATTTCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACACACTTACTTTCATCCAAAGAGGAATTGATGCTTCATTTCTGTA  600

seq1  TTTTATCTCTTGATTTAATTGATAATAATTATGTATTAGTCTTAAATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTCTTGATTTAATTGATAATAATTATGTATTAGTCTTAAATACA  650

seq1  AATTTATTTTAAATTTTATTCTTTACTTTGTGATTATTTGGAATTTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTTAAATTTTATTCTTTACTTTGTGATTATTTGGAATTTCTCC  700

seq1  AACAGTATAACAACCAAATCTCATTCGTCCAACAGAGAGTCAATTTTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATAACAACCAAATCTCATTCGTCCAACAGAGAGTCAATTTTGGA  750

seq1  ATTC  754
      ||||
seq2  ATTC  754


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