MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-318J24
Chromosome	2 (Build37)
Map Location	19,996,157 - 19,997,220
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC667521, Armc3, Msrb2, LOC100041196, Ptf1a, LOC100041534, 4921504E06Rik, LOC100041244, Otud1, LOC667564, LOC100041302, LOC433406, LOC654360
Downstream gene	LOC667609, Etl4, Arhgap21, LOC433408, LOC675912
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667521 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Armc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70882 MGI:1918132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Msrb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76467 MGI:1923717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041196 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Ptf1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19213 MGI:1328312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041534 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	4921504E06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70909 MGI:1918087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs

name	Otud1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71198 MGI:1918448
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 47 ESTs, 1 Protein

name	LOC667564 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100041302 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins pseudo : _no_value

name	LOC433406 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC654360 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654360
definition	note : voltage-dependent anion channel 1 pseudogene pseudo : _no_value

name	LOC667609 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 4 Proteins pseudo : _no_value

name	Etl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208618 MGI:95454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arhgap21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71435 MGI:1918685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433408 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	LOC675912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Armc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487326 GeneID:70882 MGI:1918132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : armadillo repeat containing 3 transcript_id : NM_001081083.1

name	Msrb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753987 GeneID:76467 MGI:1923717
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methionine sulfoxide reductase B2 transcript_id : NM_029619.2

name	LOC100041196 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248909 GeneID:100041196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041196 transcript_id : XM_001475947.1

name	Ptf1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055317 GeneID:19213 MGI:1328312
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreas specific transcription factor, 1a transcript_id : NM_018809.1

name	LOC100041534 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248941 GeneID:100041534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : hypothetical protein LOC100041534 transcript_id : XM_001476886.1

name	4921504E06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801285 GeneID:70909 MGI:1918087
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921504E06 gene transcript_id : NM_027600.3

name	LOC100041244 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248913 GeneID:100041244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs product : similar to even skipped homeotic gene 2 homolog transcript_id : XM_001476036.1

name	Otud1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149248915 GeneID:71198 MGI:1918448
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 47 ESTs, 1 Protein product : OTU domain containing 1 transcript_id : XM_991213.2

name	Etl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486587 GeneID:208618 MGI:95454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enhancer trap locus 4 transcript_id : NM_001081006.1

name	Arhgap21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486928 GeneID:71435 MGI:1918685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 21 transcript_id : NM_001081364.1

name	LOC433408 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248928 GeneID:433408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : XM_488937.5

name	Armc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487327 GeneID:70882 MGI:1918132
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : armadillo repeat containing 3 protein_id : NP_001074552.1

name	Msrb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313208 CCDS:CCDS15714.1 GeneID:76467 MGI:1923717
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0000318 - protein-methionine-R-oxide reductase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IDA] GO_process : GO:0030091 - protein repair [Evidence IDA] codon_start : 1 product : pilin-like transcription factor protein_id : NP_083895.1

name	LOC100041196 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248910 GeneID:100041196
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475997.1

name	Ptf1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055318 CCDS:CCDS15715.1 GeneID:19213 MGI:1328312
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence TAS] [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence TAS]; GO:0005515 - protein binding [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009790 - embryonic development [Evidence ISS] [Evidence IMP]; GO:0031017 - exocrine pancreas development [Evidence ISS]; GO:0048699 - generation of neurons [Evidence ISS]; GO:0030902 - hindbrain development [Evidence ISS]; GO:0048663 - neuron fate commitment [Evidence IDA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] [Evidence ISS]; GO:0048384 - retinoic acid receptor signaling pathway [Evidence ISS]; GO:0009888 - tissue development [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : pancreas transcription factor1 p48 subunit product : pancreas specific transcription factor, 1a protein_id : NP_061279.1

name	LOC100041534 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248942 GeneID:100041534
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476936.1

name	4921504E06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328303 CCDS:CCDS15716.1 GeneID:70909 MGI:1918087
definition	codon_start : 1 product : hypothetical protein LOC70909 protein_id : NP_081876.2

name	LOC100041244 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248914 GeneID:100041244
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476086.1

name	Otud1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149248916 GeneID:71198 MGI:1918448
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : OTU domain containing 1 protein_id : XP_996307.2 transl_except : (pos:19580167..19580169,aa:OTHER) transl_except : (pos:19580440..19580442,aa:OTHER) transl_except : (pos:19580476..19580478,aa:OTHER) transl_except : (pos:19580518..19580520,aa:OTHER) transl_except : (pos:19580623..19580625,aa:OTHER) transl_except : (pos:19580770..19580772,aa:OTHER) transl_except : (pos:19580776..19580778,aa:OTHER) transl_except : (pos:19580788..19580790,aa:OTHER) transl_except : (pos:19580830..19580832,aa:OTHER)

name	Etl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486588 GeneID:208618 MGI:95454
definition	codon_start : 1 note : sickle tail product : enhancer trap locus 4 protein_id : NP_001074475.1

name	Arhgap21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486929 GeneID:71435 MGI:1918685
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 21 protein_id : NP_001074833.1

name	LOC433408 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94366039 GeneID:433408
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488937.4

name	LOC667521 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667521
definition	number : 1 pseudo : _no_value

name	LOC667564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667564
definition	number : 1 pseudo : _no_value

name	LOC667564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667564
definition	number : 2 pseudo : _no_value

name	LOC667564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667564
definition	number : 3 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 10 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 9 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 8 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 7 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 6 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 5 pseudo : _no_value

name	LOC100041302 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248921 GeneID:100041302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to NAB1 pseudo : _no_value transcript_id : XR_032561.1

name	LOC433406 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:84579876 GeneID:433406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase 4a1-like pseudo : _no_value transcript_id : NR_002688.1

name	LOC667609 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248926 GeneID:667609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 4 Proteins product : similar to mitochondrial ribosomal protein S5 pseudo : _no_value transcript_id : XR_032582.1

clone name	MSMg01-505D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323F19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-342N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182A09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-155A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415E13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-410H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435L20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-166G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372M01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-535D06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-062I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-318J24.g
ACC		GA108465
length		1,078
definition		B6Ng01-318J24.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattcttactgtaagccgcagagctagctttctgtaaaatttaacctgc agagtcttatgagagtacgaaagagatggtggacccaagtaagagatcac tggttattcaaatttctgtaactccacatttgcataattttccacacaat taaaatgtagattcctttaaaaatgagcttagtggccctcctctcagcaa cacatccatatcctatgtaatgcactgctggacaattgcctacacacacc aagcacttggtaagttcctgggaaacttagaattattggttctaggttcc ctcccaattctaagaacacccaaactaccagaggctcaagtcctttctat aaaatggggtagtgttgcatcaaacctcttgaacactacaaatcatctca gccgacttataataaatatcaaattcagtgcaaatgtggtgaaaacagtg gttcctgagggagtggggacaagaggtagcctgcacctgtttcatgcaga tgcagtttcaagagcagcacttttgatctgtactcagttgactctgcaga tttggtacccatggatatgaagggccagctaaatttgcatatatcagtag gacccagaaccagttttcagaggaagcagcctgcagtgcttacaaaatta tggagactatttagcccagatttcatatttttacagaggaagagacacag attggaatgttaattaaagaaaatcacaccaacttaaagagtcaggtggt agagaatttaggcttcggaacttcttgtctaggattcttttcaagtccct acacagcatataaggagaaaattattcaaaaatctcaatatgatgacgca aagcacttccaagccacccatgaatgatgcatctgaaaggcaattagtaa aacactctgggtagcaagagctgtagactgaattttctatatagattgta ctttgaataatgcataccttaattatatatataagtttgtaataccttat aatacaatatgtatataaaattaatatttatttagctggtgttattattc tgaaaggcctaacgtaaccagtggcttt
quality values		Open. Hide. 46 31 47 31 62 62 42 23 39 31 20 38 12 14 15 17 24 27 27 32 26 14 39 33 32 31 19 37 32 32 24 32 32 32 51 51 30 38 51 51 42 35 34 34 24 34 41 30 38 34 25 17 44 34 41 45 32 41 34 24 30 34 17 39 30 24 24 39 18 43 30 34 45 51 30 43 43 39 43 18 43 41 46 43 51 45 43 41 34 43 24 30 26 34 18 24 44 41 43 43 30 44 39 34 41 51 41 34 43 41 34 39 43 30 34 30 24 41 24 24 34 30 39 30 43 18 30 34 43 41 41 43 43 30 43 41 39 39 51 41 30 34 34 24 34 30 41 24 30 30 34 34 41 34 43 43 51 43 43 23 51 34 30 34 34 30 30 30 30 34 45 45 51 43 34 41 18 34 30 24 43 34 30 51 43 39 45 43 41 43 43 41 43 43 43 41 24 39 30 30 41 36 34 24 34 30 30 18 30 24 34 24 41 34 41 41 43 34 34 43 34 56 43 43 39 41 44 30 34 43 45 43 39 34 36 43 43 39 30 31 24 30 30 30 43 30 43 30 43 36 30 30 30 30 30 34 34 30 51 39 29 35 42 35 35 35 51 41 22 36 27 32 35 32 42 35 32 32 27 10 44 35 39 39 51 42 26 39 32 26 32 35 35 35 35 51 39 37 36 38 42 32 32 31 26 25 23 27 42 42 33 42 42 23 51 31 34 26 33 39 31 26 38 30 42 31 32 31 31 21 15 42 26 56 31 33 33 29 32 35 34 31 33 31 34 38 39 26 32 30 15 21 20 31 23 38 27 27 39 27 33 23 21 43 21 27 38 23 31 38 30 27 32 43 38 33 42 33 38 28 38 31 33 32 29 39 39 34 42 30 34 43 38 42 42 42 42 42 42 30 17 27 28 18 34 22 27 22 18 27 20 42 42 42 42 35 46 38 38 31 21 26 27 27 27 27 32 27 42 52 27 17 13 26 33 34 37 46 47 23 37 42 42 32 32 35 35 35 35 52 52 47 42 50 52 42 52 42 30 52 52 52 39 42 49 39 47 52 38 34 34 42 32 49 31 52 32 30 27 27 32 33 50 33 17 30 31 28 50 39 35 28 50 32 52 52 42 27 22 52 39 52 52 29 35 24 31 34 46 31 34 34 42 46 50 50 27 35 35 46 46 40 33 40 47 50 49 29 58 50 49 22 41 54 41 33 28 32 33 37 41 37 41 42 50 50 50 37 27 51 46 40 42 41 43 40 39 39 50 40 37 37 37 44 35 40 37 41 50 54 53 25 48 37 26 52 40 32 53 53 40 50 37 52 50 41 41 42 42 50 32 53 50 51 40 41 50 43 41 32 49 50 37 34 39 37 19 58 43 27 44 50 53 52 50 50 50 40 33 15 46 16 49 47 41 30 50 42 43 50 50 50 52 52 39 50 35 49 28 40 50 33 37 14 38 40 37 35 42 39 52 41 47 50 40 37 29 42 42 31 37 52 39 32 31 33 24 15 27 42 37 46 32 39 39 39 49 31 52 52 50 35 32 52 18 37 34 20 29 52 41 22 31 34 40 31 29 45 40 33 30 34 52 52 37 47 26 33 39 32 21 30 40 42 53 32 44 42 29 41 52 52 19 31 37 30 42 34 33 31 29 13 27 41 26 33 45 40 27 39 24 31 36 26 32 51 26 21 34 32 32 33 53 26 41 32 32 51 42 15 9 34 34 27 35 21 13 24 52 31 34 28 32 17 9 16 42 29 27 16 18 6 31 27 23 27 31 31 46 46 26 23 12 33 43 34 20 36 31 18 18 31 22 33 31 32 31 29 31 33 22 12 27 8 46 22 26 46 42 31 31 16 14 24 31 12 20 28 29 42 37 21 24 31 31 20 21 21 31 18 18 31 25 20 29 29 21 13 32 24 32 31 29 27 14 21 32 21 31 21 26 25 27 7 9 22 24 32 18 11 31 31 34 19 23 13 13 22 30 32 21 27 24 27 20 31 31 24 10 22 21 25 17 22 15 30 30 19 27 28 30 25 31 24 34 32 34 19 11 41 38 17 29 28 18 17 18 19 20 10 32 31 31 13 25 21 33 27 31 18 23 21 42 38 36 19 26 13 25 16 13 14 10 7 23 23 14 24 14 10 17 24 36 33 25 19 34 19 14 16 4 16 24 26 27 34 15 17 34 25 24 14 25 17 18 6 6 10 13 18 19 16 11 6 4 5 7 9 29 9 21 9 10 13 16 8 14 5 10 7 18 24 9 4 3 6 5 6 5 8 20 5 9 6 10 9 7 27 28 10 3 5 4 12 6 9 15 23 7 7 13 34 21 6 5 9 13 14 5 4 5 5 9 9 5 12 10 24 20 7 8 6 3 29 16 10 6 14 25 6 17 9 1 3 5 9 4 7 7 7 10 6 5 16 4 4 20 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_19996157_19997220
seq2: B6Ng01-318J24.g_65_1142 (reverse)

seq1  AAAGCCACT-GTTACCTTTGGCTTTCCAG-ATA--TACA-CAGCTAAAT-  44
      ||||||||| ||||| || ||| || ||| |||   ||| ||||||||| 
seq2  AAAGCCACTGGTTACGTTAGGCCTTTCAGAATAATAACACCAGCTAAATA  50

seq1  AATATTAAATTTTATATACATA-TGTATTATAA-GTA-TACAA--CTATA  89
      |||||| ||||||||||||||| |||||||||| ||| |||||   ||||
seq2  AATATT-AATTTTATATACATATTGTATTATAAGGTATTACAAACTTATA  99

seq1  TATATAATTAA-GTATGCATTATTCAAAGTACAATCTATATAGAAAATTC  138
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATATAATTAAGGTATGCATTATTCAAAGTACAATCTATATAGAAAATTC  149

seq1  AGTCTACAGCTCTTGCTACCCAGAGTGTTTTACTAATTGCCTTTCAGATG  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACAGCTCTTGCTACCCAGAGTGTTTTACTAATTGCCTTTCAGATG  199

seq1  CATCATTCATGG--TGCTTGG-AGTGCTTTGCGTCATCATATTGAGATTT  235
      ||||||||||||   |||||| ||||||||||||||||||||||||||||
seq2  CATCATTCATGGGTGGCTTGGAAGTGCTTTGCGTCATCATATTGAGATTT  249

seq1  TTGAATAATTTTCTCCTTATATGCTGTGTAGGGACTTGAAAAGAATCCTA  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAATTTTCTCCTTATATGCTGTGTAGGGACTTGAAAAGAATCCTA  299

seq1  GACAAGAAGTTCCGAAGCCTAAATTCTCTACCACCTGACTCTTTAAGTTG  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAAGTTCCGAAGCCTAAATTCTCTACCACCTGACTCTTTAAGTTG  349

seq1  GTGTGATTTTCTTTAATTAACATTCCAATCTGTGTCTCTTCCTCTGTAAA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTTTCTTTAATTAACATTCCAATCTGTGTCTCTTCCTCTGTAAA  399

seq1  AATATGAAATCTGGGCTAAATAGTCTCCATAATTTTGTAAGCACTGCAGG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAAATCTGGGCTAAATAGTCTCCATAATTTTGTAAGCACTGCAGG  449

seq1  CTGCTTCCTCTGAAAACTGGTTCTGGGTCCTACTGATATATGCAAATTTA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCTCTGAAAACTGGTTCTGGGTCCTACTGATATATGCAAATTTA  499

seq1  GCTGGCCCTTCATATCCATGGGTACCAAATCTGCAGAGTCAACTGAGTAC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCCTTCATATCCATGGGTACCAAATCTGCAGAGTCAACTGAGTAC  549

seq1  AGATCAAAAGTGCTGCTCTTGAAACTGCATCTGCATGAAACAGGTGCAGG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAAGTGCTGCTCTTGAAACTGCATCTGCATGAAACAGGTGCAGG  599

seq1  CTACCTCTTGTCCCCACTCCCTCAGGAACCACTGTTTTCACCACATTTGC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCTTGTCCCCACTCCCTCAGGAACCACTGTTTTCACCACATTTGC  649

seq1  ACTGAATTTGATATTTATTATAAGTCGGCTGAGATGATTTGTAGTGTTCA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTTGATATTTATTATAAGTCGGCTGAGATGATTTGTAGTGTTCA  699

seq1  AGAGGTTTGATGCAACACTACCCCATTTTATAGAAAGGACTTGAGCCTCT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTGATGCAACACTACCCCATTTTATAGAAAGGACTTGAGCCTCT  749

seq1  GGTAGTTTGGGTGTTCTTAGAATTGGGAGGGAACCTAGAACCAATAATTC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTGGGTGTTCTTAGAATTGGGAGGGAACCTAGAACCAATAATTC  799

seq1  TAAGTTTCCCAGGAACTTACCAAGTGCTTGGTGTGTGTAGGCAATTGTCC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTCCCAGGAACTTACCAAGTGCTTGGTGTGTGTAGGCAATTGTCC  849

seq1  AGCAGTGCATTACATAGGATATGGATGTGTTGCTGAGAGGAGGGCCACTA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGCATTACATAGGATATGGATGTGTTGCTGAGAGGAGGGCCACTA  899

seq1  AGCTCATTTTTAAAGGAATCTACATTTTAATTGTGTGGAAAATTATGCAA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATTTTTAAAGGAATCTACATTTTAATTGTGTGGAAAATTATGCAA  949

seq1  ATGTGGAGTTACAGAAATTTGAATAACCAGTGATCTCTTACTTGGGTCCA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGTTACAGAAATTTGAATAACCAGTGATCTCTTACTTGGGTCCA  999

seq1  CCATCTCTTTCGTACTCTCATAAGACTCTGCAGGTTAAATTTTACAGAAA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTTTCGTACTCTCATAAGACTCTGCAGGTTAAATTTTACAGAAA  1049

seq1  GCTAGCTCTGCGGCTTACAGTAAGAATTC  1064
      |||||||||||||||||||||||||||||
seq2  GCTAGCTCTGCGGCTTACAGTAAGAATTC  1078

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information