BAC Information

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BAC

Clone NameB6Ng01-318M02
Chromosome2 (Build37)
Map Location 29,755,088 - 29,755,235
singlet/doubletsinglet
Overlap geneOdf2
Upstream geneDdx31, Barhl1, LOC100033452, 1700101E01Rik, LOC100039666, Ttf1, Setx, Ntng2, Crsp8, Rapgef1, LOC433415, OTTMUSG00000012686, Trub2, Coq4, Slc27a4, Urm1, LOC100041002, Ceecam1
Downstream geneGle1l, Spna2, LOC665532, Wdr34, Set, Pkn3, Zdhhc12, Zer1, LOC100041114, Tbc1d13, Slc39a1-ps, Endog, D2Wsu81e, Ccbl1, 1700084E18Rik, Lrrc8a, Phyhd1, Dolk, Nup188, Sh3glb2, 5730472N09Rik, Dolpp1, Crat, Ppp2r4, Ier5l, Cstad, EG665645, 1700001O22Rik, 2610205E22Rik, Asb6, Prrx2, Ptges
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318M02.bB6Ng01-318M02.g
ACCGA108562GA108563
length1,002534
definitionB6Ng01-318M02.b B6Ng01-318M02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggtatacgtataaccttgttgcttattaaaggtcaaagcaa
acttgtactttaataactatgtgtatttgatgtattcatgaagacatagc
ttgccatgcatgagggtgacagaggacagccttggacacttcccgaagta
ctgtccaccttggattttgagaaatgggggggtcactcaccagctaggct
aggccgactgcctgggccattcagcccagtggatccacctctctgcctgc
agagctagggttataagtgtgtaccactatgcctggctcttttgtgtaag
ttctagggatttaattcagaattttttctttttaagagaaaaattgtttt
tcttctaaaatattaaatatttgctactgcagaacatggctcgtttttca
ttttagttgatattttgcttttgtaatcatcaattctgatgattccattt
tacagaaaataaaaatcatacaagatggcagtaatatgtttagagccatt
tcaaaaattgttgggaaattatgtgctaatcccaaaccaatgttcatttg
atgaattttttttttaatgaaattcaagttagcaactcagaactgcaatt
taaaaatcagcattttagggctaaagagatgagtcagcagttaagaacac
tgactgctcttccagaggtcctgagttcaattccctgcaaccacatggta
tctcacgaccatctgtaatgttatctgatgccctcttctggtctgaagac
agctacagtgtactcatattaaataaataaataaatactttttaaaaaac
agcattttaatacaatataattgaaagcaacatactaatttcatatctat
gtttcctaatgacaggaaaatattctttgttttctgtaaacagttatgtt
tctttaagagcagacacttttgtctgaacagcagcagcactgcaattcat
gacatgcatccgtccccagtctgagccaaggcattcagacagtatccact
gg
atctctctctgcttcctgactgtggatgtcatgcatggcggtttgaatga
gaacggtccccacaggcttatgggttggaatgcttggtcaccagggagtg
gcactacttggaaggattaggaggtgtggccttgttggaggaagcatgtc
actggggtgggctttgagattttaaagatcccagcatctctctcttcttg
ctgccttcagatctgatgtagaagtcccagctacttctccaccaccatgt
ctacctgccatgcttctatcatgacgacattgggctaaacttccgaaact
gtgagccagccccatttaaatgctttctgttataagagttgcttatggtc
atggtgtcttttcatagcaatagaacaccgaccaaggcatcgtatgacca
agatcctcacattcctaccaggacaagctgtgccctctaactgtgagccg
aaccaaatcccttctctattaagctgcctttgtcatatgctttgtcacag
aagaagaaagaaagggagggagggagggagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_29755088_29755235
seq2: B6Ng01-318M02.b_695_829 (reverse)

seq1  ATTTATTTATTTAATATATATGGGTACACCACACCGATGCTGTCTTCAGA  50
      |||||||||||||    ||||| ||     |||| |  ||||||||||| 
seq2  ATTTATTTATTTA----ATATGAGT-----ACACTGTAGCTGTCTTCAG-  40

seq1  CACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCTACCA  100
         ||||||||||||||||||||  ||||||||||||| ||||| |||||
seq2  ---ACCAGAAGAGGGCATCAGATAACATTACAGATGGTCGTGAGATACCA  87

seq1  TGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAAAAGTCAGTG  148
      ||||||||| ||||||||||||||||||||||||||||  ||||||||
seq2  TGTGGTTGCAGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTG  135