BAC Information

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BAC

Clone NameB6Ng01-318M20
Chromosome2 (Build37)
Map Location 69,852,813 - 69,853,916
singlet/doubletsinglet
Overlap genenone
Upstream geneLass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650
Downstream geneMyo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318M20.bB6Ng01-318M20.g
ACCGA108597GA108598
length1,1141,148
definitionB6Ng01-318M20.b B6Ng01-318M20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgacttccattggcttttgctacctcttcttagtttgtcagctc
ttgattttagagtccatgttctcattagtttagaattagaacacgatgta
catgagtgggcacagtagaaagcagaagaaaaaatttaaataagaatttg
attattaaaaaaagcatgttcaatcaagttccaaagccagaagctccaaa
attatctagataaattccattcattagctagaaaatacttgttgctagag
tttcattttgaagaaaagtttgtggaaacgagacagtatagtggacattt
tggggttcacagtctagggaaaaggatacagcaacatggatgacacactg
agcatcaacaggcaagcatcatcaagtaacacatctgtgggccagctagg
gatgctgccactgtttagggtggcaccagaggtgtggctcggcgagaatg
cttgtctagcaggcctaagctgtgggtttgatcccttgacatagatggta
gtgaagtgggacatgagaggggacagtaagagtgcaggacaaactacatt
tcctggtatttatttagttattctttatatttaaaagtatagttaatgag
taaaatgatatcatagaaaaatatttcttctgatttatatacattattat
tatactttatgtatttttactattatttaatataatagtaagagatacaa
ttctctgatataaagatcatattgaaaatttttatttataactttttctt
ataaaaatagaagtggttattgttattaagcttcatttataggacattat
ctaatgtgattgtttatatattgtgtgatatcacacattttatcacagtt
acattttttacagtaaagttaaaaagaaactttagggaatctgcaaacat
taaaggcctttttttttttttttttttaaacttcatatgaaaatgactta
tgccacttgttcaggagggctgttttatacacacttttacttgactcttt
gcaaacatttttcatatggttcaaatttgttgtatttgttgctgtaagta
ttttctggagtcagtgtccttagtcaggcgactacttagaatggagtttc
ctcagcagtggaag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattttaaaaaatgaatttatgaaactcctaggcaa
atggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaacttgcaaaacgcatgaaattcaa
gaagaacgaagaccgaagtgtggacactttaccctttcttagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatgcagggatccatcccataat
cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaa
agggacccagatatagctgtctcttgtgagactatgccggggccctagca
aacacagaagtggatgatcacagtcagcaattggatgggtcacacggccc
ccaatggaggagctagagaaagtacccaagagctaaggaactgcacccta
tagatggacacaatatgactaccagtaccggagctcttgtctttagctgc
atatgttatcaaaagaatgctagtcgtcatcactgccaagagaggcccat
gaacttggcaactttaatattccctcaagttaaccagggggatacggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69852813_69853916
seq2: B6Ng01-318M20.b_46_1159

seq1  GAATTCTGACTTCCATTGGCTTTTGCTACCTCTTCTTAGTTTGTCAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTTCCATTGGCTTTTGCTACCTCTTCTTAGTTTGTCAGCTC  50

seq1  TTGATTTTAGAGTCCATGTTCTCATTAGTTTAGAATTAGAACACGATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTAGAGTCCATGTTCTCATTAGTTTAGAATTAGAACACGATGTA  100

seq1  CATGAGTGGGCACAGTAGAAAGCAGAAGAAAAAATTTAAATAAGAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTGGGCACAGTAGAAAGCAGAAGAAAAAATTTAAATAAGAATTTG  150

seq1  ATTATTAAAAAAAGCATGTTCAATCAAGTTCCAAAGCCAGAAGCTCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAAAAAAGCATGTTCAATCAAGTTCCAAAGCCAGAAGCTCCAAA  200

seq1  ATTATCTAGATAAATTCCATTCATTAGCTAGAAAATACTTGTTGCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTAGATAAATTCCATTCATTAGCTAGAAAATACTTGTTGCTAGAG  250

seq1  TTTCATTTTGAAGAAAAGTTTGTGGAAACGAGACAGTATAGTGGACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTGAAGAAAAGTTTGTGGAAACGAGACAGTATAGTGGACATTT  300

seq1  TGGGGTTCACAGTCTAGGGAAAAGGATACAGCAACATGGATGACACACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTCACAGTCTAGGGAAAAGGATACAGCAACATGGATGACACACTG  350

seq1  AGCATCAACAGGCAAGCATCATCAAGTAACACATCTGTGGGCCAGCTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAACAGGCAAGCATCATCAAGTAACACATCTGTGGGCCAGCTAGG  400

seq1  GATGCTGCCACTGTTTAGGGTGGCACCAGAGGTGTGGCTCGGCGAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCCACTGTTTAGGGTGGCACCAGAGGTGTGGCTCGGCGAGAATG  450

seq1  CTTGTCTAGCAGGCCTAAGCTGTGGGTTTGATCCCTTGACATAGATGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTAGCAGGCCTAAGCTGTGGGTTTGATCCCTTGACATAGATGGTA  500

seq1  GTGAAGTGGGACATGAGAGGGGACAGTAAGAGTGCAGGACAAACTACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTGGGACATGAGAGGGGACAGTAAGAGTGCAGGACAAACTACATT  550

seq1  TCCTGGTATTTATTTAGTTATTCTTTATATTTAAAAGTATAGTTAATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTATTTATTTAGTTATTCTTTATATTTAAAAGTATAGTTAATGAG  600

seq1  TAAAATGATATCATAGAAAAATATTTCTTCTGATTTATATACATTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGATATCATAGAAAAATATTTCTTCTGATTTATATACATTATTAT  650

seq1  TATACTTTATGTATTTTTACTATTATTTAATATAATAGTAAGAGATACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTATGTATTTTTACTATTATTTAATATAATAGTAAGAGATACAA  700

seq1  TTCTCTGATATAAAGATCATATTGAAAATTTTTATTTATAACTTTTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGATATAAAGATCATATTGAAAATTTTTATTTATAACTTTTTCTT  750

seq1  ATAAAAATAGAAGTGGTTATTGTTATTAAGCTTCATTTATAGGACATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAGAAGTGGTTATTGTTATTAAGCTTCATTTATAGGACATTAT  800

seq1  CTAATGTGATTGTTTATATATTGTGTGATATCACACATTTTATCACAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTGATTGTTTATATATTGTGTGATATCACACATTTTATCACAGTT  850

seq1  ACA-TTTTTACAGTAAAGTTAAAAAGAAACTTTAGGGAATCTGCAAACAT  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTACAGTAAAGTTAAAAAGAAACTTTAGGGAATCTGCAAACAT  900

seq1  T-AAGGCC--TTTTTTTTTTTTTTTTTAAACTTCATATG-AAATGACTTA  945
      | ||||||  ||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAGGCCTTTTTTTTTTTTTTTTTTTAAACTTCATATGAAAATGACTTA  950

seq1  TGCCACT--GTCAGGA-GGCTG-TTTATACACACTTTTACTTGACTCTTT  991
      |||||||   |||||| ||||| |||||||||||||||||||||||||||
seq2  TGCCACTTGTTCAGGAGGGCTGTTTTATACACACTTTTACTTGACTCTTT  1000

seq1  GCAAACATTTTTCATATGGTTCAAATTTGTTGTATTTGTTGCCTGTAAAG  1041
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  GCAAACATTTTTCATATGGTTCAAATTTGTTGTATTTGTTG-CTGT-AAG  1048

seq1  TA-TTTCT-GAGTCAGTGTTCCCTAGGCCAGGCGACTACTTAGGAT-GAG  1088
      || ||||| ||||||||||  |||  | ||||||||||||||| || |||
seq2  TATTTTCTGGAGTCAGTGT--CCTTAGTCAGGCGACTACTTAGAATGGAG  1096

seq1  TT--CTCAGCAGTGGAAG  1104
      ||  ||||||||||||||
seq2  TTTCCTCAGCAGTGGAAG  1114