BAC Information

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BAC

Clone NameB6Ng01-319B08
Chromosome2 (Build37)
Map Location 96,715,964 - 96,717,110
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043267, Lrrc4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319B08.bB6Ng01-319B08.g
ACCGA108807GA108808
length9471,151
definitionB6Ng01-319B08.b B6Ng01-319B08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctctctctttctatcttctctctttttctctgactttccacaa
taaagctctaaatcatagactgtctctgcttatcaaggccaccttgcttg
aaagaagggataggccttctcctaatgagccacatctaacctcccaccag
atggccttcctgtgttgcagccatggaccggaccaaagactgtctgtggg
aaccacctagtgccctctcttcttgccctctcctccctcctaccctgggg
ctgaccaagctgcctgagctgcatgggggggggggagggcattctgttct
tagctcttcggtggtatttagcatgggatgcccaaggctgagaatatggt
acttagggctgccccttgtccatcccccagcgagctgagattatgtggct
tcacacagccaggcacccacgtgggccacatggaaagcatgtggcagtcc
ttccatgtctgctcacccagagcacaggaaatctggttggatgcgtgttt
tatcccactccctttatccctcgggtgccctctacccctcaaatagcatg
cacagatatatgcatttcattctataagttatattactctaaaggaccct
gataaattaaagactggcttgggaggcagcctcagcctcagcagcattgg
ttgccatcttggttccgggtctcagcagaacttaggaaattagtctgaac
aggtgagagggtgcgccagagaaccggacagctttctgggacaggcagaa
gcacagagccgctgagacagcacccttgggggccgcagacagctggccac
catccggaccagaggacaggtgtccgcctggcttgggaggcggcctcagc
ctcatcagcagcggtcgccatccttgattcccgggaactccctggaactt
aggaatttagtccggcataggtgaaagtctgcaccaccagaagctga

gaattcctatagctttaagctgctttgaaaattcttttttttctttcttt
ctgccctttgtgtaattcttacagtattatgcttgtttctgtcagagtcc
tatgtagcccagggtggtcctttaattcattttattttattttattttat
tttattttattttattttattttattttattttattttattttattttta
tcgagttccactgatactgggcggattggcaacacaccttcctggtgata
cagaggccatcactctccttcctggtgagaaaggtattttcacaacctag
acagagattgtgctttggagagatatatttgactcaaactcaccgtaagt
gttttacaaacagattgtccatgacatgtacatatgcttcactattcccc
aagaaacaatgccaattctgtctgccaatagcagatcatgctatttaaag
taactgcaagagaggctgctggcaagatgtctcagcaggtaaaggcactt
gtttccaagcctgccagggacctgagtctgatcccaggttctgcaaagta
agagtagagagctgaccccttgcaagttgctcttatgtctccagatgcat
gttgtgagcatgcaaatatatcccctttctttcatcctgtgttttgcttc
attatttgtgactttttgtttttttattttagcatcttgagtcagcagga
atttgggatccaaaacgaccacttttataagtgctaatcaaatactgttg
tttctattgtcgtttattagaggagaaagtgtagtaactgcttaaataga
ggttttgatctaatgtacacatattttgaataaatattttcatactatca
atgattattagtatatttcttcattatttacttggatttttgtgaactaa
catataaatttatattacattctgttcattggtaataagcaatctatgct
gttttagcttataatgtcagtagcagatatttaaactactacctttttct
agaaaataacattaaaatgatttgaaacattatttagtgaatgaataact
tctaagaagtaacctctggccttttttaatccaaagccttcatctttctt
aagaatctttggagagtactgatccaatttcctgtcaagcttactagcaa
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96715964_96717110
seq2: B6Ng01-319B08.g_67_1217

seq1  GAATTCCTATAGCTTTAAGCTGCTTTGAAAATTCTTTTTTTTCTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAGCTTTAAGCTGCTTTGAAAATTCTTTTTTTTCTTTCTTT  50

seq1  CTGCCCTTTGTGTAATTCTTACAGTATTATGCTTGTTTCTGTCAGAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTTGTGTAATTCTTACAGTATTATGCTTGTTTCTGTCAGAGTCC  100

seq1  TATGTAGCCCAGGGTGGTCCTTTAATTCATTTTATTTTATTTTATTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGCCCAGGGTGGTCCTTTAATTCATTTTATTTTATTTTATTTTAT  150

seq1  TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTA  200

seq1  TCGAGTTCCACTGATACTGGGCGGATTGGCAACACACCTTCCTGGTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTTCCACTGATACTGGGCGGATTGGCAACACACCTTCCTGGTGATA  250

seq1  CAGAGGCCATCACTCTCCTTCCTGGTGAGAAAGGTATTTTCACAACCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCCATCACTCTCCTTCCTGGTGAGAAAGGTATTTTCACAACCTAG  300

seq1  ACAGAGATTGTGCTTTGGAGAGATATATTTGACTCAAACTCACCGTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATTGTGCTTTGGAGAGATATATTTGACTCAAACTCACCGTAAGT  350

seq1  GTTTTACAAACAGATTGTCCATGACATGTACATATGCTTCACTATTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAAACAGATTGTCCATGACATGTACATATGCTTCACTATTCCCC  400

seq1  AAGAAACAATGCCAATTCTGTCTGCCAATAGCAGATCATGCTATTTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAATGCCAATTCTGTCTGCCAATAGCAGATCATGCTATTTAAAG  450

seq1  TAACTGCAAGAGAGGCTGCTGGCAAGATGTCTCAGCAGGTAAAGGCACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCAAGAGAGGCTGCTGGCAAGATGTCTCAGCAGGTAAAGGCACTT  500

seq1  GTTTCCAAGCCTGCCAGGGACCTGAGTCTGATCCCAGGTTCTGCAAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAAGCCTGCCAGGGACCTGAGTCTGATCCCAGGTTCTGCAAAGTA  550

seq1  AGAGTAGAGAGCTGACCCCTTGCAAGTTGCTCTTATGTCTCCAGATGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGAGAGCTGACCCCTTGCAAGTTGCTCTTATGTCTCCAGATGCAT  600

seq1  GTTGTGAGCATGCAAATATATCCCCTTTCTTTCATCCTGTGTTTTGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAGCATGCAAATATATCCCCTTTCTTTCATCCTGTGTTTTGCTTC  650

seq1  ATTATTTGTGACTTTTTGTTTTTTTATTTTAGCATCTTGAGTCAGCAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGTGACTTTTTGTTTTTTTATTTTAGCATCTTGAGTCAGCAGGA  700

seq1  ATTTGGGATCCAAAACGACCACTTTTATAAGTGCTAATCAAATACTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGATCCAAAACGACCACTTTTATAAGTGCTAATCAAATACTGTTG  750

seq1  TTTCTATTGTCGTTTATTAGAGGAGAAAGTGTAGTAACTGCTTAAATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTGTCGTTTATTAGAGGAGAAAGTGTAGTAACTGCTTAAATAGA  800

seq1  GGTTTTGATCTAATGTACACATATTTTGAATAAATATTTTCATACTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGATCTAATGTACACATATTTTGAATAAATATTTTCATACTATCA  850

seq1  ATGATTATTAGTATATTTCTTCATTATTTACTTGGATTTTTGTGAACTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTATTAGTATATTTCTTCATTATTTACTTGGATTTTTGTGAACTAA  900

seq1  CATATAAATTTATA-TACATTCTGTTCATTGGTAATAAGCAATCTATGCT  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATATAAATTTATATTACATTCTGTTCATTGGTAATAAGCAATCTATGCT  950

seq1  GTTTTAGCTTATAATGTCAGTAGCAGATATTTAAACTACTACC-TTTTCT  998
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTTTTAGCTTATAATGTCAGTAGCAGATATTTAAACTACTACCTTTTTCT  1000

seq1  AG-AAATAACATTTAAAATGATTTGATACA-TATTTAGTGAATGAATTAA  1046
      || |||||||| |||||||||||||| ||| |||||||||||||||| | 
seq2  AGAAAATAACA-TTAAAATGATTTGAAACATTATTTAGTGAATGAATAAC  1049

seq1  CTCTAAG-AGTAACCTCTGCCCTTTTTTAAATTCCCATAGCTTCATC-TT  1094
       |||||| ||||||||||| ||||||||||  ||| |   ||||||| ||
seq2  TTCTAAGAAGTAACCTCTGGCCTTTTTTAA--TCCAAAGCCTTCATCTTT  1097

seq1  CTT-AGAATCTTT-GAGAGTAACTG-GCCCATTTCCTGCCAGCCTCTACT  1141
      ||| ||||||||| |||||| ||||  || |||||||| ||  || ||||
seq2  CTTAAGAATCTTTGGAGAGT-ACTGATCCAATTTCCTGTCAAGCT-TACT  1145

seq1  AGCAAC  1147
      ||||||
seq2  AGCAAC  1151


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