BAC Information

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BAC

Clone NameB6Ng01-319D18
Chromosome2 (Build37)
Map Location 45,425,944 - 45,427,055
singlet/doubletsinglet
Overlap genenone
Upstream geneGtdc1, Zeb2
Downstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319D18.b
ACCGA108919
length1,112
definitionB6Ng01-319D18.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtctgtctgcatgctccgtatggaatgctatgtttatttttgt
gactttggcaacttgatcaacttcatacatgaaccattggttaagtgaga
gtaggcagggggtttcgagaaccaagaaaaaaaagcagaaaaatggtaca
aaatgagacaaacagttgtaaaatttagaatcttaggactttagataact
gcctttttcacttcgcatggactcataaaaccgcaatacaaatattaact
gagaaaaggtcctatttgtaatatctctaggggtgaaaataagcatgatg
acacattgaaaattaaaaatgtgtttttcatgatatcatatatgacaaat
taaaaaatacacttactggtcatataagagttatgaatatgtttctgtaa
aaacacagagaagcaaatcattagtagttctgtctatctctctctgtgtc
tctgtctctgtctctgtctctctgtctctctctctctgtctctctctctc
tgtctctctctctctctctctctcacacacacacacacacacacacacac
acatcaccttggttcatcttttattggtatatgttataagaattgaatct
ggaatacaaaggtaaaaacagatttagtatgtttcaaatgcctcaaacta
tataatctcattgctctatcttcttgtctctagcctagtctacttctcac
attgtctgtcatctcttgagcaacatcaagtacactaatgattctttcct
catgttcagcccaaggtaacaactcacaagtttactcttgaagagttttt
catcactacttcagtgaccaaccctaccccagctgatgggaaggtgcttt
aatcccatatctacataggtagagaacagatatgcagtactttctgaccg
tttcacgtcaattttcccttcttcccattcacttctgtgcagcccagcag
ttgctgtgactttgtcatggcctccacccaccaaaatcatatcacatgtt
tcttgaagaacttttttcattattttgcatgtgttcactggcatggactt
atatgttggatcaactaatacaggtcaatccgcccaaccacactctgaag
aacaagtagctg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_45425944_45427055
seq2: B6Ng01-319D18.b_43_1154 (reverse)

seq1  CAGCTACTTGTTC-TCAGAGTGT-GTTGTGCGGATTTGACTGTATTAGTT  48
      ||||||||||||| ||||||||| |||| |||||||   ||||||||| |
seq2  CAGCTACTTGTTCTTCAGAGTGTGGTTGGGCGGATTGACCTGTATTAG-T  49

seq1  TGATTCCACATATAGTTCAATGCCAGTGAACACATTCCAAAATAATG-AA  97
      |||| | |||||||  || ||||||||||||||| | |||||||||| ||
seq2  TGATCCAACATATAAGTCCATGCCAGTGAACACA-TGCAAAATAATGAAA  98

seq1  AAAGTTC-TCAAGAACCATGTGATATGATTTTGGTGGGTGG-GGCCATGA  145
      ||||||| ||||||| ||||||||||||||||||||||||| ||||||||
seq2  AAAGTTCTTCAAGAAACATGTGATATGATTTTGGTGGGTGGAGGCCATGA  148

seq1  CAAAGTCACAGCAACTGCT-GGCTGCACAGAAGTGAATGGGAAGAAGGG-  193
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  CAAAGTCACAGCAACTGCTGGGCTGCACAGAAGTGAATGGGAAGAAGGGA  198

seq1  AAATTGACGTGAAACGGTCAGAAAGTACTGCATATCTGTTCTCTACCTAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACGTGAAACGGTCAGAAAGTACTGCATATCTGTTCTCTACCTAT  248

seq1  GTAGATATGGGATTAAAGCACCTT-CCATCAGCTGGGGTAGGGTTGGTCA  292
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTAGATATGGGATTAAAGCACCTTCCCATCAGCTGGGGTAGGGTTGGTCA  298

seq1  CTGAAGTAGTGATGAAAAACTCTTCAAGAGTAAACTTGTGAGTTGTTACC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTAGTGATGAAAAACTCTTCAAGAGTAAACTTGTGAGTTGTTACC  348

seq1  TTGGGCTGAACATGAGGAAAGAATCATTAGTGTACTTGATGTTGCTCAAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTGAACATGAGGAAAGAATCATTAGTGTACTTGATGTTGCTCAAG  398

seq1  AGATGACAGACAATGTGAGAAGTAGACTAGGCTAGAGACAAGAAGATAGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACAGACAATGTGAGAAGTAGACTAGGCTAGAGACAAGAAGATAGA  448

seq1  GCAATGAGATTATATAGTTTGAGGCATTTGAAACATACTAAATCTGTTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGATTATATAGTTTGAGGCATTTGAAACATACTAAATCTGTTTT  498

seq1  TACCTTTGTATTCCAGATTCAATTCTTATAACATATACCAATAAAAGATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTGTATTCCAGATTCAATTCTTATAACATATACCAATAAAAGATG  548

seq1  AACCAAGGTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGA  592
      |||||||||||      |||||||||||||||||||||||||||||||||
seq2  AACCAAGGTGA------TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGA  592

seq1  GAGAGAGAGAGAGAGAGACAGAGAGAGAGAGACAGAGAGAGAGAGACAGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGACAGAGAGAGAGAGACAGAGAGAGAGAGACAGA  642

seq1  GAGACAGAGACAGAGACAGAGACACAGAGAGAGATAGACAGAACTACTAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACAGAGACAGAGACACAGAGAGAGATAGACAGAACTACTAA  692

seq1  TGATTTGCTTCTCTGTGTTTTTACAGAAACATATTCATAACTCTTATATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGCTTCTCTGTGTTTTTACAGAAACATATTCATAACTCTTATATG  742

seq1  ACCAGTAAGTGTATTTTTTAATTTGTCATATATGATATCATGAAAAACAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAAGTGTATTTTTTAATTTGTCATATATGATATCATGAAAAACAC  792

seq1  ATTTTTAATTTTCAATGTGTCATCATGCTTATTTTCAGCCCTAGAGATAT  842
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTTTTAATTTTCAATGTGTCATCATGCTTATTTTCACCCCTAGAGATAT  842

seq1  TACAAATAGGACCTTTTCTCAGTTAATATTTGTATTGTGCTTTTATGACT  892
      ||||||||||||||||||||||||||||||||||||| | |||||||| |
seq2  TACAAATAGGACCTTTTCTCAGTTAATATTTGTATTGCGGTTTTATGAGT  892

seq1  CCATGCGAAGTGAAAAATACAGTTATCAAAAGTGCTAAGATTCTAAATTC  942
      |||||||||||||||||  |||||||| ||||| ||||||||||||||| 
seq2  CCATGCGAAGTGAAAAAGGCAGTTATCTAAAGTCCTAAGATTCTAAATTT  942

seq1  TATAACTCTTTGTTTCATTTTGTACCATTTTTCTGCTTTTTTTTTTTCGT  992
      || |||| ||||| |||||||||||||||||||||||||||||| || ||
seq2  TACAACTGTTTGTCTCATTTTGTACCATTTTTCTGCTTTTTTTTCTTGGT  992

seq1  TCTTGAAACCCCATGCTTACTCTCACTTAACCAATGGTTCATGTATGAAG  1042
      ||| |||||||| ||| |||||||||||||||||||||||||||||||||
seq2  TCTCGAAACCCCCTGCCTACTCTCACTTAACCAATGGTTCATGTATGAAG  1042

seq1  TTGTGCAAGTTGCCAAAGTCACAAAAATAAATATAGCATTCCATTTGGAG  1092
      |||  |||||||||||||||||||||||||| ||||||||||||  ||||
seq2  TTGATCAAGTTGCCAAAGTCACAAAAATAAACATAGCATTCCATACGGAG  1092

seq1  CATGCAGACATACAGAATTC  1112
      |||||||||| |||||||||
seq2  CATGCAGACAGACAGAATTC  1112