BAC Information

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BAC

Clone NameB6Ng01-319F19
Chromosome2 (Build37)
Map Location 117,105,658 - 117,191,641
singlet/doubletdoublet
Overlap geneRasgrp1
Upstream geneLOC433464, Tmco5, LOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik
Downstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319F19.bB6Ng01-319F19.g
ACCGA109011GA109012
length1,116570
definitionB6Ng01-319F19.b B6Ng01-319F19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,105,658 - 117,106,781)(117,191,068 - 117,191,641)
sequence
gaattccagtaaaaagtttaacaaaatgcctacatatgtataaagtgaag
aagcacacgactttgaagttatagggatccaatgtttttatgatataaat
atgagacacagaaaacataaaataggtataaaatatcttacagtttgtac
agttctttcgaagcttttacagtatacatctttagacaatttcacaagtg
gtcagtaaatgggtgagtcactccacagagaagaagagcagagacattgc
tgttcacagacaggatcagtccttgctttggcagacacccatctgcccag
acatttcaagacagcctggtaaacaaaacctcatgtgacaggccaaactt
tgttccagattgtatcaggagatcccacctgctcctaccattctgcagga
acagtaccaactcagacttcacacatcctttgtcttggctggaatgtaag
aatttgtgaggaaaactactgtctcccactatctttcctgtcctttctgc
tgtctgtaaggtcatctagctgtgataaatgactgaggccctctgaattc
ctatattacagattatttacacaaaatctcactgggagatctttattggg
gatgagaaataagaaaaaggcattgtctaaagaatcaagctctacacttg
tactagtgcataacagagtgaaaatacaaattttgaggtcttccattagt
cctatcactccataaaagtttccacataatatagacacctgccagaggcg
tagtaccaggtgctatgcttttcacgtttctgagatgggatgtagaagaa
ggataactgtgtgtaaagtagttcattaaagtttagagagacactcacca
caagccagctctttgtcactgaaatgctccaaagaggtgtgcaaacaggc
agtggtctttcatcaaaggaatatcttaaatgatttgagtcctttagggg
gcagcaccatgtacagttcatattcctctgtagactttatgctcttggtc
gtagggttgaacttttaacactttttctttgatttttccagaacagagtt
ctcagcatatccttgctgtctgaactcaatctgtagacaagctgcctcaa
ctcacagagaatcagc

aatagtaatgggtagtctggatttgaagcagagactggtgtttagtacgt
gttagcttagctatcttcctttttcgctttctttgctatgatcactttta
agccagaatggttggtaagctactcacttgatcatgagtgcagtaccagg
agcaattacatagtcattgacctggacctctatcacttggccctatcagt
caaggtcactcacaacccttgaagttttgcagacatgaagggctggctgg
tgcagaactctgtgaggtgagaatgaatgtggaaccagtcatgcctctgc
cactatgaaatatgtcatcctaaggcatttactcttaattaccataagga
ataaacagaattttgccttctgcccttcaccctctgaaggtttgctggga
caaactggcaaagatgaaacaagaagaaaggcatgcaaatctgttagcat
gcaaagtgtgtgtgtggggggggggcggggtagcattagaaaaaccacag
tagcaaaaaactcactggcccagtgctacttagaaagttttgtgcttact
ttttccaaaaagggcagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117105658_117106781
seq2: B6Ng01-319F19.b_47_1162

seq1  GAATTCCAGTAAAAAGTTTAACAAAATGCCTACATATGTATAAAGTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAAAAAGTTTAACAAAATGCCTACATATGTATAAAGTGAAG  50

seq1  AAGCACACGACTTTGAAGTTATAGGGATCCAATGTTTTTATGATATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACGACTTTGAAGTTATAGGGATCCAATGTTTTTATGATATAAAT  100

seq1  ATGAGACACAGAAAACATAAAATAGGTATAAAATATCTTACAGTTTGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACACAGAAAACATAAAATAGGTATAAAATATCTTACAGTTTGTAC  150

seq1  AGTTCTTTCGAAGCTTTTACAGTATACATCTTTAGACAATTTCACAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTCGAAGCTTTTACAGTATACATCTTTAGACAATTTCACAAGTG  200

seq1  GTCAGTAAATGGGTGAGTCACTCCACAGAGAAGAAGAGCAGAGACATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAAATGGGTGAGTCACTCCACAGAGAAGAAGAGCAGAGACATTGC  250

seq1  TGTTCACAGACAGGATCAGTCCTTGCTTTGGCAGACACCCATCTGCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACAGACAGGATCAGTCCTTGCTTTGGCAGACACCCATCTGCCCAG  300

seq1  ACATTTCAAGACAGCCTGGTAAACAAAACCTCATGTGACAGGCCAAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAAGACAGCCTGGTAAACAAAACCTCATGTGACAGGCCAAACTT  350

seq1  TGTTCCAGATTGTATCAGGAGATCCCACCTGCTCCTACCATTCTGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGATTGTATCAGGAGATCCCACCTGCTCCTACCATTCTGCAGGA  400

seq1  ACAGTACCAACTCAGACTTCACACATCCTTTGTCTTGGCTGGAATGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACCAACTCAGACTTCACACATCCTTTGTCTTGGCTGGAATGTAAG  450

seq1  AATTTGTGAGGAAAACTACTGTCTCCCACTATCTTTCCTGTCCTTTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGAGGAAAACTACTGTCTCCCACTATCTTTCCTGTCCTTTCTGC  500

seq1  TGTCTGTAAGGTCATCTAGCTGTGATAAATGACTGAGGCCCTCTGAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAAGGTCATCTAGCTGTGATAAATGACTGAGGCCCTCTGAATTC  550

seq1  CTATATTACAGATTATTTACACAAAATCTCACTGGGAGATCTTTATTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTACAGATTATTTACACAAAATCTCACTGGGAGATCTTTATTGGG  600

seq1  GATGAGAAATAAGAAAAAGGCATTGTCTAAAGAATCAAGCTCTACACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAAATAAGAAAAAGGCATTGTCTAAAGAATCAAGCTCTACACTTG  650

seq1  TACTAGTGCATAACAGAGTGAAAATACAAATTTTGAGGTCTTCCATTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTGCATAACAGAGTGAAAATACAAATTTTGAGGTCTTCCATTAGT  700

seq1  CCTATCACTCCATAAAAGTTTCCACATAATATAGACACCTGCCAGAGGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCACTCCATAAAAGTTTCCACATAATATAGACACCTGCCAGAGGCG  750

seq1  TAGTACCAGGTGCTATGCTTTTCACGTTTCTGAGATGGGATGTAGAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACCAGGTGCTATGCTTTTCACGTTTCTGAGATGGGATGTAGAAGAA  800

seq1  GGATAACTGTGTGTAAAGTAGTTCATTAAAGTTTAGAGAGACACTCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACTGTGTGTAAAGTAGTTCATTAAAGTTTAGAGAGACACTCACCA  850

seq1  CAAGCCAGCTCTTTGTCACTGAAATGCTCCAAAGAGGTGTGCAAACAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGCTCTTTGTCACTGAAATGCTCCAAAGAGGTGTGCAAACAGGC  900

seq1  AGTGGTCTTTCATCAAAGGAATATCTTAAATGATTTGAGTCCTTTAGGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTTTCATCAAAGGAATATCTTAAATGATTTGAGTCCTTTAGGGG  950

seq1  GCAGCACCATGTACAGTTCATATTCCTCTGTAGACTTTATGCTCTTGGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACCATGTACAGTTCATATTCCTCTGTAGACTTTATGCTCTTGGTC  1000

seq1  GTAGGGTTGAAACTTTTAAACACTTTTTCCTTTGATTTTTCCAG-ACAGA  1049
      ||||||||| ||||||| |||||||||| ||||||||||||||| |||||
seq2  GTAGGGTTG-AACTTTT-AACACTTTTT-CTTTGATTTTTCCAGAACAGA  1047

seq1  GTTTCTCAGCATATCCCTTGCTGTCCTGGAACTCATTCTGTAGACCAGGC  1099
      | |||||||||||| ||||||||||   ||||||| |||||||| || ||
seq2  G-TTCTCAGCATAT-CCTTGCTGTC--TGAACTCAATCTGTAGA-CAAGC  1092

seq1  TGGCCTCAAACTCACAGAG-ATCAGC  1124
      | ||||| ||||||||||| ||||||
seq2  T-GCCTC-AACTCACAGAGAATCAGC  1116


seq1: chr2_117191068_117191641
seq2: B6Ng01-319F19.g_68_643 (reverse)

seq1  TTTCTGCCCTTTTTGGAAAAAG-AAGCAC-AGACTTTCTAAGTAGCACTG  48
      |||||||||||||||||||||| |||||| | ||||||||||||||||||
seq2  TTTCTGCCCTTTTTGGAAAAAGTAAGCACAAAACTTTCTAAGTAGCACTG  50

seq1  GGCCAGTGAGTTATTTGCTACTGTGGTTTTTCTAATGCTACCCCGCCCCC  98
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTGAGTTTTTTGCTACTGTGGTTTTTCTAATGCTACCCCGCCCCC  100

seq1  CCCCCACACACACACTTTGCATGCTAACAGATTTGCATGCCTTTCTTCTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACACACACACTTTGCATGCTAACAGATTTGCATGCCTTTCTTCTT  150

seq1  GTTTCATCTTTGCCAGTTTGTCCCAGCAAACCTTCAGAGGGTGAAGGGCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATCTTTGCCAGTTTGTCCCAGCAAACCTTCAGAGGGTGAAGGGCA  200

seq1  GAAGGCAAAATTCTGTTTATTCCTTATGGTAATTAAGAGTAAATGCCTTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAAAATTCTGTTTATTCCTTATGGTAATTAAGAGTAAATGCCTTA  250

seq1  GGATGACATATTTCATAGTGGCAGAGGCATGACTGGTTCCACATTCATTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACATATTTCATAGTGGCAGAGGCATGACTGGTTCCACATTCATTC  300

seq1  TCACCTCACAGAGTTCTGCACCAGCCAGCCCTTCATGTCTGCAAAACTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCACAGAGTTCTGCACCAGCCAGCCCTTCATGTCTGCAAAACTTC  350

seq1  AAGGGTTGTGAGTGACCTTGACTGATAGGGCCAAGTGATAGAGGTCCAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTGTGAGTGACCTTGACTGATAGGGCCAAGTGATAGAGGTCCAGG  400

seq1  TCAATGACTATGTAATTGCTCCTGGTACTGCACTCATGATCAAGTGAGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGACTATGTAATTGCTCCTGGTACTGCACTCATGATCAAGTGAGTA  450

seq1  GCTTACCAACCATTCTGGCTTAAAAGTGATCATAGCAAAGAAAGCGAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCAACCATTCTGGCTTAAAAGTGATCATAGCAAAGAAAGCGAAAA  500

seq1  AGGAAGATAGCTAAGCTAACACGTACTAAACACCAGTCTCTGCTTCAAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATAGCTAAGCTAACACGTACTAAACACCAGTCTCTGCTTCAAAT  550

seq1  CCAGACTACCCATTACTATTGAATTC  574
      ||||||||||||||||||||||||||
seq2  CCAGACTACCCATTACTATTGAATTC  576


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