BAC Information

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BAC

Clone NameB6Ng01-320D24
Chromosome2 (Build37)
Map Location 61,527,747 - 61,528,944
singlet/doubletsinglet
Overlap genenone
Upstream geneRbms1, ENSMUSG00000075325, Tank
Downstream genePsmd14, Tbr1, LOC100039274, Slc4a10, Dpp4, Gcg, Fap, Ifih1, Gca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320D24.bB6Ng01-320D24.g
ACCGA109668GA109669
length1,1791,149
definitionB6Ng01-320D24.b B6Ng01-320D24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttaagaacacatgcatccccaatgtcactaatcactgtgatt
attgctagagcatatatagctaggaataagaaaatcaataaaccaggaat
aaattactactctttttgttttctgtgaaagactcataaaactggggatt
gaattaattaacctatataaacatgcctagtagggtgctagaaaggtagt
gtgcactcaaaactgttttatttaaatccacttacatcacactctgtaaa
atgaatttataatccaggtattttacttccaagctgtaatcctagattgg
gcaggtctggagttattctaactcattccctagccataatgtcacctgtt
acttgctgtttctcctggccatgtgctcatgaggtccatctcctctcatg
gtggcctcctccacctccatcttctttcttccctctaccttcaacccacc
tttctcctttcactgccctagtttctccctccaccgtccaatcacaggtt
ctaggtttttactgaccagttaaatttgagagcaaggtccacacagcatc
acttggtgtacatgaggatctgctcgtcctgggcaaccgaatcttgagag
ctagtatttagcatgagaatacaagcagcatcacacaaaaccactgcaca
ctcttgttcacatgaagattttggctctttgtgtcattatgttaaagttg
gggttgccgaagtttcattggtctaatgttgtcatgtagaaacaattcat
aactttttaaatgaagaaaaaaaaatgatgatacttctgtcatatgctag
attcctgtggtgttagggtttttggcaatgtcaacatgaatttgtgtaaa
tacttacctgttcatttaattccaactcactctgtcgtgtaaagcacagt
acaaactacaaacataatgaaaaattctagaatcttgtgatagtttcaat
atattacctttacaaatccaagctgcttcaacttctttcatgcttttgac
tgactagacaccagaagtagaaaaaaaactataacattgacatcaaagta
ttccatgtgtctgttcatatttcaatacatgacagaacagttagttgctc
tacttgctactacagtctttgggctatgtttttccaagggtctagattct
atcatgcatgatgatcattgaacaatctg
gaattctttgctttacttgtctataatgaatacttgttagagggacctaa
gaacttattaaagattataaggccagaatcattgatacaaaatctgggga
gggtttcctcagagtcagcacacagatgctgtgatctgtaggcagccaaa
gttttacctcaggctggcagccaaacttagtaatgtaagaatcacccaga
ggtgctgattttgaagacatgaaggcatcatggagagcaactatgtttgt
tgtagagctacagtccctaaaaagagactggaagaagccattagtcaggc
tacatcctcagttgcagtcaaagtcccaggactgaaagggtcatggaaag
aagttgaggcatggcatcatgtggcagagtcagagtctctgaagaaaacc
tgagagaggtgaaaacgcaacccagttgctgtgaagacacaacccagttg
ctgtgaagactagaacattttggaaatgccagtacaatgggacaaccacc
aatggcaatagcagctatgagtacagccagcctgagcctcagagacaaac
ttcttgaactttttgtgtcctagaagtctgacatgtagcttcacattttg
gggacttggttttgctctaatttgattgccaatgtgccctgtttcttcct
tgctggaataagaaaatatttaatgtattttaattgtacaagagcccaga
attgagagattttgagttttggagacttagagaaatttggatactttaga
gagactgtggatacttgagaaacttttaatatttcaaagaatcataagca
ttggattattaaagagactttggctatatttttcaaagattttatttatt
ggaagggtagcccaaagaggtcagaaggaggatatcaggattatctagaa
ctagagttataacatttcgaagttgccacatggatggtggggactgaacc
tgggtctctgcaagacaaaagtggttttaaccactaagccattctcagcc
tcaggacttatgtattatttttaaaggaataatttttagctatgtaattc
agactcagacttttataggtatactatgttattatgtatataatatggag
acttgggttgacaaaaggacgttactgtatgtataactgaaatatgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61527747_61528944
seq2: B6Ng01-320D24.b_45_1223

seq1  GAATTCCTTTAAGAACACATGCATCCCCAATGTCACTAATCACTGTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAAGAACACATGCATCCCCAATGTCACTAATCACTGTGATT  50

seq1  ATTGCTAGAGCATATATAGCTAGGAATAAGAAAATCAATAAACCAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAGAGCATATATAGCTAGGAATAAGAAAATCAATAAACCAGGAAT  100

seq1  AAATTACTACTCTTTTTGTTTTCTGTGAAAGACTCATAAAACTGGGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTACTCTTTTTGTTTTCTGTGAAAGACTCATAAAACTGGGGATT  150

seq1  GAATTAATTAACCTATATAAACATGCCTAGTAGGGTGCTAGAAAGGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAATTAACCTATATAAACATGCCTAGTAGGGTGCTAGAAAGGTAGT  200

seq1  GTGCACTCAAAACTGTTTTATTTAAATCCACTTACATCACACTCTGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTCAAAACTGTTTTATTTAAATCCACTTACATCACACTCTGTAAA  250

seq1  ATGAATTTATAATCCAGGTATTTTACTTCCAAGCTGTAATCCTAGATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTATAATCCAGGTATTTTACTTCCAAGCTGTAATCCTAGATTGG  300

seq1  GCAGGTCTGGAGTTATTCTAACTCATTCCCTAGCCATAATGTCACCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTGGAGTTATTCTAACTCATTCCCTAGCCATAATGTCACCTGTT  350

seq1  ACTTGCTGTTTCTCCTGGCCATGTGCTCATGAGGTCCATCTCCTCTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTGTTTCTCCTGGCCATGTGCTCATGAGGTCCATCTCCTCTCATG  400

seq1  GTGGCCTCCTCCACCTCCATCTTCTTTCTTCCCTCTACCTTCAACCCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTCCTCCACCTCCATCTTCTTTCTTCCCTCTACCTTCAACCCACC  450

seq1  TTTCTCCTTTCACTGCCCTAGTTTCTCCCTCCACCGTCCAATCACAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTTCACTGCCCTAGTTTCTCCCTCCACCGTCCAATCACAGGTT  500

seq1  CTAGGTTTTTACTGACCAGTTAAATTTGAGAGCAAGGTCCACACAGCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTTTTACTGACCAGTTAAATTTGAGAGCAAGGTCCACACAGCATC  550

seq1  ACTTGGTGTACATGAGGATCTGCTCGTCCTGGGCAACCGAATCTTGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTGTACATGAGGATCTGCTCGTCCTGGGCAACCGAATCTTGAGAG  600

seq1  CTAGTATTTAGCATGAGAATACAAGCAGCATCACACAAAACCACTGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATTTAGCATGAGAATACAAGCAGCATCACACAAAACCACTGCACA  650

seq1  CTCTTGTTCACATGAAGATTTTGGCTCTTTGTGTCATTATGTTAAAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTCACATGAAGATTTTGGCTCTTTGTGTCATTATGTTAAAGTTG  700

seq1  GGGTTGCCGAAGTTTCATTGGTCTAATGTTGTCATGTAGAAACAATTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCCGAAGTTTCATTGGTCTAATGTTGTCATGTAGAAACAATTCAT  750

seq1  AACTTTTTAAATGAAGAAAAAAAAATGATGATACTTCTGTCATATGCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTAAATGAAGAAAAAAAAATGATGATACTTCTGTCATATGCTAG  800

seq1  ATTCCTGTGGTGTTAGGGTTTTTGGCAATGTCAACATGAATTTGTGTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTGGTGTTAGGGTTTTTGGCAATGTCAACATGAATTTGTGTAAA  850

seq1  TACTTACCTGTTCATTTAATTCCAACTCACTCTGTCGTGTAAAGCACAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCTGTTCATTTAATTCCAACTCACTCTGTCGTGTAAAGCACAGT  900

seq1  ACAAACTACAAACATAATGAAAAATTCTAGAATCTTGTGATAGTTTCAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTACAAACATAATGAAAAATTCTAGAATCTTGTGATAGTTTCAAT  950

seq1  ATATTACCTTTACAAATCCAAGCTGCTTCAACTTCTTTCATGCCTTTTGA  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATATTACCTTTACAAATCCAAGCTGCTTCAACTTCTTTCATG-CTTTTGA  999

seq1  CTGACTAGACACCAAGAAGTAGAAAAAAAACTATAAACATTGACATCCAA  1050
      ||||||||||||| |||||||||||||||||||| ||||||||||| |||
seq2  CTGACTAGACACC-AGAAGTAGAAAAAAAACTAT-AACATTGACAT-CAA  1046

seq1  AGTATCCCATGTGTCTGTTTCATAATTTCATACATGACAGAAACAAGTAA  1100
      ||||| ||||||||||| |||||| ||  |||||||||||||   |||  
seq2  AGTATTCCATGTGTCTG-TTCATATTTCAATACATGACAGAA--CAGT-T  1092

seq1  AGTTGCCTTCTACTTGCTACTACAGTCTTTGGGGCTATG-TTTTCAAAGG  1149
      ||||||  |||||||||||||||||||||| |||||||| ||||| ||||
seq2  AGTTGC--TCTACTTGCTACTACAGTCTTT-GGGCTATGTTTTTCCAAGG  1139

seq1  TTCTTAAAGATTTCTAAATCTATGGTATGATGATCATTAAAACAATCTG  1198
       |||   ||| ||||  ||| || | ||||||||||||  |||||||||
seq2  GTCT---AGA-TTCT--ATC-AT-GCATGATGATCATT-GAACAATCTG  1179