BAC Information

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BAC

Clone NameB6Ng01-321I23
Chromosome2 (Build37)
Map Location 100,025,649 - 100,026,851
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386, LOC668702
Downstream geneLOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321I23.bB6Ng01-321I23.g
ACCGA110630GA110631
length1,1921,157
definitionB6Ng01-321I23.b B6Ng01-321I23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaagagctagaaagggtgagtttattcagcagtaagccttta
gtacaacaactacatcaggtgaattaaggatacatttgcaacatttagaa
tcttaaatgtgtttgattccactataatcatgaatatttgcaaacacttt
gtaggttactccatgtaacacatatttttaatttacttctcataattctt
tgagatgagaattattgcttaaagtttatccatgttacaagagtacagag
aacatgagaatgtcctcccggtgtagtgagttattcatttgatataagaa
attaaatgagttataatttgagataattaagacattaactcagtttactt
actggtacatttacctctcgcacatatagtttagtctttatgctataagt
aaggacaaaactactacatctattacttgcttacatataaataattaaat
atttgtagagcataattaaatggttcaataagtttattcataaaatacat
ggccatttcaaggccagtgagaaatatatttgaatgttaaagctgggatt
ggcttaccagagagaacagcactttgaaatgaacattgaaaaggtggaaa
acttagatgagcatgggcatgattcctctacctaccatctcagaacatgg
gaggcagtggtagaatgattgtcaacatgtccaattcaaccacagccaca
tataaagattctatgtcaataggaaagcaaataagaaaaacacaactgta
ggtcacttatatagttagaattgggtaaaatattaatgtagaggaaaaat
atgtgcaaaggcctttcagtcacttgtaggttttattaatgcttttacat
tcttctgtgaaacataagaatactatgctgtacctttacttttactaagt
taccatagcttttgacactttatctataacatatcatttatttaaaactt
aactacatgtaaaaacagtttagatatattcaaatttcataatttttccc
atatgtatatttgtttccttgtaggaaagaacactgattatttttttcag
ttattatcaaataaagtagaaggtttgaaattagcattcaattacaatgt
gctgatttttcttttcaatttttcgtcttttcttcagaaattggacctat
acgtgcaccattcaattcttaattttgattcctgaacatgag

gaattctcacctgaggaataccaaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcaaggatgtggagaaaggggaacactcctccattgttggtg
ggatagcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactcccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaata
gaatactactcagctattaaaaaaatgaatttatgaaattcctagccaaa
tggatggacctggagggtatcatcctgagtgatgtacccaatcaaaaagg
aactcgcacaatatgtactcactgataagtggatattaggccagaaactt
aggatacccaagatataagatacaacttgccaaacgcatgaaattcaaga
agaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatggtaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgattgccatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctcttcttgttagactatgctggggcctagcaaacac
agaagtggatgatcacagtcagctattggataggtcacatagcccccatg
gaggagctagagaaattacctaagagctaaaggtaactgcaaccctatag
tgacacattgactaaccagtagcccctgagctcttgtctctagctgcata
tgtatcatagatgcctagttcgcatcactgccaaagaaagccattgactg
acacttaatgccagtacaggacgccagctaaattggaatgtgtggtggct
gagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100025649_100026851
seq2: B6Ng01-321I23.b_47_1238 (reverse)

seq1  CTCATGTT-AAGAAT-AAAAATAAGAATATAGATGGTGCACAGTATATAA  48
      |||||||| | |||| |||| ||||||| |  ||||||||| ||||   |
seq2  CTCATGTTCAGGAATCAAAATTAAGAAT-TGAATGGTGCAC-GTAT---A  45

seq1  GGTC--ATATCTGGAGAAAGAACAGAAAAAATTTGAAAAAGAAAATTCAG  96
      ||||  || |||| |||||  || ||||||  ||| ||||||||| ||||
seq2  GGTCCAATTTCTGAAGAAAAGAC-GAAAAA--TTG-AAAAGAAAAATCAG  91

seq1  CAACAATTTGTAATTGAATTGCTTAATTTCAAACCCTTCTACTTTATTTG  146
      | |||  ||||||||||| ||| |||||||||| ||||||||||||||||
seq2  C-ACA--TTGTAATTGAA-TGC-TAATTTCAAA-CCTTCTACTTTATTTG  135

seq1  AT-ATAACTTGAAAAAATAATCAGTTGTTCTTTCCTACAAGG-AACAAAT  194
      || ||||||  ||||||||||||| ||||||||||||||||| |||||||
seq2  ATAATAACTGAAAAAAATAATCAG-TGTTCTTTCCTACAAGGAAACAAAT  184

seq1  ATACATTATGGGAAAAATTATGAAATTTGAATATATCTTAACTGTTTTTA  244
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  ATACA-TATGGGAAAAATTATGAAATTTGAATATATCTAAACTGTTTTTA  233

seq1  CATGTAGTTAAGTTTTAAATAAATGATATGTTATAGATAAAGTGTCAAAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGTTAAGTTTTAAATAAATGATATGTTATAGATAAAGTGTCAAAA  283

seq1  GCTATGGTAACTTAGTAAAAGTAAAGGTACAGCATAGTATTCTTATGTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGTAACTTAGTAAAAGTAAAGGTACAGCATAGTATTCTTATGTTT  333

seq1  CACAGAAGAATGTAAAAGCATTAATAAAACCTACAAGTGACTGAAAGGCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGAATGTAAAAGCATTAATAAAACCTACAAGTGACTGAAAGGCC  383

seq1  TTTGCACATATTTTTCCTCTACATTAATATTTTACCCAATTCTAACTATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACATATTTTTCCTCTACATTAATATTTTACCCAATTCTAACTATA  433

seq1  TAAGTGACCTACAGTTGTGTTTTTCTTATTTGCTTTCCTATTGACATAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGACCTACAGTTGTGTTTTTCTTATTTGCTTTCCTATTGACATAGA  483

seq1  ATCTTTATATGTGGCTGTGGTTGAATTGGACATGTTGACAATCATTCTAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATATGTGGCTGTGGTTGAATTGGACATGTTGACAATCATTCTAC  533

seq1  CACTGCCTCCCATGTTCTGAGATGGTAGGTAGAGGAATCATGCCCATGCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTCCCATGTTCTGAGATGGTAGGTAGAGGAATCATGCCCATGCT  583

seq1  CATCTAAGTTTTCCACCTTTTCAATGTTCATTTCAAAGTGCTGTTCTCTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGTTTTCCACCTTTTCAATGTTCATTTCAAAGTGCTGTTCTCTC  633

seq1  TGGTAAGCCAATCCCAGCTTTAACATTCAAATATATTTCTCACTGGCCTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGCCAATCCCAGCTTTAACATTCAAATATATTTCTCACTGGCCTT  683

seq1  GAAATGGCCATGTATTTTATGAATAAACTTATTGAACCATTTAATTATGC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGCCATGTATTTTATGAATAAACTTATTGAACCATTTAATTATGC  733

seq1  TCTACAAATATTTAATTATTTATATGTAAGCAAGTAATAGATGTAGTAGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAATATTTAATTATTTATATGTAAGCAAGTAATAGATGTAGTAGT  783

seq1  TTTGTCCTTACTTATAGCATAAAGACTAAACTATATGTGCGAGAGGTAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTTACTTATAGCATAAAGACTAAACTATATGTGCGAGAGGTAAA  833

seq1  TGTACCAGTAAGTAAACTGAGTTAATGTCTTAATTATCTCAAATTATAAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGTAAGTAAACTGAGTTAATGTCTTAATTATCTCAAATTATAAC  883

seq1  TCATTTAATTTCTTATATCAAATGAATAACTCACTACACCGGGAGGACAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAATTTCTTATATCAAATGAATAACTCACTACACCGGGAGGACAT  933

seq1  TCTCATGTTCTCTGTACTCTTGTAACATGGATAAACTTTAAGCAATAATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTTCTCTGTACTCTTGTAACATGGATAAACTTTAAGCAATAATT  983

seq1  CTCATCTCAAAGAATTATGAGAAGTAAATTAAAAATATGTGTTACATGGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTCAAAGAATTATGAGAAGTAAATTAAAAATATGTGTTACATGGA  1033

seq1  GTAACCTACAAAGTGTTTGCAAATATTCATGATTATAGTGGAATCAAACA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCTACAAAGTGTTTGCAAATATTCATGATTATAGTGGAATCAAACA  1083

seq1  CATTTAAGATTCTAAATGTTGCAAATGTATCCTTAATTCACCTGATGTAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGATTCTAAATGTTGCAAATGTATCCTTAATTCACCTGATGTAG  1133

seq1  TTGTTGTACTAAAGGCTTACTGCTGAATAAACTCACCCTTTCTAGCTCTT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTACTAAAGGCTTACTGCTGAATAAACTCACCCTTTCTAGCTCTT  1183

seq1  TCTGAATTC  1203
      |||||||||
seq2  TCTGAATTC  1192


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