BAC Information

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BAC

Clone NameB6Ng01-321P14
Chromosome2 (Build37)
Map Location 86,519,591 - 86,520,802
singlet/doubletsinglet
Overlap genenone
Upstream geneGA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086
Downstream geneOlfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321P14.bB6Ng01-321P14.g
ACCGA110940GA110941
length1,1981,220
definitionB6Ng01-321P14.b B6Ng01-321P14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggtatcagtatttgtgaatgatatgataatatacaaaagcaa
ccccaaaatatctaccacagaacttccactgataataaacaatttcagta
atgtggctagatataaaattaactcaaacaaatcagtagcctttgtttat
ataaatgataaatgggttaagaaagaaattaggggtgtactgtgcctgct
agaggagaatcgtcctccagggagggctctgacaccaggtctcaggcaag
agcaccatcttgtaccctgggtctctcagacaccagtccacacaggagag
cacacaggttacagaagcaaaagagcttcttggacaacgtccttttgggc
cttcatcatcagccaggaggcagagctgatcatcccacatctgtgtacct
tccccgcctgagaagagcttccctgcagagagtgctctgacctatgggac
tcaggagagagttggactccaaggagtgctgacagaggctaacaaaatca
cagaatagctccaaactttgtctctgtaactcctttcatgggtattttgt
taccaatccaaggaggaatgaagtatccacccattggtcttccctcttct
tgattttcttgtgttttgcaaattgtaacttgggtgttttctgtttctag
gctaatatccacttatcagtgagtgcatatctaatgacttctttaggagc
tgatggtttctgcaaccctataggtggaacaatatgaactaaccagtagc
tctagagctcctatctctagctgcataaattgcagaagatggcctagttg
gccatcactgggaagagaggccccttggaattgcaaactttatatgcctc
aatacaggggaatgccagggccaagaagcatgagtgggtgggttggggag
caaggcagagggaactttagggatagcatttggaaatgtatataagaaaa
tatctaataaaaaataaatgaatctaaaaaaaaacacagaataatcaagc
tccagcccagagctagacatgtaccaccaaagattaccagaatggcctac
gcaaacatagatattactaacagaatcagaccactctgcatcatcagtac
catgtacctgccaccacggtgagttccttggatatcactcactggtaaaa
agcctaatccgatttcaaatcaattcctccatgcgagtccttggttga
gaattccatgtgccctaagcaaataattaaataatatattagtaagaggg
caatatttagaatccatttttaacattaagggtagtgttgaatttcatca
ttcccagagacgtaacttagtgcagagactctatcactgtgtatatgctt
tcaagtttgttatgtaaacactgaagccagttatacttgctctttgtaaa
attggattcccaagtgcttgccccaaggaatttaagcaaatcctctttct
tactatgaatattttcaaatagttaagcctggaaattttaaataaaataa
gtagttatttcatttgattactggattgcatagttatgatgcacattttt
aattttattgttttctcaattgcataaaaatgagtaaacactctacaaca
aacacccatttttggtatgcacactttgtttcaatattttatttcttttt
ttttcatttatgttaagaaacctggcttgttattcatagagacatgttaa
aatatttttttcttaagagaacagaaaatgggtaaaagctacaatagcta
gtataaaataactttgttgtatttcatatgttaggttctacatcaaccat
ttctctaattgtctgaaattgttcttacctaaagaagagcaaatgaaggt
ttgagcttgctgtaaaactcagtattttaaattgtttatatctgcttatt
caactgtgatgaaacccaaaggaggcaaacctgggggaataggatctaat
tatgccaaatttagtatggccctggtggggacagaatgacacggttccta
cccctgggacaaggtccccatgtgagcctccatgagtgtcaaaggctgct
gtgggcatgagacttgttcgtgtaatatatatatgtatacacacacacac
acacacacacacacacacatattatgtatttttctttatatacatttcaa
atgttatcctgaaagttccctataccctccctctgccttgctccccctac
ccacccattcccaacatctagccctggcattcccctgtactgggggcata
tataaagtttgcaataccaagaggcctctccttcccagtggatggccaac
taggcattctttctgctataattatacagcctagaagaacatgaagctct
gggggtactctggtagtcatattgttatcacagtaagtgcaatcccatcc
agcactttgggtgctctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86519591_86520802
seq2: B6Ng01-321P14.g_68_1287

seq1  GAATTCCATGTGCCCTAAGCAAATAATTAAATAATATATTAGTAAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTGCCCTAAGCAAATAATTAAATAATATATTAGTAAGAGGG  50

seq1  CAATATTTAGAATCCATTTTTAACATTAAGGGTAGTGTTGAATTTCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTAGAATCCATTTTTAACATTAAGGGTAGTGTTGAATTTCATCA  100

seq1  TTCCCAGAGACGTAACTTAGTGCAGAGACTCTATCACTGTGTATATGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGAGACGTAACTTAGTGCAGAGACTCTATCACTGTGTATATGCTT  150

seq1  TCAAGTTTGTTATGTAAACACTGAAGCCAGTTATACTTGCTCTTTGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTTGTTATGTAAACACTGAAGCCAGTTATACTTGCTCTTTGTAAA  200

seq1  ATTGGATTCCCAAGTGCTTGCCCCAAGGAATTTAAGCAAATCCTCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTCCCAAGTGCTTGCCCCAAGGAATTTAAGCAAATCCTCTTTCT  250

seq1  TACTATGAATATTTTCAAATAGTTAAGCCTGGAAATTTTAAATAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGAATATTTTCAAATAGTTAAGCCTGGAAATTTTAAATAAAATAA  300

seq1  GTAGTTATTTCATTTGATTACTGGATTGCATAGTTATGATGCACATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTATTTCATTTGATTACTGGATTGCATAGTTATGATGCACATTTTT  350

seq1  AATTTTATTGTTTTCTCAATTGCATAAAAATGAGTAAACACTCTACAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTGTTTTCTCAATTGCATAAAAATGAGTAAACACTCTACAACA  400

seq1  AACACCCATTTTTGGTATGCACACTTTGTTTCAATATTTTATTTCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCATTTTTGGTATGCACACTTTGTTTCAATATTTTATTTCTTTTT  450

seq1  TTTTCATTTATGTTAAGAAACCTGGCTTGTTATTCATAGAGACATGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTATGTTAAGAAACCTGGCTTGTTATTCATAGAGACATGTTAA  500

seq1  AATATTTTTTTCTTAAGAGAACAGAAAATGGGTAAAAGCTACAATAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTTTCTTAAGAGAACAGAAAATGGGTAAAAGCTACAATAGCTA  550

seq1  GTATAAAATAACTTTGTTGTATTTCATATGTTAGGTTCTACATCAACCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAATAACTTTGTTGTATTTCATATGTTAGGTTCTACATCAACCAT  600

seq1  TTCTCTAATTGTCTGAAATTGTTCTTACCTAAAGAAGAGCAAATGAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAATTGTCTGAAATTGTTCTTACCTAAAGAAGAGCAAATGAAGGT  650

seq1  TTGAGCTTGCTGTAAAACTCAGTATTTTAAATTGTTTATATCTGCTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTTGCTGTAAAACTCAGTATTTTAAATTGTTTATATCTGCTTATT  700

seq1  CAACTGTGATGAAACCCAAAGGAGGCAAACCTGGGGGAATAGGATCTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTGATGAAACCCAAAGGAGGCAAACCTGGGGGAATAGGATCTAAT  750

seq1  TATGCCAAATTTAGTATGGCCCTGGTGGGGACAGAATGACACGGTTCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCAAATTTAGTATGGCCCTGGTGGGGACAGAATGACACGGTTCCTA  800

seq1  CCCCTGGGACAAGGTCCCCATGTGAGCCTCCATGAGTGTCAAAGGCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGGACAAGGTCCCCATGTGAGCCTCCATGAGTGTCAAAGGCTGCT  850

seq1  GTGGGCATGAGACTTGTTCGTGTAATATATATATGTATACACACACACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCATGAGACTTGTTCGTGTAATATATATATGTATACACACACACAC  900

seq1  ACACACACACACACACACATA-TATGTA-TTTTCTTTATATACATTTCAA  948
      ||||||||||||||||||||| |||||| |||||||||||||||||||||
seq2  ACACACACACACACACACATATTATGTATTTTTCTTTATATACATTTCAA  950

seq1  ATGTTATCCTGAAAGTTCCCTATACCCTCCCTCTGCCTTGCT-CCCCTAC  997
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGTTATCCTGAAAGTTCCCTATACCCTCCCTCTGCCTTGCTCCCCCTAC  1000

seq1  CCACCCATTCCC-ACATCTAGGCCCTGGCATTCCCCTGTACTGGGG---C  1043
      |||||||||||| ||||||| |||||||||||||||||||||||||    
seq2  CCACCCATTCCCAACATCTA-GCCCTGGCATTCCCCTGTACTGGGGGCAT  1049

seq1  ATATAAAGTTTGCAATACCAAGAGGCCTCT-CTTCCCAGT-GATGGCCAA  1091
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  ATATAAAGTTTGCAATACCAAGAGGCCTCTCCTTCCCAGTGGATGGCCAA  1099

seq1  CTAGGCCATC-TTCTGCTATA--TATACAG-CTAGA--GACATG-AGCTC  1134
      ||||||  || ||||||||||  ||||||| |||||   ||||| |||||
seq2  CTAGGCATTCTTTCTGCTATAATTATACAGCCTAGAAGAACATGAAGCTC  1149

seq1  TGGGGGTACT-GGTTAGTTCATATTGTTGTTCCACTTATAGGGTTGCATA  1183
      ||||||||||  | ||| |||||||||| |  || | |      ||||  
seq2  TGGGGGTACTCTGGTAG-TCATATTGTTATCACAGTAA-----GTGCAAT  1193

seq1  CCCATTCAGCACTTTGGGTGCTTTCTCTA  1212
      ||||| |||||||||||||||  ||||||
seq2  CCCATCCAGCACTTTGGGTGC--TCTCTA  1220