BAC Information

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BAC

Clone NameB6Ng01-322F21
Chromosome2 (Build37)
Map Location 19,901,424 - 19,902,434
singlet/doubletsinglet
Overlap genenone
Upstream genePip5k2a, 4930426L09Rik, LOC667521, Armc3, Msrb2, LOC100041196, Ptf1a, LOC100041534, 4921504E06Rik, LOC100041244, Otud1, LOC667564, LOC100041302
Downstream geneLOC433406, LOC654360, LOC667609, Etl4, Arhgap21, LOC433408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322F21.bB6Ng01-322F21.g
ACCGA111225GA111226
length1,2211,020
definitionB6Ng01-322F21.b B6Ng01-322F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtcggctgaaaactaacatatcatatctctggcttgtggtt
agtaaatgccaaaaactcactcacaaatacccccaaaagtaccaggatga
agtgccttcccctggggagaccatcatacttcaggaagactcttgcacag
gtacatacactgtggctaagacaacaaggttgttccagcaaccaagcagc
aatggaaaaaagtccagaaatggaaatttacctgaatggataggtaaatt
ttaaactacataatggaaggatttacaacagcagaaaataactagcaata
gctacatatattagcatggtatattccatgacaaaatattgactcaatca
aaatagagttgtacacagctcccactaaggacaaagatctgacataggct
ttaaaagggattaatccaaggacatgatgctacagaaaatattgacaaac
aaatctctcatggttctatctgtacaaagtatagtatctgtatagaataa
taacatttataagaatacaaaatagaagggtggttgcctggtgctagaga
gagagagatcaggaggtactgtttaatggatatgacaacactttataaga
aggaaaagtgttggattaggatgatacaacactgcacatgtttgattcta
aacattaagaaagttgttgagatgggaattatgtcatacgagcattttgc
tacacttgagcatatttcaaattaaaaatgataggagaatccacatatat
aattaggtattgtaatggctattcctggttgtcaacttgactgtatatgg
aatgaactgcaatccagaattggtgggctcatctgtgatccagatcttta
ggctagaagacacaagtttctgacctggatcttggcatggagatcttgag
gcatagtggccataaaaagcttaggcccaaacaaggtactacatgcctct
aatccaagagattaatgcaagcagatctctgagttcaaggtcagcctggt
caaagcagtccatatccaggtgtacacatcttttctttattggggccaca
ctttctgctggagaacctacattaggaactttggaggagcagttccgttc
ttcctctggtttcacactactttgcatctgtggaactactttctacacga
tgaccagctggaacaacttagtctcttggtactggagagacacactactc
aatatcctggtgcgtaactac
gaattctcttgtgtattgtgttcatcaattctaaactcactggcttcatc
tacagaattctttgacacttatctcaacctttacctcctctgctcaacaa
tagcttgcagactgtacctggcttgaaatacactcattgaatcagtgaat
acataaatcagggcttgacagagggtgtgactgattaactcagttacaaa
tataggcatgtttctttagctgcatcttatcggaatgtggctgcttattt
tattttgtgttatcattgatgaggtcaaatgctttcttagcctgaagaaa
tgcaaagttcatcagcagatatgtgcctggccctttctcctcaagctatg
ctggccatgcactgttctccacaatactgggcatgtgatcctatgcacta
gaacatatgtatggtttgggaagtttattcagtcacacaaaatgataatg
cagaacaatgtgaattatacatgctgaagaatttggaaatgtatgctgaa
aactcatcctctaaggtttgaattccccaatcatgaggcatgaaaccaat
acagtagctcttgtgcatttaacttgaaagaagtgattacatccatggcc
ccatgagcttccacttggaatggaaaatacttgaattttatcctgtttta
ttatgagtgaagggcttaaattgtgatggcagcaagtgattttgaaagtc
aaaaaaatgtcttcgggttcagcagatcttattacagaaacctgtgaaga
tataaatttatcctgctggtgtttataactatattgagtcatccccagag
gtttcttgttaggttgcttgactttaaagatatctctgactaattatgag
taatggaacctcgaaaagagaatgttcaggattgaattttcagaatactg
agatggggagacacaatcagacatttttttttttttaccatcttgttggg
ttaaaatattttggagaaagtattcttatagtccttgtatcttaaccagt
tttatattttgtttttgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_19901424_19902434
seq2: B6Ng01-322F21.g_70_1089

seq1  GAATTCTCTTGTGTATTGTGTTCATCAATTCTAAACTCACTGGCTTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGTGTATTGTGTTCATCAATTCTAAACTCACTGGCTTCATC  50

seq1  TACAGAATTCTTTGACACTTATCTCAACCTTTACCTCCTCTGCTCAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATTCTTTGACACTTATCTCAACCTTTACCTCCTCTGCTCAACAA  100

seq1  TAGCTTGCAGACTGTACCTGGCTTGAAATACACTCATTGAATCAGTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGCAGACTGTACCTGGCTTGAAATACACTCATTGAATCAGTGAAT  150

seq1  ACATAAATCAGGGCTTGACAGAGGGTGTGACTGATTAACTCAGTTACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATCAGGGCTTGACAGAGGGTGTGACTGATTAACTCAGTTACAAA  200

seq1  TATAGGCATGTTTCTTTAGCTGCATCTTATCGGAATGTGGCTGCTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCATGTTTCTTTAGCTGCATCTTATCGGAATGTGGCTGCTTATTT  250

seq1  TATTTTGTGTTATCATTGATGAGGTCAAATGCTTTCTTAGCCTGAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTGTTATCATTGATGAGGTCAAATGCTTTCTTAGCCTGAAGAAA  300

seq1  TGCAAAGTTCATCAGCAGATATGTGCCTGGCCCTTTCTCCTCAAGCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTTCATCAGCAGATATGTGCCTGGCCCTTTCTCCTCAAGCTATG  350

seq1  CTGGCCATGCACTGTTCTCCACAATACTGGGCATGTGATCCTATGCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCATGCACTGTTCTCCACAATACTGGGCATGTGATCCTATGCACTA  400

seq1  GAACATATGTATGGTTTGGGAAGTTTATTCAGTCACACAAAATGATAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATGTATGGTTTGGGAAGTTTATTCAGTCACACAAAATGATAATG  450

seq1  CAGAACAATGTGAATTATACATGCTGAAGAATTTGGAAATGTATGCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAATGTGAATTATACATGCTGAAGAATTTGGAAATGTATGCTGAA  500

seq1  AACTCATCCTCTAAGGTTTGAATTCCCCAATCATGAGGCATGAAACCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCCTCTAAGGTTTGAATTCCCCAATCATGAGGCATGAAACCAAT  550

seq1  ACAGTAGCTCTTGTGCATTTAACTTGAAAGAAGTGATTACATCCATGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGCTCTTGTGCATTTAACTTGAAAGAAGTGATTACATCCATGGCC  600

seq1  CCATGAGCTTCCACTTGGAATGGAAAATACTTGAATTTTATCCTGTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGCTTCCACTTGGAATGGAAAATACTTGAATTTTATCCTGTTTTA  650

seq1  TTATGAGTGAAGGGCTTAAATTGTGATGGCAGCAAGTGATTTTGAAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGTGAAGGGCTTAAATTGTGATGGCAGCAAGTGATTTTGAAAGTC  700

seq1  AAAAAAATGTCTTCGGGTTCAGCAGATCTTATTACAGAAACCTGTGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGTCTTCGGGTTCAGCAGATCTTATTACAGAAACCTGTGAAGA  750

seq1  TATAAATTTATCCTGCTGGTGTTTATAACTATATTGAGTCATCCCCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTTATCCTGCTGGTGTTTATAACTATATTGAGTCATCCCCAGAG  800

seq1  GTTTCTTGTTAGGTTGCTTGAC-TTAAAGATATCTCTGACTAATTATGAG  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTTTCTTGTTAGGTTGCTTGACTTTAAAGATATCTCTGACTAATTATGAG  850

seq1  TAATGGAACCTCGAAAAGAGAATGTTCAGGATTGAATTTTCAGAATACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAACCTCGAAAAGAGAATGTTCAGGATTGAATTTTCAGAATACTG  900

seq1  AGATGGGGAGACACAATCAGACA--TTTTTTTTTTTACCATC-TGTTGGT  946
      |||||||||||||||||||||||  ||||||||||||||||| |||||| 
seq2  AGATGGGGAGACACAATCAGACATTTTTTTTTTTTTACCATCTTGTTGGG  950

seq1  TTAAAATATTTTGGAGAAAGTTATTCTTATAGTCCTTGTATCTTA--CAG  994
      |||||||||||||||||||| ||||||||||||||||||||||||  |||
seq2  TTAAAATATTTTGGAGAAAG-TATTCTTATAGTCCTTGTATCTTAACCAG  999

seq1  TT---TATTTTG-TTTTGCAG  1011
      ||   ||||||| ||||||||
seq2  TTTTATATTTTGTTTTTGCAG  1020