BAC Information

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BAC

Clone NameB6Ng01-323C20
Chromosome2 (Build37)
Map Location 96,949,087 - 96,950,167
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043267, Lrrc4c, LOC621146, LOC664974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323C20.bB6Ng01-323C20.g
ACCGA111825GA111826
length6341,072
definitionB6Ng01-323C20.b B6Ng01-323C20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgagaggcagtgtcagcccctaaccaatacagatgcagatact
cacagcctaccaagggactgagcctgtggattcccaatggaggagttagg
agaaggactgaaggagctgaagggaattgcatccctataggaagaatatc
aactaacccgataccccagagctccaagggactaaaccaccaaccaaaga
gtatacatggggggacccatggatacagctacatatgaagcagattattg
ccttatctggcatcagtgggaggggagccctttggtcctgtagaggcttg
atactccagcataagggggtgctagagtggtgagttgggaatggagaggt
aggtgggaaggaaatggggaaagaggatatgtgaaataaataaataaaat
aaaataaataaataaataaatttaaataaataaaataaccaatactataa
tatacttgcagttattctttgaaatgttcgcatctgagttctgagccatc
taacaccaccagtttcctcccatccaactcccatcattgtaacctctcca
tatcttaacttccaactttatttatcccttatttataatccacaaactct
taagagtttagttattgtgtgcggatgtgcatct

gaattcaagaactgtctccacactcttattaaaatcaactcttattattc
ttattttacatgttaaaatgaaataacacatttgctttattatttaataa
ggtgcacaatatgaattggtcaaatatttaagaataatattacgatttca
gttacttcttgtcagtttgtattattgctccagtagaacaatatttaccc
aagtcacaagtaaactataagtggaattttatatccactattaatgaaga
acatggtgttctgctttttaatataaatatataacttatataaatataat
tatctaaggatattgcctagtcttaactgaagatgcaattttgctgtatt
ttcttttatgtgtatatgaggatgtctgtatggggatgtctgcatgtgag
ttcaaatgcccactgaaatctgagttgttggacccagggagcctaagtaa
caggcaattctgagcagcctggcaagagtgctagaaaccaaactgagtag
gctcttaattaccaagttacctctcctacctccaggatattcaattaaaa
attgcaaattcttccaaggatcttcttaaatatcttttagagattttttt
tcagtgaaaactgaagagagtaacaactgaaatatttttctgaaatgctc
aattgcattgcctccttttatatttgtggtattgatgatgctactgttat
caaatcattactgtgcacctgacaatatgtaacctccagagcatatttca
gaaaatatattcacagacttttactaacattattagccatgcaggtggta
ccatgaccctttatttacaagaaaaatgtatgagtgcttaaaagatttat
ccttcagttttataataaaagaagttgagttaaatcttaatccatggtct
ttgaatggtttatttaatcctttaaaatataatacaattcatttacatgg
ctataaattgaccttttactggaaattacgtctaatttaaatcatttgtt
ttctatagaacttcataactttctaatgtcatgggctctagcagatctta
ttctcacatcacgttaaatggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96949087_96950167
seq2: B6Ng01-323C20.g_66_1137

seq1  GAATTCAAGAACTGTCTCCACACTCTTATTAAAATCAACTCTTATTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAACTGTCTCCACACTCTTATTAAAATCAACTCTTATTATTC  50

seq1  TTATTTTACATGTTAAAATGAAATAACACATTTGCTTTATTATTTAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTACATGTTAAAATGAAATAACACATTTGCTTTATTATTTAATAA  100

seq1  GGTGCACAATATGAATTGGTCAAATATTTAAGAATAATATTACGATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCACAATATGAATTGGTCAAATATTTAAGAATAATATTACGATTTCA  150

seq1  GTTACTTCTTGTCAGTTTGTATTATTGCTCCAGTAGAACAATATTTACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTCTTGTCAGTTTGTATTATTGCTCCAGTAGAACAATATTTACCC  200

seq1  AAGTCACAAGTAAACTATAAGTGGAATTTTATATCCACTATTAATGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACAAGTAAACTATAAGTGGAATTTTATATCCACTATTAATGAAGA  250

seq1  ACATGGTGTTCTGCTTTTTAATATAAATATATAACTTATATAAATATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGTTCTGCTTTTTAATATAAATATATAACTTATATAAATATAAT  300

seq1  TATCTAAGGATATTGCCTAGTCTTAACTGAAGATGCAATTTTGCTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGGATATTGCCTAGTCTTAACTGAAGATGCAATTTTGCTGTATT  350

seq1  TTCTTTTATGTGTATATGAGGATGTCTGTATGGGGATGTCTGCATGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTATGTGTATATGAGGATGTCTGTATGGGGATGTCTGCATGTGAG  400

seq1  TTCAAATGCCCACTGAAATCTGAGTTGTTGGACCCAGGGAGCCTAAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGCCCACTGAAATCTGAGTTGTTGGACCCAGGGAGCCTAAGTAA  450

seq1  CAGGCAATTCTGAGCAGCCTGGCAAGAGTGCTAGAAACCAAACTGAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAATTCTGAGCAGCCTGGCAAGAGTGCTAGAAACCAAACTGAGTAG  500

seq1  GCTCTTAATTACCAAGTTACCTCTCCTACCTCCAGGATATTCAATTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAATTACCAAGTTACCTCTCCTACCTCCAGGATATTCAATTAAAA  550

seq1  ATTGCAAATTCTTCCAAGGATCTTCTTAAATATCTTTTAGAGATTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAATTCTTCCAAGGATCTTCTTAAATATCTTTTAGAGATTTTTTT  600

seq1  TCAGTGAAAACTGAAGAGAGTAACAACTGAAATATTTTTCTGAAATGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAAAACTGAAGAGAGTAACAACTGAAATATTTTTCTGAAATGCTC  650

seq1  AATTGCATTGCCTCCTTTTATATTTGTGGTATTGATGATGCTACTGTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCATTGCCTCCTTTTATATTTGTGGTATTGATGATGCTACTGTTAT  700

seq1  CAAATCATTACTGTGCACCTGACAATATGTAACCTCCAGAGCATATTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCATTACTGTGCACCTGACAATATGTAACCTCCAGAGCATATTTCA  750

seq1  GAAAATATATTCACAGACTTTTACTAACATTATTAGCCATGCAGGTGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATATTCACAGACTTTTACTAACATTATTAGCCATGCAGGTGGTA  800

seq1  CCATGACCCTTTATTTACAAGAAAAATGTATGAGTGCTTAAAAGATTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACCCTTTATTTACAAGAAAAATGTATGAGTGCTTAAAAGATTTAT  850

seq1  CCTTCAGTTTTATAATAAAAGAAGTTGAGTTAAATCTTAATCCATGGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTTTTATAATAAAAGAAGTTGAGTTAAATCTTAATCCATGGTCT  900

seq1  TTGAATGGTTTATTTAATCCTTTAAAATATAATACAATTCATTTAACATG  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGAATGGTTTATTTAATCCTTTAAAATATAATACAATTCATTT-ACATG  949

seq1  GCTATAAAATTGACCTTTTACTGGAAATTACGGTCTAAATTTAAAATCAT  1000
      ||||| ||||||||||||||||||||||||| ||||||  || |||||||
seq2  GCTAT-AAATTGACCTTTTACTGGAAATTAC-GTCTAA--TTTAAATCAT  995

seq1  TTGTTTTCTATAGAACTTTCATAACTTTCTAATGTCATTGGGCTTCTTAG  1050
      |||||||||||||||| |||||||||||||||||||| ||||||   |||
seq2  TTGTTTTCTATAGAAC-TTCATAACTTTCTAATGTCA-TGGGCT--CTAG  1041

seq1  CAGATCTTATTCTCACATCAACGTAAATGGG  1081
      ||||||||||||||||||||   ||||||||
seq2  CAGATCTTATTCTCACATCACGTTAAATGGG  1072


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