BAC Information

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BAC

Clone NameB6Ng01-323I12
Chromosome2 (Build37)
Map Location 141,837,439 - 141,974,410
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323I12.bB6Ng01-323I12.g
ACCGA112083GA112084
length1,0031,099
definitionB6Ng01-323I12.b B6Ng01-323I12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,973,811 - 141,974,410)(141,837,439 - 141,838,541)
sequence
gaattctgcatggaaatggacttaggctgtttctctcacctaggctggct
gctgctcacaagaagatttacacatttcttctcatttaaataatcacaac
agtagttcagggtaagtgtagttgcactcttatgtagaggcaaaaccaca
aactttagtgctactttatcctgcctgaggcagatcttgccttgaatcat
gactcatacctatagtaattgcttacccttgaacaaattaactgctgtaa
agccttggattccttgtcattcaaataaatataacaatatagtgtgcata
agcagatataaaaaagtatgtatttcttagtagtcagaaatacattagtc
ttacaacaaattaataattgtgttattactaatttaattatattaatacc
ataccatttagatatgttaattagaattaatgctaaaataatgatattaa
tgtactaacattttaatagcacctaaaatagatgttatcaataatttggc
tctaaaaatattttcttactctgaaatattatttcccaagtatggatgac
agaataaattcctatttgttatttaatgctacatattactgcatttaatt
gtttaaagcagtaataattgctcttaaactctgtttctataggaatttgg
agtttggattaaatagtcttcactatgggttctgctgtagtattttcatt
attttcattagttcattagttacaggagcctaaaggtttgacaaagacta
gacagtgtttccagtgagatgttcatgtaagttacatgtagatgctggca
attggcagtttctcttcatatgtgacttcttccatacttggatgggtgtt
gtactagtataataggtgtttttgctctacagacacaagagaagctgaag
accttataggacctagccacaataatcaagatatttaccaccactgtgtt
ggcttacttggtttcatatggcagtaggcagtaccagactatgaatactt
aga

gaattccaggatagccagagctacatagtgagatcctgtatcattagttc
tgtcccagtgagagggatagccttccatttatctagcagcattctctgag
actgttctcaggttagcctgtatacaagtcatgagaatgaatccctctga
ttctgagtgcaataggaaaccatcagattgtaagttaagtaacacatgac
tggatgtgcattgaaagaaaatcctctatgtgtgtttggaactcagcaga
gagggatattacagggcggccaataagtaggtctctggagctgtgcaggc
aagggcagaaggaaggtctttctggtaaatggacactggatgatagatgg
caatcacactgtatccccgagaagccatgacaggctacttctgagttaag
aggaggaaaacgaaggaagaatccaggatgatcctcagaagtacaaatat
aggaacaaagtgtgctatgatagtaaaactaaatgaaatagtgatgaaag
taagcatattggtctgtatcaaatttaggacccctataggttagaaagag
cacatcctagtaaacagaggaatggaggttctgtcataggggtctgcatg
catgccgaggaacaagatgaaactggaaaagtatatttgaagagtgtgag
ataatacaaggaatgctttcttcttaataattgcttgtgagttttggaaa
attgaatgccacaaatataactctcagttaaatgcctcctatgtgagcag
aattctttatattgtccaattgtactatggaataatttatatcaaattaa
tcacccatgatttttgtcatctaagaactcgtgtttcgaaaatacaccat
gatgataggattaaccaaaattccatctcccttgcccttctctggaactt
tgtaataaccattcatactatcattatagtcagtagggacctctaattca
tggatttatttttctatcttgttcttatagaaatacttgaagtgtaattc
tgggtatcatctcctgtgtgatttattgaacagctcttatgtagaaatct
ctattttgacctcaaatatgacaatacagccttttgtgtagcatttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141973811_141974410
seq2: B6Ng01-323I12.b_49_648 (reverse)

seq1  AATTAAATGCAGTAATATGTAGCATTAAATAACAAATAGGAATTTATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATGCAGTAATATGTAGCATTAAATAACAAATAGGAATTTATTCT  50

seq1  GTCATCCATACTTGGGAAATAATATTTCAGAGTAAGAAAATATTTTTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCATACTTGGGAAATAATATTTCAGAGTAAGAAAATATTTTTAGA  100

seq1  GCCAAATTATTGATAACATCTATTTTAGGTGCTATTAAAATGTTAGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATTATTGATAACATCTATTTTAGGTGCTATTAAAATGTTAGTACA  150

seq1  TTAATATCATTATTTTAGCATTAATTCTAATTAACATATCTAAATGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCATTATTTTAGCATTAATTCTAATTAACATATCTAAATGGTAT  200

seq1  GGTATTAATATAATTAAATTAGTAATAACACAATTATTAATTTGTTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTAATATAATTAAATTAGTAATAACACAATTATTAATTTGTTGTAA  250

seq1  GACTAATGTATTTCTGACTACTAAGAAATACATACTTTTTTATATCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATGTATTTCTGACTACTAAGAAATACATACTTTTTTATATCTGCT  300

seq1  TATGCACACTATATTGTTATATTTATTTGAATGACAAGGAATCCAAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACTATATTGTTATATTTATTTGAATGACAAGGAATCCAAGGCT  350

seq1  TTACAGCAGTTAATTTGTTCAAGGGTAAGCAATTACTATAGGTATGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCAGTTAATTTGTTCAAGGGTAAGCAATTACTATAGGTATGAGTC  400

seq1  ATGATTCAAGGCAAGATCTGCCTCAGGCAGGATAAAGTAGCACTAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCAAGGCAAGATCTGCCTCAGGCAGGATAAAGTAGCACTAAAGTT  450

seq1  TGTGGTTTTGCCTCTACATAAGAGTGCAACTACACTTACCCTGAACTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTTGCCTCTACATAAGAGTGCAACTACACTTACCCTGAACTACT  500

seq1  GTTGTGATTATTTAAATGAGAAGAAATGTGTAAATCTTCTTGTGAGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGATTATTTAAATGAGAAGAAATGTGTAAATCTTCTTGTGAGCAGC  550

seq1  AGCCAGCCTAGGTGAGAGAAACAGCCTAAGTCCATTTCCATGCAGAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCCTAGGTGAGAGAAACAGCCTAAGTCCATTTCCATGCAGAATTC  600


seq1: chr2_141837439_141838541
seq2: B6Ng01-323I12.g_66_1164

seq1  GAATTCCAGGATAGCCAGAGCTACATAGTGAGATCCTGTATCATTAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAGCCAGAGCTACATAGTGAGATCCTGTATCATTAGTTC  50

seq1  TGTCCCAGTGAGAGGGATAGCCTTCCATTTATCTAGCAGCATTCTCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAGTGAGAGGGATAGCCTTCCATTTATCTAGCAGCATTCTCTGAG  100

seq1  ACTGTTCTCAGGTTAGCCTGTATACAAGTCATGAGAATGAATCCCTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCTCAGGTTAGCCTGTATACAAGTCATGAGAATGAATCCCTCTGA  150

seq1  TTCTGAGTGCAATAGGAAACCATCAGATTGTAAGTTAAGTAACACATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTGCAATAGGAAACCATCAGATTGTAAGTTAAGTAACACATGAC  200

seq1  TGGATGTGCATTGAAAGAAAATCCTCTATGTGTGTTTGGAACTCAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTGCATTGAAAGAAAATCCTCTATGTGTGTTTGGAACTCAGCAGA  250

seq1  GAGGGATATTACAGGGCGGCCAATAAGTAGGTCTCTGGAGCTGTGCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATATTACAGGGCGGCCAATAAGTAGGTCTCTGGAGCTGTGCAGGC  300

seq1  AAGGGCAGAAGGAAGGTCTTTCTGGTAAATGGACACTGGATGATAGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGAAGGAAGGTCTTTCTGGTAAATGGACACTGGATGATAGATGG  350

seq1  CAATCACACTGTATCCCCGAGAAGCCATGACAGGCTACTTCTGAGTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACACTGTATCCCCGAGAAGCCATGACAGGCTACTTCTGAGTTAAG  400

seq1  AGGAGGAAAACGAAGGAAGAATCCAGGATGATCCTCAGAAGTACAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAAACGAAGGAAGAATCCAGGATGATCCTCAGAAGTACAAATAT  450

seq1  AGGAACAAAGTGTGCTATGATAGTAAAACTAAATGAAATAGTGATGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAAAGTGTGCTATGATAGTAAAACTAAATGAAATAGTGATGAAAG  500

seq1  TAAGCATATTGGTCTGTATCAAATTTAGGACCCCTATAGGTTAGAAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATATTGGTCTGTATCAAATTTAGGACCCCTATAGGTTAGAAAGAG  550

seq1  CACATCCTAGTAAACAGAGGAATGGAGGTTCTGTCATAGGGGTCTGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCTAGTAAACAGAGGAATGGAGGTTCTGTCATAGGGGTCTGCATG  600

seq1  CATGCCGAGGAACAAGATGAAACTGGAAAAGTATATTTGAAGAGTGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCGAGGAACAAGATGAAACTGGAAAAGTATATTTGAAGAGTGTGAG  650

seq1  ATAATACAAGGAATGCTTTCTTCTTAATAATTGCTTGTGAGTTTTGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACAAGGAATGCTTTCTTCTTAATAATTGCTTGTGAGTTTTGGAAA  700

seq1  ATTGAATGCCACAAATATAACTCTCAGTTAAATGCCTCCTATGTGAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGCCACAAATATAACTCTCAGTTAAATGCCTCCTATGTGAGCAG  750

seq1  AATTCTTTATATTGTCCAATTGTACTATGGAATAATTTATATCAAATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTATATTGTCCAATTGTACTATGGAATAATTTATATCAAATTAA  800

seq1  TCACCCATGATTTTTGTCATCTAAGAACTCGTG-TTCGAAAATACACCAT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCACCCATGATTTTTGTCATCTAAGAACTCGTGTTTCGAAAATACACCAT  850

seq1  GATGATAGGATTAACCAAAATTCCATCTCCCTTG-CCTTCTCTGGAACTT  898
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATGATAGGATTAACCAAAATTCCATCTCCCTTGCCCTTCTCTGGAACTT  900

seq1  TGTAATAACCATTCATACTATCATTATAGTCAGTAGGGACCTCTAATTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAACCATTCATACTATCATTATAGTCAGTAGGGACCTCTAATTCA  950

seq1  TGGATTTATTTTTCTATCTTGTTCTTATAGAAATACTTGAAGTGTAAATT  998
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGATTTATTTTTCTATCTTGTTCTTATAGAAATACTTGAAGTGT-AATT  999

seq1  CTGGGTATCATCTCCTGTGTGATTTATTGAACAGCTC-TATGTAGAAATC  1047
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGGGTATCATCTCCTGTGTGATTTATTGAACAGCTCTTATGTAGAAATC  1049

seq1  TCTATTTTGACCTTCAAATATGACAATACAGCCCTTTGTTGGTTAAGCAA  1097
      |||||||||||| |||||||||||||||||||| |||||  ||  ||| |
seq2  TCTATTTTGACC-TCAAATATGACAATACAGCCTTTTGT--GT--AGC-A  1093

seq1  TTTTTC  1103
      ||||||
seq2  TTTTTC  1099


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