BAC Information

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BAC

Clone NameB6Ng01-323N07
Chromosome2 (Build37)
Map Location 89,035,319 - 89,134,063
singlet/doubletdoublet
Overlap geneLOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229
Upstream geneOlfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226
Downstream geneOlfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323N07.bB6Ng01-323N07.g
ACCGA112306GA112307
length1,201916
definitionB6Ng01-323N07.b B6Ng01-323N07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,035,319 - 89,036,533)(89,133,476 - 89,134,063)
sequence
gaattcactataaaaccatactgccttacctgctcatccctagtagttat
atggtcaaatttgaaattatcaaaagtcactagtggtagtattcattttc
aattctagtataatgaatttaaaagaaaattctactgtttgcccacagaa
tatacttccccaaatatgtgtaaatactccagctttcagactaattttcc
ttaggcaatcacaatccaaaaaatttctatatcttttcctgtaaaatact
tttatgagcaaacatatacatgcatatacatattcatctttacgtatttg
tgtgcataaatgcctacagttacaaatatatatgtatataagaatgtgct
ctgacaagaaaatgagatgcttcaatgacttacatctaaaacaagtagac
attactttgcatatttataagtaatcaagctatcatctgagagttcattt
atttctcaatgattatatttacatgatgacctaaatcaattcctcagtag
catgtataatatgaactccagccactatcaggcaaaagccaaggaaacag
tcatgtgaaacagaccctgtaaagtcactggaacaggcagcaatcactta
cagtaagttaggtaatcactaattagtttacaaattgtcattcagagata
aagcagaatggataaataattttagtaagaagattgcaaggcatgatgcc
cacgcatggaaagtcagaatgaaactcagcatttcacacaatgaaaaatg
caaaggaaaaaaaataaactaccctacaatcttgatatgtatactgagat
ctaaatcctcaccttttcctgctctgttcttagtaccttcgtatgttctt
taaaattaacgatgcaagataaatagtcctacatgagcctttgtgtaaga
agaaaactacgtgagtagttccaaacaaatatagcttctatattaatttt
aacattaagtgaaatgatctttatcattctaattttaattaagattttca
atgctagtttgttgcaaatgaaatggcaccatcgtttgtccagtgaaaca
gttccgaaactcatgtaacacatcactatggaaaatagttatatgtatca
tggcctcatgatccacaaggttacactacatcaaaatataggttgacctg
acccaggtagctagatatctacaatattaaggtttacagccctgaaaatt
a
gaattccttataaatcatatgattattgtttagaacatgaaaaatgtaat
aatattcatggtattattgggagattttttttttgcgctgtgtattcaca
tactgattactgtgtctaatatctggttgcagtccaaatgttggcattgt
caagcatctcccgtgtcactggtatgtaaaaattgttttccatcatctct
gattggttactaaagatctgatcagccaatagctggacaggagaggagga
gggaagatacctgatctcagtgagggggtctcaggtggaaagtggccaag
gcaattcaccatgagcaatactgcatgaagatttgccatgagcttgtggc
catgagagagttgaagagaacacgagttgaacaggaacagccagggaaag
atgaatatggcaagtaacaaggcacatggctgggtagtaggcagcctaat
caaggtagattaaggttagaatggatgagtatctgccaagctatagtgcc
tgaagcctttcaataaaaatatctgacctccatgttattactcagagcaa
ggtcaggcatataaaagccctgatggtataaactgatagtaagttaagag
tacacactcactttaagtggaagtagaatgtctatgtaacaataacctgc
aaaggttaaacttaatagcaccatgtaaacttgcttactaaatcactgag
tggtcagctctaacatttgaacctcagcaagacactcagatatccttttt
aatattttaagtcagacttcaacacacatttttaatatgcagtgtagcta
aaatcttaacatttaatcaaactgtgacatacataatatggctatctggt
tatctttctaaatgtctctattacaacttacttctcaatgtctttctcaa
tacatatggtaccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89035319_89036533
seq2: B6Ng01-323N07.b_50_1250

seq1  GAATTCACTATAAAACCATACTGCCTTACCTGCTCATCCCTAGTAGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATAAAACCATACTGCCTTACCTGCTCATCCCTAGTAGTTAT  50

seq1  ATGGTCAAATTTGAAATTATCAAAAGTCACTAGTGGTAGTATTCATTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAAATTTGAAATTATCAAAAGTCACTAGTGGTAGTATTCATTTTC  100

seq1  AATTCTAGTATAATGAATTTAAAAGAAAATTCTACTGTTTGCCCACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGTATAATGAATTTAAAAGAAAATTCTACTGTTTGCCCACAGAA  150

seq1  TATACTTCCCCAAATATGTGTAAATACTCCAGCTTTCAGACTAATTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCCCCAAATATGTGTAAATACTCCAGCTTTCAGACTAATTTTCC  200

seq1  TTAGGCAATCACAATCCAAAAAATTTCTATATCTTTTCCTGTAAAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCAATCACAATCCAAAAAATTTCTATATCTTTTCCTGTAAAATACT  250

seq1  TTTATGAGCAAACATATACATGCATATACATATTCATCTTTACGTATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGCAAACATATACATGCATATACATATTCATCTTTACGTATTTG  300

seq1  TGTGCATAAATGCCTACAGTTACAAATATATATGTATATAAGAATGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATAAATGCCTACAGTTACAAATATATATGTATATAAGAATGTGCT  350

seq1  CTGACAAGAAAATGAGATGCTTCAATGACTTACATCTAAAACAAGTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAGAAAATGAGATGCTTCAATGACTTACATCTAAAACAAGTAGAC  400

seq1  ATTACTTTGCATATTTATAAGTAATCAAGCTATCATCTGAGAGTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTGCATATTTATAAGTAATCAAGCTATCATCTGAGAGTTCATTT  450

seq1  ATTTCTCAATGATTATATTTACATGATGACCTAAATCAATTCCTCAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAATGATTATATTTACATGATGACCTAAATCAATTCCTCAGTAG  500

seq1  CATGTATAATATGAACTCCAGCCACTATCAGGCAAAAGCCAAGGAAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATAATATGAACTCCAGCCACTATCAGGCAAAAGCCAAGGAAACAG  550

seq1  TCATGTGAAACAGACCCTGTAAAGTCACTGGAACAGGCAGCAATCACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGAAACAGACCCTGTAAAGTCACTGGAACAGGCAGCAATCACTTA  600

seq1  CAGTAAGTTAGGTAATCACTAATTAGTTTACAAATTGTCATTCAGAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGTTAGGTAATCACTAATTAGTTTACAAATTGTCATTCAGAGATA  650

seq1  AAGCAGAATGGATAAATAATTTTAGTAAGAAGATTGCAAGGCATGATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAATGGATAAATAATTTTAGTAAGAAGATTGCAAGGCATGATGCC  700

seq1  CACGCATGGAAAGTCAGAATGAAACTCAGCATTTCACACAATGAAAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCATGGAAAGTCAGAATGAAACTCAGCATTTCACACAATGAAAAATG  750

seq1  CAAAGGAAAAAAAATAAACTACCCTACAATCTTGATATGTATACTGAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAAAAAAATAAACTACCCTACAATCTTGATATGTATACTGAGAT  800

seq1  CTAAATCCTCACCTTTTCCTGCTCTGTTCTTAGTACCTTCGTATGTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCCTCACCTTTTCCTGCTCTGTTCTTAGTACCTTCGTATGTTCTT  850

seq1  TAAAATTAACGATGCAAGATAAATAGTCCTACATGAGCCTTTGTGTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAACGATGCAAGATAAATAGTCCTACATGAGCCTTTGTGTAAGA  900

seq1  AGAAAACTACGTGAGTAGTTCCAAACAAAATATAGC-TCTATATTAATTT  949
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  AGAAAACTACGTGAGTAGTTCCAAAC-AAATATAGCTTCTATATTAATTT  949

seq1  TAACATTAAGTGAAATGATCTTTATCATTCTAATTTTAATTAAGATTTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTAAGTGAAATGATCTTTATCATTCTAATTTTAATTAAGATTTTC  999

seq1  AATGCTAGTTTGTTGCAAATGAAATGGCACCATCGTTTGTCCAGTGAAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAGTTTGTTGCAAATGAAATGGCACCATCGTTTGTCCAGTGAAAC  1049

seq1  AAGTTCCGAAACTCATGTTAACACATCCACTATGGAAAATAAGTATAATG  1099
       |||||||||||||||| |||||||| ||||||||||||||  ||| |||
seq2  -AGTTCCGAAACTCATG-TAACACAT-CACTATGGAAAATAGTTAT-ATG  1095

seq1  TAATCATGG-CTCATGAT-CACAAGGTTTAAATTACCATTTAAAATATA-  1146
      | ||||||| |||||||| ||||||| ||| | |||   | |||||||| 
seq2  T-ATCATGGCCTCATGATCCACAAGG-TTACACTAC--ATCAAAATATAG  1141

seq1  GTTGACCTGAACACAAGGTTTAGCATAGGTTTAATCCTACAATATTAAAG  1196
      ||||||||||   | |||  |||| ||| | |    ||||||||||||  
seq2  GTTGACCTGA--CCCAGG--TAGC-TAGATAT----CTACAATATTAA--  1180

seq1  GGGTTACAG--CTGAAAATTA  1215
      || ||||||  ||||||||||
seq2  GGTTTACAGCCCTGAAAATTA  1201

seq1: chr2_89133476_89134063
seq2: B6Ng01-323N07.g_67_654 (reverse)

seq1  TATCAGTTTATACCATCAGGGCTTTTATATGCCTGACCTTGCTCTGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTTTATACCATCAGGGCTTTTATATGCCTGACCTTGCTCTGAGTA  50

seq1  ATAACATGGAGGTCAGATATTTTTATTGAAAGGCTTCAGGCACTATAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATGGAGGTCAGATATTTTTATTGAAAGGCTTCAGGCACTATAGCT  100

seq1  TGGCAGATACTCATCCATTCTAACCTTAATCTACCTTGATTAGGCTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGATACTCATCCATTCTAACCTTAATCTACCTTGATTAGGCTGCCT  150

seq1  ACTACCCAGCCATGTGCCTTGTTACTTGCCATATTCATCTTTCCCTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCAGCCATGTGCCTTGTTACTTGCCATATTCATCTTTCCCTGGCT  200

seq1  GTTCCTGTTCAACTCGTGTTCTCTTCAACTCTCTCATGGCCACAAGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGTTCAACTCGTGTTCTCTTCAACTCTCTCATGGCCACAAGCTCA  250

seq1  TGGCAAATCTTCATGCAGTATTGCTCATGGTGAATTGCCTTGGCCACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAATCTTCATGCAGTATTGCTCATGGTGAATTGCCTTGGCCACTTT  300

seq1  CCACCTGAGACCCCCTCACTGAGATCAGGTATCTTCCCTCCTCCTCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGAGACCCCCTCACTGAGATCAGGTATCTTCCCTCCTCCTCTCCT  350

seq1  GTCCAGCTATTGGCTGATCAGATCTTTAGTAACCAATCAGAGATGATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCTATTGGCTGATCAGATCTTTAGTAACCAATCAGAGATGATGGA  400

seq1  AAACAATTTTTACATACCAGTGACACGGGAGATGCTTGACAATGCCAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTTTTACATACCAGTGACACGGGAGATGCTTGACAATGCCAACA  450

seq1  TTTGGACTGCAACCAGATATTAGACACAGTAATCAGTATGTGAATACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTGCAACCAGATATTAGACACAGTAATCAGTATGTGAATACACA  500

seq1  GCGCAAAAAAAAAATCTCCCAATAATACCATGAATATTATTACATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAAAAAAAAAATCTCCCAATAATACCATGAATATTATTACATTTTTC  550

seq1  ATGTTCTAAACAATAATCATATGATTTATAAGGAATTC  588
      ||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTAAACAATAATCATATGATTTATAAGGAATTC  588