BAC Information

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BAC

Clone NameB6Ng01-324E09
ChromosomeX (Build37)2 (Build37)
Map Location 66,532,776 - 66,533,502144,765,899 - 144,765,999
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG236844, LOC385372, LOC627888, LOC434788, Fmr1, Fmr1nb, LOC100040244, EG627927, LOC666882, LOC671950, LOC100040255
Downstream geneAff2, EG666577, 1700020N15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324E09.bB6Ng01-324E09.g
ACCGA112632GA112633
length1,1021,018
definitionB6Ng01-324E09.b B6Ng01-324E09.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(66,532,776 - 66,533,502)(144,765,899 - 144,765,999)
sequence
gaattccagtgtaattctattaggtttgcctttgttacttgactttatcc
cttgcagctttgaatagtctttctttgttctatacatctagtgttttgat
tattatgtggcaagatgatcttcttttctgatcaaatctatttggtgttc
tgtaagcttcttatatgtttataggtatctttttctttaggttagggaat
ttttttctatgattttgttgaaaatattttttgtacctttgagctatgaa
tcacctccttcttctgttcctattatacttaggtttggtcttttcataat
gtctcagattctgtggatgtttttgtctcataaattgtttaagtttaaca
ttttctttgactgttgtataaatttcttctattatatcttctctaactaa
cattttctcttccatctcctgtattctgttggtgatgctcacatctgtta
ttcctgttctcctccctaggttttccatctccaaaatttcctcagtttgt
gttttctttattgattctattttcattttcaaatcttgaatatttttatt
tttcccttcacctgtttgattgtctattttgttaaggaatttattcattt
tctctttaaagttgtctatcatcttcataagactgcattaagatcatttt
cttgtgcttcagctatgttaatataccctaggcttgctcttgttgtagtt
tgatcactggctgttgggggtgccaaattgccctggctcttgttgattct
attcttatgatagcctttatccatctgggttttgtagttatgataggttt
agatgatgaattctgagcttatctttgttggatatgtgggatttggatgt
tttttcccttggtttctgtttcatgtctgtctactggcctaagtgggcct
ggagttgtgacatatagctagtttttaggtccaatagttgtttcccctga
gttttttgtgggcctgtgttggctctgagtttgggtgtatactttgcctc
tgtgttccctagttctagattagctaggggtccctgtatgcctgaagaac
tctaggaaatgaagcctaggtgtggggctgaaaaatatggggtccaggtt
ta
gaattcaatgaaataatagaaaacttgaagaaaattcaagctgaaatgaa
gatggaaaaaaaaaaaaaaaaacaacaaccaaataatagcccaactagaa
aactgaagggaatgctttacaagtagaattaataaagcagaaagcagaat
attaggacccaaaataaagtagaagaaaaatactatgtcaaacaaataac
aagtatgaaaaaacataaaagcatagggaagaaacatgaaggaaatatga
gacatcataaaattataggaatagatatcaaatgagaatttcaagtcaat
agcataagaacagaacttcagcaagatcatagaagaaaagttccccaaac
taaggaaagacatgcccatactcataaaagatgcacactgaacacaaaat
aaataagaaaagaaagtccccatggcatatcttaggtaaaactataagca
tacattattttttaaagtgtatttaaaaatataagaagaaaatgataggt
tatatataatggaaaaccaatagattaattgttaatttctcagtagaaac
ttttaaagacagaagagccaacctagactactgtacccagtaaaactacc
tgccataactgaagaataaaaatagttattccacagcataaatagcttaa
aaattcatgtctaacagaccaaacctaaagaaagggcagaaacaatattc
acgctaaataggggaataataacaaccaaaattatgtagaaagaaaacaa
acaaagcaaaatttactaaaacactaagtatttctgagaagacagtaaca
gaactcaacaacacaatgaaagcaattaacacacacatttgttgttgttg
ttgctgtttttgttctttttttatttttctctcttatctttagagaccag
ggtttcttctgttgtagcctggctgtcctggaactcactatgtagaccaa
ggctggccttggaactcaaaatccacctgcctctgcctcccaaagtgctg
ggataaggtgtgcaccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_66532776_66533502
seq2: B6Ng01-324E09.b_418_1148

seq1  ATTTCTTCTATTATATCTTCTCTAACTAACATTTTCTCTTCCATCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTATTATATCTTCTCTAACTAACATTTTCTCTTCCATCTCCTG  50

seq1  TATTCTGTTGGTGATGCTCACATCTGTTATTCCTGTTCTCCTCCCTAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTTGGTGATGCTCACATCTGTTATTCCTGTTCTCCTCCCTAGGT  100

seq1  TTTCCATCTCCAAAATTTCCTCAGTTTGTGTTTTCTTTATTGATTCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTCCAAAATTTCCTCAGTTTGTGTTTTCTTTATTGATTCTATT  150

seq1  TTCATTTTCAAATCTTGAATATTTTTATTTTTCCCTTCACCTGTTTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTCAAATCTTGAATATTTTTATTTTTCCCTTCACCTGTTTGATT  200

seq1  GTCTATTTTGTTAAGGAATTTATTCATTTTCTCTTTAAAGTTGTCTATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTTGTTAAGGAATTTATTCATTTTCTCTTTAAAGTTGTCTATCA  250

seq1  TCTTCATAAGACTGCATTAAGATCATTTTCTTGTGCTTCAGCTATGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAAGACTGCATTAAGATCATTTTCTTGTGCTTCAGCTATGTTAA  300

seq1  TATACCCTAGGCTTGCTCTTGTTGTAGTTTGATCACTGGCTGTTGGGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCTAGGCTTGCTCTTGTTGTAGTTTGATCACTGGCTGTTGGGGGT  350

seq1  GCCAAATTGCCCTGGCTCTTGTTGATTCTATTCTTATGATAGCCTTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATTGCCCTGGCTCTTGTTGATTCTATTCTTATGATAGCCTTTATC  400

seq1  CATCTGGGTTTTGTAGTTATGATAGGTTTAGATGATGAATTCTGAGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGTTTTGTAGTTATGATAGGTTTAGATGATGAATTCTGAGCTTA  450

seq1  TCTTTGTTGGATATGTGGGATTTGGATGTTTTTTCCCTTGGTTTCTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTGGATATGTGGGATTTGGATGTTTTTTCCCTTGGTTTCTGTTT  500

seq1  CATGTCTGTCTACTGGCCTAAGT-GGCCTGGAGTTGTGACATATAGCTAG  549
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CATGTCTGTCTACTGGCCTAAGTGGGCCTGGAGTTGTGACATATAGCTAG  550

seq1  TTTTTAGGTCCAATAGGTTGTTTCCCCTGAGTTTTTTGT-GGCCTGTGTT  598
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  TTTTTAGGTCCAATA-GTTGTTTCCCCTGAGTTTTTTGTGGGCCTGTGTT  599

seq1  GGCTCTGAGGTTTTGGGTGTAATAC-TTGCCTCTGTGGTCCCTAGTTCTA  647
      |||||||||  ||||||||| |||| ||||||||||| ||||||||||||
seq2  GGCTCTGAG--TTTGGGTGT-ATACTTTGCCTCTGTGTTCCCTAGTTCTA  646

seq1  GATTAGCTAGGGGTCCCTG-ATG-CTGATAGAACTCTAGGAAATG-AGGC  694
      ||||||||||||||||||| ||| |||| |||||||||||||||| || |
seq2  GATTAGCTAGGGGTCCCTGTATGCCTGA-AGAACTCTAGGAAATGAAGCC  695

seq1  TAGGTTGTGGGCTGAAAA--ATGGGGTCCA-GTTTA  727
      |||||   ||||||||||  |||||||||| |||||
seq2  TAGGTGTGGGGCTGAAAAATATGGGGTCCAGGTTTA  731

seq1: chr2_144765899_144765999
seq2: B6Ng01-324E09.g_985_1085

seq1  CCTGGCTGTCCTGGAACTCACTCTGTAGACC-AGGCTGGCC-TCGAACTC  48
      |||||||||||||||||||||| |||||||| ||||||||| | ||||||
seq2  CCTGGCTGTCCTGGAACTCACTATGTAGACCAAGGCTGGCCTTGGAACTC  50

seq1  AGAAATCCACTTGCCTCTGCCTCCC-GAGTGCTGGGATTAAAGGTGTGCT  97
      | |||||||| ||||||||||||||  |||||||||||  ||||||||| 
seq2  A-AAATCCACCTGCCTCTGCCTCCCAAAGTGCTGGGAT--AAGGTGTGCA  97

seq1  CCAC  101
      ||||
seq2  CCAC  101