BAC Information

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BAC

Clone NameB6Ng01-324P23
Chromosome2 (Build37)5 (Build37)
Map Location 168,947,664 - 168,948,272150,975,924 - 150,976,790
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4, Zfp64, LOC100043909
Downstream geneEG668954, Tshz2, LOC100043737, LOC100043910, Zfp217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324P23.bB6Ng01-324P23.g
ACCGA113168GA113169
length788877
definitionB6Ng01-324P23.b B6Ng01-324P23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(168,947,664 - 168,948,272)(150,975,924 - 150,976,790)
sequence
gaattctgttgtgggtttggtctaatgctacttgtattatgttaatttga
cacccccgccccaaattacacaggaatctgcacttctgcacgtaagatgc
tgagggctggcagccaatggctgggcagggagaagaggtgaggggggagg
gcgcgaggtgggggggcaggatttagccggctgttagtgctggtctaggg
cctaaaaaactgtgcctagtatcccggggtatcccaggaagaaacctggg
tcctcgcttttcagaaaccaggccaagtataaacattctccaggtggcag
aaattcaagtttctgggtgataaaaatcaaatcaaaaacaaataagggtc
acttccagtatgggagtcttcatactgggccacagagccacgagtaaaag
aatttctgatggaagagtttggcggaaggactgagggagcgggaggggtc
gaggacaccacaagaagatctacagagtaaactaagctgggcccctgggg
ggctcccagagactgaaccaccaaccagagagcatgcagggctgggccta
gcttatgtagcaggggtgcagcttggtcttcacccgagtcccctaacaat
gggagtggggactgttttctgactcttgttgcctgcctttggatcctttt
cccttagtgaggctgccttgtctggcctcagtggggaaagatgctcttag
tccttgctgtgatttaatgtgccagggtggggtggtactcctagaaggga
agagaatgaggaagggagcacggtgggactggtgaggg
gaattcagttcttaaaacacaaatcacacagccttgtgcaggaaacagaa
tgtaaatgagagaggccctgtggtccagggatccccacacatgaacaacc
caaggagtactctgattggcagactagagaagatcttaggaatctagaat
gctggggtggggtggggtgacctgaaacctgaaccccctcaatgctaata
aagcctcagggcccacggcaagcagaacccacaggggaaggtggtgactc
taaagtgacccagtgtgagccttgggccacccttgtgcattctgcaggcc
tttctcagctttaagaggccctctcggggtcagggttggcatcctcacct
gacttagtgtgagtgtttggagatgatgccgtctgcttccccatcatggt
gactcagtgctccttacactcttccaaagcgtggggtctatatgtgctca
atgtgggtggagattcccgtcctcatggattaccctgttgactgtgaagg
agagtttggtaaacagttccctgacaagatccttatttactctggacccc
tccctgcccatcccatgattatatttcaaagcctctatctctatcacgca
taaacgtaacctttgctttatgccctcatagaaacataaatggaaagtga
gtctaagaaaccctgggcctttgcgtatgcaaaagctctggcctctttga
ttgcagcttgacctggctttccttccacaaaaccagagcggacctgtact
gctaccgggccatttattaccacatctcttggagggggtgtagaaaggaa
cttctgagcagatattacaatagaaagcatgtgcccagttcagatctttg
accttaaatatgcatgtttcttagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_168947664_168948272
seq2: B6Ng01-324P23.b_220_833

seq1  AGCCGGCTGTTAGTGCTAGTCTAGGGCCTAGAAGACTGTGCCGAGTATCC  50
      ||||||||||||||||| |||||||||||| || |||||||| |||||||
seq2  AGCCGGCTGTTAGTGCTGGTCTAGGGCCTAAAAAACTGTGCCTAGTATCC  50

seq1  CGGGGTATCCCAGGAAGAAACCTGGGTCCTCGCTTTTCAGAAACCAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTATCCCAGGAAGAAACCTGGGTCCTCGCTTTTCAGAAACCAGGCC  100

seq1  AAGTATAAACATTCTCCAGGTGGCAGAAATTCAAGTTTCTGGGTGATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAACATTCTCCAGGTGGCAGAAATTCAAGTTTCTGGGTGATAAA  150

seq1  AATCAAATCAAAAACAAATAAGGGTCACTTCCAGTATGGGAGTCTTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATCAAAAACAAATAAGGGTCACTTCCAGTATGGGAGTCTTCATA  200

seq1  CTGGGCCACAGAGCCACGAGTAAAAGAATTTCTGATGGAAGAGTTTGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCACAGAGCCACGAGTAAAAGAATTTCTGATGGAAGAGTTTGGCG  250

seq1  GAAGGACTGAGGGAGCGGGAGGGGTCGAGGACACCACAAGAAGATCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACTGAGGGAGCGGGAGGGGTCGAGGACACCACAAGAAGATCTACA  300

seq1  GAGTAAACTAAGCTGGGCCCCTGGGGGGCTCCCAGAGACTGAACCACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAACTAAGCTGGGCCCCTGGGGGGCTCCCAGAGACTGAACCACCAA  350

seq1  CCAGAGAGCATGCAGGGCTGGGCCTAGCTTATGTAGCAGGGGTGCAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAGCATGCAGGGCTGGGCCTAGCTTATGTAGCAGGGGTGCAGCTT  400

seq1  GGTCTTCACCCGAGTCCCCTAACAATGGGAGTGGGGACTG-TTTCTGACT  449
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGTCTTCACCCGAGTCCCCTAACAATGGGAGTGGGGACTGTTTTCTGACT  450

seq1  C-TGTTGCCTGCCTTTGGATCCTTTTCCCTTAGTGAGGCTGCCTTGTCTG  498
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGCCTGCCTTTGGATCCTTTTCCCTTAGTGAGGCTGCCTTGTCTG  500

seq1  GCCTCAGTGGGGAAAGATGCTCTTAGTCC-TGCTGTGATTTAATGTGCCA  547
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCCTCAGTGGGGAAAGATGCTCTTAGTCCTTGCTGTGATTTAATGTGCCA  550

seq1  GGGTGGGGTGGTACTCAGAGAAGGGAAGAGAAGGAGG-AGGGAGCACGGT  596
      ||||||||||||||||  |||||||||||||| |||| ||||||||||||
seq2  GGGTGGGGTGGTACTCCTAGAAGGGAAGAGAATGAGGAAGGGAGCACGGT  600

seq1  GGGACTGG-GAGGG  609
      |||||||| |||||
seq2  GGGACTGGTGAGGG  614

seq1: chr5_150975924_150976790
seq2: B6Ng01-324P23.g_65_941

seq1  GAATTCAGTTCTTAAAACACAAATCACACAGCCTTGTGCAGGAAACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCTTAAAACACAAATCACACAGCCTTGTGCAGGAAACAGAA  50

seq1  TGTAAATGAGAGAGGCCCTGTGGTCCAGGGATCCCCACACATGAACAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAGAGAGGCCCTGTGGTCCAGGGATCCCCACACATGAACAACC  100

seq1  CAAGGAGTACTCTGATTGGCAGACTAGAGAAGATCTTAGGAATCTAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGTACTCTGATTGGCAGACTAGAGAAGATCTTAGGAATCTAGAAT  150

seq1  GCTGGGGTGGGGTGGGGTGACCTGAAACCTGAACCCCCTCAATGCTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGTGGGGTGGGGTGACCTGAAACCTGAACCCCCTCAATGCTAATA  200

seq1  AAGCCTCAGGGCCCACGGCAAGCAGAACCCACAGGGGAAGGTGGTGACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCAGGGCCCACGGCAAGCAGAACCCACAGGGGAAGGTGGTGACTC  250

seq1  TAAAGTGACCCAGTGTGAGCCTTGGGCCACCCTTGTGCATTCTGCAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGACCCAGTGTGAGCCTTGGGCCACCCTTGTGCATTCTGCAGGCC  300

seq1  TTTCTCAGCTTTAAGAGGCCCTCTCGGGGTCAGGGTTGGCATCCTCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGCTTTAAGAGGCCCTCTCGGGGTCAGGGTTGGCATCCTCACCT  350

seq1  GACTTAGTGTGAGTGTTTGGAGATGATGCCGTCTGCTTCCCCAGCATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GACTTAGTGTGAGTGTTTGGAGATGATGCCGTCTGCTTCCCCATCATGGT  400

seq1  GACTCAGTGCTCCTTACACTCTTCCAAAGCGTGGGGTCTATATGTGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTGCTCCTTACACTCTTCCAAAGCGTGGGGTCTATATGTGCTCA  450

seq1  ATGTGGGTGGAGATTCCCGTCCTCCTGGATTACCCTGGCCACTGTGAAGG  500
      |||||||||||||||||||||||| ||||||||||||   ||||||||||
seq2  ATGTGGGTGGAGATTCCCGTCCTCATGGATTACCCTGTTGACTGTGAAGG  500

seq1  AGAGAATTGGTAAACAGTTCGATTAACAAGATCCTTATTTACTC--GACC  548
      ||||  ||||||||||||||   | |||||||||||||||||||  ||  
seq2  AGAG-TTTGGTAAACAGTTC-CCTGACAAGATCCTTATTTACTCTGGA--  546

seq1  CCCCCTCCCTGCCCA-CTCATG-CTAGATTCGAAAGCCTCTACATCTTTC  596
       |||||||||||||| | ||||  || |||  ||||||||||  ||| ||
seq2  -CCCCTCCCTGCCCATCCCATGATTATATTTCAAAGCCTCTATCTCTATC  595

seq1  ACACAT-CACGTAGCCATTGCTTTATGCACACATGGGAACTTGAGTGGCA  645
      || |||  ||||| || ||||||||||| | ||| | ||| | | ||| |
seq2  ACGCATAAACGTAACCTTTGCTTTATGCCCTCATAGAAACATAAATGGAA  645

seq1  GGTGAGTCTAGGAATCCCT-GGCCTTTGCGTATGC-AAAGCTCTGGCCTC  693
       ||||||||| ||| |||| ||||||||||||||| ||||||||||||||
seq2  AGTGAGTCTAAGAAACCCTGGGCCTTTGCGTATGCAAAAGCTCTGGCCTC  695

seq1  -TTGATTGCAGC-TGACCTGGC-TTCCTTCCACAAAACCAGAGCGGACCT  740
       ||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  TTTGATTGCAGCTTGACCTGGCTTTCCTTCCACAAAACCAGAGCGGACCT  745

seq1  GTACTGCTACCGGGCCATTAATTACCACATCTCTTGGAGGGGGTGTAGAA  790
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTACTGCTACCGGGCCATTTATTACCACATCTCTTGGAGGGGGTGTAGAA  795

seq1  AGGAACTTCTGAGCAGATATTACAA-AG-AAGCATGTGCCAAG-TCAG-T  836
      ||||||||||||||||||||||||| || ||||||||||| || |||| |
seq2  AGGAACTTCTGAGCAGATATTACAATAGAAAGCATGTGCCCAGTTCAGAT  845

seq1  CTTTGACC-TAGATATGCATGTTTCTTAGACT  867
      |||||||| || ||||||||||||||||||||
seq2  CTTTGACCTTAAATATGCATGTTTCTTAGACT  877