BAC Information

Click to search

BAC

Clone NameB6Ng01-325B15
Chromosome2 (Build37)
Map Location 123,906,538 - 124,050,229
singlet/doubletdoublet
Overlap gene4930517E11Rik
Upstream genenone
Downstream geneLOC100043360, Sema6d, LOC100043367, LOC100043369, Slc24a5, Myef2, LOC100043375, Slc12a1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325B15.bB6Ng01-325B15.g
ACCGA113246GA113247
length1,041976
definitionB6Ng01-325B15.b B6Ng01-325B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,906,538 - 123,907,411)(124,049,256 - 124,050,229)
sequence
gaattctttgtttagctctgtgccccgttttttaatggggttatttgatt
ttctggagtctagcttcttgagttctttgattatatatgggctagtcagt
ggcccatactacatatgtagcagaggattgctttgcctggtctcagtggg
aggggatactcttggttccatggagacttgatgcctgtggagaaggggga
tgctacctctagaagataggtgggggtcagcaccttctcagaggcaaaga
agaaaggagatatggtggggtgcttgcggaggagggactaggaagggggc
aacatttgaaatgtaaataaataaaataatatataaaaaggggaagaaca
ttttccaaactcataacaaaaatcagggctggagagatggctcagctatt
aaaagataggctcacaaccaaaaacataacaaaaagcaaactattaaata
ctttccctgatgaatatagacacaaaagttcctgtccaaaataatgctta
caagatgaattttgtaacacattaattccacacttagaaattgaagctaa
atccttatctttcaccttgcaaaaaatattgatttagagtggaccaaaac
tttaattaatttaaaaactggaaacaaggcaagtactaaagggaagcact
ggaaagggtttaaaaatagagatgcagggaagcacttcttagacaggatt
ctgataaaacagaaaagagcctaatgattgacatctagggctgtatagaa
tcacacaatgcagatggtctgcagagtgggaagagatccatgctatcaac
acttcagatgaggttaatatctgaagtatatggacatgcaaaaactaaac
gtcaaaagaaaaaataaaatcctacaatggccagtcaacaaatcgcccaa
tgatatgcaaaattagttctcaaaagaagaaacacagacatccaagacat
actttagaaggcatttaatgcacatgggccattcaggaaatcaattaaaa
ttgccttagagatcccatctcactacgtcagggatatgatc

gaattccatgaggctctgatcacactttcagatggccatagtataattca
catggtcttcaacactggtcagtgccatttctatttattgtgaattgagg
tggaggctgagtaggtgcttactgacttttgaagtaccctctaattttca
gatgatcctattcttatcttccccttctttccactatcttgttatatgct
cacctttcctagatgtgcagctttataaggatagtggaagagcagaaaag
aaaaaaatatagtaagacagaaagactagagtgtggacaggattgagtgt
gaggagatgggaaatttggtcccaggctgcttggagagccgacattttat
gttgcttagcttgccatgtagctggtgtcaaaggcaatactcagaaacac
tttaaacagacttggaagagcaattttaaaccgccaaatgcctctgaaac
tgtttttgtaattacagcctctgcatggagaaaacatggccttcttctaa
ttgacttgccctcctagtgtgaaggtctgatcactccaatctgcgatgta
aatcacacaaaagtatcctagacagtcggagaagtcaggttctgatgaca
gtcgagtgcaccgggttctttatatcttcctcagaggtggcttaaaagct
gttggtgcaggtgcatcattgtgagaggaacagccaatagagatgcggct
cttaggacagagagggagtatggtggtggagcagaaggcagtctctccaa
aacctgtgatagcaaacacctttctaaagctgctgagcacacattcgcag
tctttattctgccagttagcgcatctgatttatgcttcccaccttttctc
ccaggttcctgaaaagctttcttgggtaacaccatttgcaataaagtgaa
agttgttcttcatcttgtatataccaaggcgaaatagtagctcatcctcg
gagatatggagaggaggaagggatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_123906538_123907411
seq2: B6Ng01-325B15.b_47_920

seq1  GAATTCTTTGTTTAGCTCTGTGCCCCGTTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTGCCCCGTTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCTAGCTTCTTGAGTTCTTTGATTATATATGGGCTAGTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCTAGCTTCTTGAGTTCTTTGATTATATATGGGCTAGTCAGT  100

seq1  GGCCCATACTACATATGTAGCAGAGGATTGCTTTGCCTGGTCTCAGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATACTACATATGTAGCAGAGGATTGCTTTGCCTGGTCTCAGTGGG  150

seq1  AGGGGATACTCTTGGTTCCATGGAGACTTGATGCCTGTGGAGAAGGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATACTCTTGGTTCCATGGAGACTTGATGCCTGTGGAGAAGGGGGA  200

seq1  TGCTACCTCTAGAAGATAGGTGGGGGTCAGCACCTTCTCAGAGGCAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCTCTAGAAGATAGGTGGGGGTCAGCACCTTCTCAGAGGCAAAGA  250

seq1  AGAAAGGAGATATGGTGGGGTGCTTGCGGAGGAGGGACTAGGAAGGGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAGATATGGTGGGGTGCTTGCGGAGGAGGGACTAGGAAGGGGGC  300

seq1  AACATTTGAAATGTAAATAAATAAAATAATATATAAAAAGGGGAAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGAAATGTAAATAAATAAAATAATATATAAAAAGGGGAAGAACA  350

seq1  TTTTCCAAACTCATAACAAAAATCAGGGCTGGAGAGATGGCTCAGCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAACTCATAACAAAAATCAGGGCTGGAGAGATGGCTCAGCTATT  400

seq1  AAAAGATAGGCTCACAACCAAAAACATAACAAAAAGCAAACTATTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATAGGCTCACAACCAAAAACATAACAAAAAGCAAACTATTAAATA  450

seq1  CTTTCCCTGATGAATATAGACACAAAAGTTCCTGTCCAAAATAATGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTGATGAATATAGACACAAAAGTTCCTGTCCAAAATAATGCTTA  500

seq1  CAAGATGAATTTTGTAACACATTAATTCCACACTTAGAAATTGAAGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGAATTTTGTAACACATTAATTCCACACTTAGAAATTGAAGCTAA  550

seq1  ATCCTTATCTTTCACCTTGCAAAAAATATTGATTTAGAGTGGACCAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTATCTTTCACCTTGCAAAAAATATTGATTTAGAGTGGACCAAAAC  600

seq1  TTTAATTAATTTAAAAACTGGAAACAAGGCAAGTACTAAAGGGAAGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAATTTAAAAACTGGAAACAAGGCAAGTACTAAAGGGAAGCACT  650

seq1  GGAAAGGGTTTAAAAATAGAGATGCAGGGAAGCACTTCTTAGACAGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGTTTAAAAATAGAGATGCAGGGAAGCACTTCTTAGACAGGATT  700

seq1  CTGATAAAACAGAAAAGAGCCTAATGATTGACATCTAGGGCTGTATAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAAACAGAAAAGAGCCTAATGATTGACATCTAGGGCTGTATAGAA  750

seq1  TCACACAATGCAGATGGTCTGCAGAGTGGGAAGAGATCCATGCTATCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAATGCAGATGGTCTGCAGAGTGGGAAGAGATCCATGCTATCAAC  800

seq1  ACTTCAGATGAGGTTAATATCTGAAGTATATGGACATGCAAAAACTAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGATGAGGTTAATATCTGAAGTATATGGACATGCAAAAACTAAAC  850

seq1  GTCAAAAGAAAAAATAAAATCCTA  874
      ||||||||||||||||||||||||
seq2  GTCAAAAGAAAAAATAAAATCCTA  874


seq1: chr2_124049256_124050229
seq2: B6Ng01-325B15.g_69_1044 (reverse)

seq1  CCATCCCTTCCTCCTCT-CATATCTCCGAGGATG-GCTACTATTTCCCCT  48
      ||||||||||||||||| |||||||||||||||| ||||||||||| |||
seq2  CCATCCCTTCCTCCTCTCCATATCTCCGAGGATGAGCTACTATTTCGCCT  50

seq1  TGGTATATAC-AGATGAAGAACAACTTTCACTTTATTTGCAAATGGTGTT  97
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  TGGTATATACAAGATGAAGAACAACTTTCACTTTA-TTGCAAATGGTGTT  99

seq1  ACCCAAGAAAGCTTTTCAGGAACCTGGGAGAAAAGGTGGGAAGCATAAAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAAAGCTTTTCAGGAACCTGGGAGAAAAGGTGGGAAGCATAAAT  149

seq1  CAGATGCGCTAACTGGCAGAATAAAGACTGCGAATGTGTGCTCAGCAGCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCGCTAACTGGCAGAATAAAGACTGCGAATGTGTGCTCAGCAGCT  199

seq1  TTAGAAAGGTGTTTGCTATCACAGGTTTTGGAGAGACTGCCTTCTGCTCC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGGTGTTTGCTATCACAGGTTTTGGAGAGACTGCCTTCTGCTCC  249

seq1  ACCACCATACTCCCTCTCTGTCCTAAGAGCCGCATCTCTATTGGCTGTTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCATACTCCCTCTCTGTCCTAAGAGCCGCATCTCTATTGGCTGTTC  299

seq1  CTCTCACAATGATGCACCTGCACCAACAGCTTTTAAGCCACCTCTGAGGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACAATGATGCACCTGCACCAACAGCTTTTAAGCCACCTCTGAGGA  349

seq1  AGATATAAAGAACCCGGTGCACTCGACTGTCATCAGAACCTGACTTCTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAAGAACCCGGTGCACTCGACTGTCATCAGAACCTGACTTCTCC  399

seq1  GACTGTCTAGGATACTTTTGTGTGATTTACATCGCAGATTGGAGTGATCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTAGGATACTTTTGTGTGATTTACATCGCAGATTGGAGTGATCA  449

seq1  GACCTTCACACTAGGAGGGCAAGTCAATTAGAAGAAGGCCATGTTTTCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCACACTAGGAGGGCAAGTCAATTAGAAGAAGGCCATGTTTTCTC  499

seq1  CATGCAGAGGCTGTAATTACAAAAACAGTTTCAGAGGCATTTGGCGGTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGAGGCTGTAATTACAAAAACAGTTTCAGAGGCATTTGGCGGTTT  549

seq1  AAAATTGCTCTTCCAAGTCTGTTTAAAGTGTTTCTGAGTATTGCCTTTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGCTCTTCCAAGTCTGTTTAAAGTGTTTCTGAGTATTGCCTTTGA  599

seq1  CACCAGCTACATGGCAAGCTAAGCAACATAAAATGTCGGCTCTCCAAGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCTACATGGCAAGCTAAGCAACATAAAATGTCGGCTCTCCAAGCA  649

seq1  GCCTGGGACCAAATTTCCCATCTCCTCACACTCAATCCTGTCCACACTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGACCAAATTTCCCATCTCCTCACACTCAATCCTGTCCACACTCT  699

seq1  AGTCTTTCTGTCTTACTATATTTTTTTCTTTTCTGCTCTTCCACTATCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCTGTCTTACTATATTTTTTTCTTTTCTGCTCTTCCACTATCCT  749

seq1  TATAAAGCTGCACATCTAGGAAAGGTGAGCATATAACAAGATAGTGGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGCTGCACATCTAGGAAAGGTGAGCATATAACAAGATAGTGGAAA  799

seq1  GAAGGGGAAGATAAGAATAGGATCATCTGAAAATTAGAGGGTACTTCAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAAGATAAGAATAGGATCATCTGAAAATTAGAGGGTACTTCAAA  849

seq1  AGTCAGTAAGCACCTACTCAGCCTCCACCTCAATTCACAATAAATAGAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTAAGCACCTACTCAGCCTCCACCTCAATTCACAATAAATAGAAA  899

seq1  TGGCACTGACCAGTGTTGAAGACCATGTGAATTATACTATGGCCATCTGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTGACCAGTGTTGAAGACCATGTGAATTATACTATGGCCATCTGA  949

seq1  AAGTGTGATCAGAGCCTCATGGAATTC  974
      |||||||||||||||||||||||||||
seq2  AAGTGTGATCAGAGCCTCATGGAATTC  976


| Home | SequenceCutter | Blast | Download |