BAC Information

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BAC

Clone NameB6Ng01-325C08
Chromosome2 (Build37)
Map Location 92,392,994 - 92,394,012
singlet/doubletsinglet
Overlap genenone
Upstream geneCkap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik, Chrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775
Downstream geneLOC100043205, Chst1, Syt13, LOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325C08.bB6Ng01-325C08.g
ACCGA113280GA113281
length1,1041,018
definitionB6Ng01-325C08.b B6Ng01-325C08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggaattcacagccaccagtaacttcagctccatggggatcta
acactctcttctgccttccacaggcccctacacacacacagcacataaac
acttaaatttgggaatcatgtataattaaatttttttttctaaaagctgc
attcaaaatcatgtgatgaccaatacacacaatattttgagtagaacttg
ataaatgttaccttgaattctcactggaaacaatggcttggtgtttctaa
ttcaccaattgctgtgagtttatagacgccattgccttggatgacaaaag
tcaaccacatgtgacccatgggctcaacttggttctacctctgaagctcc
cctcatgctataaggggatgataggggtctgagtcattcatgcgtttcca
ggttctcagcatatgtttgctgagtgggtttttgctgtaaacaacatgaa
gcattcattcattctgccagtatgtttgaagagtgtctgctgtatgacag
gtgctattctagactgaagtggaagtgtctggttcctttggagactcggt
tctgtcatgagatgtttttttgaaaactgtcttatgagaggatgtcttgc
tgaggcagacatatgggaggatgttttgctgagaacagacatgtggtgtt
tctctggaaagggcatgtgatgttttgttggagcggacacttgagaggat
atgtgatgtttggaaagggtataaaaataacccaacagacagtggtcaat
gctatggcattggtttgccttgccactgtttgctgactttgaaaagagaa
acacaccaaagaacttttatgatattctggtggctttttgccacttcctc
aaagactcgggccaattggcagagccttgctgtttcttctggacctaatt
gcagttgctgagtcatgaatggtgtttgtgagtggatcgagctgctggtt
gctgattcgtgtgaactgaactgctgatatcctgacaactcagattgatt
caccccaaagaactatttcttaaatagatccccatctcctttatcctata
aactttccttttccacctacctctcggtgggtggatgggcttgaagggga
ggtt
gaattccttttaggtggctgccccttcctcccaagactacagcagcaggg
ccaaagatttgaaagcctaaggctaccaggtagaaatcagacaaaggggt
agaaatgtagaaagcctcgagacaaagcaatctcttaaaaaaagaaaggg
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaac
ttttagggtaaaagcatgttcctaaatataattgtttgtcttccttcctg
cccgctcttttctgttcttctgttccgtgatgcagtaagtccccagtccc
cccaactcatccctagctctccactatcgcttctctctggcaagtatatt
gaatatggcagcaggaaggagattgccttgcagagctgcttctcgcttcc
cttgtttgtggtccgagagtgattttctcacttctgtcttggtgagatgc
tactttcagaattggagtgcagaacatctctagatgtgcacttcatgttt
gctcttaatgatgcctccttgccagtggcagagttggtgtgtgaggttgg
gtgttttctataggtcttttggtctcctggtgtgaggatggtgtggcttc
tgcaaggcttaggggcaggggactgggagaaaggcagaaaagaaaaaaga
tgagtaaacactctttaaatggttttagaaatacacccatgtgacaccgt
tctctcgtccctgtcattactatgaagataactcagccatgcttatcttc
attcgatcctagtgagcctcagagtatctcctttctcatgactctgttgc
cacaagatgttcatctacttgttcttaatagcatttgatagagggacgcc
agtgtgtaatatcataggtgattcattacatcctcctcctctcttacctc
tcaacattcagggtggtttacacggggctgttaaatgtcactggacaaat
gatacccctggagacttggagactctcagaagttgattaggataacacat
tcaataggctgggcaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_92392994_92394012
seq2: B6Ng01-325C08.g_66_1083

seq1  GAATTCCTTTTAGGTGGCTGCCCCTTCCTCCCAAGACTACAGCAGCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTAGGTGGCTGCCCCTTCCTCCCAAGACTACAGCAGCAGGG  50

seq1  CCAAAGATTTGAAAGCCTAAGGCTACCAGGTAGAAATCAGACAAAGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGATTTGAAAGCCTAAGGCTACCAGGTAGAAATCAGACAAAGGGGT  100

seq1  AGAAATGTAGAAAGCCTCGAGACAAAGCAATCTCTTAAAAAAAGAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTAGAAAGCCTCGAGACAAAGCAATCTCTTAAAAAAAGAAAGGG  150

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC  200

seq1  TTTTAGGGTAAAAGCATGTTCCTAAATATAATTGTTTGTCTTCCTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGGTAAAAGCATGTTCCTAAATATAATTGTTTGTCTTCCTTCCTG  250

seq1  CCCGCTCTTTTCTGTTCTTCTGTTCCGTGATGCAGTAAGTCCCCAGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTCTTTTCTGTTCTTCTGTTCCGTGATGCAGTAAGTCCCCAGTCCC  300

seq1  CCCAACTCATCCCTAGCTCTCCACTATCGCTTCTCTCTGGCAAGTATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTCATCCCTAGCTCTCCACTATCGCTTCTCTCTGGCAAGTATATT  350

seq1  GAATATGGCAGCAGGAAGGAGATTGCCTTGCAGAGCTGCTTCTCGCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGGCAGCAGGAAGGAGATTGCCTTGCAGAGCTGCTTCTCGCTTCC  400

seq1  CTTGTTTGTGGTCCGAGAGTGATTTTCTCACTTCTGTCTTGGTGAGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTGTGGTCCGAGAGTGATTTTCTCACTTCTGTCTTGGTGAGATGC  450

seq1  TACTTTCAGAATTGGAGTGCAGAACATCTCTAGATGTGCACTTCATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCAGAATTGGAGTGCAGAACATCTCTAGATGTGCACTTCATGTTT  500

seq1  GCTCTTAATGATGCCTCCTTGCCAGTGGCAGAGTTGGTGTGTGAGGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAATGATGCCTCCTTGCCAGTGGCAGAGTTGGTGTGTGAGGTTGG  550

seq1  GTGTTTTCTATAGGTCTTTTGGTCTCCTGGTGTGAGGATGGTGTGGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCTATAGGTCTTTTGGTCTCCTGGTGTGAGGATGGTGTGGCTTC  600

seq1  TGCAAGGCTTAGGGGCAGGGGACTGGGAGAAAGGCAGAAAAGAAAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCTTAGGGGCAGGGGACTGGGAGAAAGGCAGAAAAGAAAAAAGA  650

seq1  TGAGTAAACACTCTTTAAATGGTTTTAGAAATACACCCATGTGACACCGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAACACTCTTTAAATGGTTTTAGAAATACACCCATGTGACACCGT  700

seq1  TCTCTCGTCCCTGTCATTACTATGAAGATAACTCAGCCATGCTTATCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCGTCCCTGTCATTACTATGAAGATAACTCAGCCATGCTTATCTTC  750

seq1  ATTCGATCCTAGTGAGCCTCAGAGTATCTCCTTTCTCATGACTCTGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGATCCTAGTGAGCCTCAGAGTATCTCCTTTCTCATGACTCTGTTGC  800

seq1  CACAAGATGTTCATCTACTTGTTCTTAATAGCATTTGATAGAGGGACGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGATGTTCATCTACTTGTTCTTAATAGCATTTGATAGAGGGACGCC  850

seq1  AGTGTGTAATATCATAGGTGATTCATTACATCCTCCTCCTCTCTTACCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTAATATCATAGGTGATTCATTACATCCTCCTCCTCTCTTACCTC  900

seq1  TCAACATTCAGGGTGGTTTACACGGGGCTGTTAAATGTCACTGGACAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTCAGGGTGGTTTACACGGGGCTGTTAAATGTCACTGGACAAAT  950

seq1  GATAACCCCTTGGAAGACTTGGAGACTCTCAGAAGTTGATTAGGAT-ACA  999
      ||| ||||||  | |||||||||||||||||||||||||||||||| |||
seq2  GAT-ACCCCT--GGAGACTTGGAGACTCTCAGAAGTTGATTAGGATAACA  997

seq1  CATTCAATAAGCT-GGCAGGT  1019
      ||||||||| ||| |||||||
seq2  CATTCAATAGGCTGGGCAGGT  1018