MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-326I14
Chromosome	2 (Build37)
Map Location	40,185,205 - 40,185,941
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ppia-ps2_560.1, LOC100042604, Magmas-ps
Downstream gene	LOC666531, Lrp1b, LOC100042629
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ppia-ps2_560.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606733
definition	note : peptidylprolyl isomerase A pseudogene 2_560.1 pseudo : _no_value

name	LOC100042604 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins

name	Magmas-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606732
definition	note : mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction pseudogene pseudo : _no_value

name	LOC666531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666531
definition	note : eukaryotic translation elongation factor 1 alpha 1 pseudogene pseudo : _no_value

name	Lrp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94217 MGI:2151136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042629 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100042604 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249304 GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins product : similar to vacuolar H+ ATPase G1 transcript_id : XM_001479550.1

name	Lrp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16519538 GeneID:94217 MGI:2151136
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein-related protein 1B (deleted in tumors) transcript_id : NM_053011.1

name	LOC100042629 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249306 GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100042629 transcript_id : XM_001479594.1

name	LOC100042604 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249305 GeneID:100042604
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479600.1

name	Lrp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16519539 GeneID:94217 MGI:2151136
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005041 - low-density lipoprotein receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : low density lipoprotein receptor related protein LRP1B/LRP-DIT product : low density lipoprotein-related protein 1B protein_id : NP_443737.1

name	LOC100042629 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249307 GeneID:100042629
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479644.1

clone name	MSMg01-452B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-150J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-326I14.b	B6Ng01-326I14.g
ACC	GA114323	GA114324
length	1,230	1,148
definition	B6Ng01-326I14.b	B6Ng01-326I14.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcttcccccacctgatagtcaatcagcttatgtgccaaaaaacggg tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa gccctaagggcgttttttctattagtaaaggagataggatagctcagctg ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa atgatagacctaagctccgccttaagatcaacggaaaagagtttgaaggc atccttgataccggagcagataaaagtataatctctacacattggtggcc caaagcatggcccaccacagagtcatctcattcattacagggcctaggat atcaatcatgtcccactataagctccattgccttgacgtgggaatcctct gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa cctctggggaagggatattatgcagcatttgggccttattttgtccaatg aaaacgccccatcgggagggtattcagctaaagcaaaaaatatcctggca aagatgggttataaagaaaggaaaatggttaggacatcaagaacagggaa tgtccaatagtcctactatgttgacacaactttatgtacaagaagctctt ttgccagtgaggaacaattcccctctttaattttgctcctttacatggat gacatctcctgtgccataaagaccttaccatgctacaaggcatatccttt tctactaaaactttagtcagtgggtttacagatagccacagaaaagtcca aatttctgatacagacaatctggctctgtggtgtccagaataagattgtg ccccgaaggtagataagaaggaatcaccttcaataccttatgattccaag ctgtgtggagaaattaaatggcctccagac	gaattcaactgccaagctctaccaagacaggttaatcaagtccttcctgc tttatcatttttttgccagatatttagaagcctgaagatggatactccag ctatatagagcttactggataactgtcaatgcaggtaattgttgaagagc aatctaacttctacagctcactccatgaaacatgacctatattgtgacca aacatgtgacagtttggctaactaagaatatgagacttaatagctcaggg acctagagtaaaaccaaacactattgttctactcaaggaacataccaatg aagtgactaatgaaaatagatcatagccaccatcaatggtgccttcttcc acagcagatgggaaaaaaatgcagaactcatagccaggtaatatgcagag agtgagagaccttggatcatacagctctaaaagacatgtcttcatcaaag ctatcctcttgggtctcatggaatcatgtagaaaactaggcagaaagtgt ataaaagccagtggagatggaagacactaagaatacaaggccctctaaac acaacaagatcaatatatatattaactcacagagactgagactgaatgta tagagcctgcatgggtgaagacctacagttgaaagcagatgtggacagct gcccccatctttaactcagaaactatctccactcagtactcacaaatgaa tatttcattttttccaaggcagtctaactgaggaaacaagctactcataa aagtaggttgcatgtccaggaatataaaaataatataaactcaaggatat ctttagatattccttgtctcataatgtcctaattgggctttttattttat tttattttattttatttatttcaacagatatttattctgattatgaattt ttctttccagcatgtaatgttcttctaaatataccatctgtggacatttt tttaattaattatttttatttattttacatttcaaatattgtcacctttt ctcttttctagtctttcttcatgagccccccccacacatccctctcccct tttgtctctagaggtgctcccatcatcaccacttcttactaccctcttgc catccctccctagcatcagctccacaggaccagcatgtctcttccccc
quality values	Open. Hide. 58 42 22 26 62 62 62 62 38 62 62 62 31 22 62 62 62 62 47 62 54 62 62 47 47 62 62 48 44 59 62 62 38 49 44 62 62 59 62 59 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 45 45 54 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 54 54 46 52 58 58 58 58 58 58 54 54 54 54 58 58 58 58 54 58 58 54 58 46 54 58 58 58 58 58 51 58 51 51 58 58 58 58 53 58 51 52 58 49 58 47 49 51 54 58 42 39 58 49 50 58 51 58 49 47 46 58 58 50 58 51 52 47 54 46 54 52 51 58 52 51 53 50 58 58 58 53 52 58 58 53 32 54 53 52 51 41 58 58 58 50 58 49 51 41 58 41 32 50 52 52 53 53 54 49 39 58 58 51 41 58 43 50 52 53 53 47 32 51 51 54 54 51 50 32 58 53 54 44 46 50 49 49 49 39 53 53 51 54 54 52 30 47 39 51 53 42 49 49 46 40 35 54 41 42 42 42 52 39 37 47 54 50 46 49 28 29 49 53 31 53 32 52 51 45 52 53 40 45 37 41 37 46 32 54 46 32 53 53 37 54 47 46 54 26 41 29 42 42 44 52 52 45 39 54 54 47 35 42 35 54 53 21 21 31 32 42 34 31 32 32 39 31 34 32 30 52 53 33 53 34 31 42 32 45 32 31 53 52 46 37 31 31 53 33 31 39 42 37 53 51 28 30 21 31 51 46 31 28 37 31 19 47 46 36 20 47 45 31 26 21 30 30 25 31 42 45 33 51 36 31 31 31 46 46 46 51 33 31 31 30 28 31 32 46 31 31 28 46 31 21 25 17 31 47 17 17 25 26 29 31 46 31 15 13 46 12 31 24 31 46 46 18 5 10 25 28 37 31 27 25 31 25 18 35 32 32 35 31 30 27 19 17 29 47 25 18 33 31 41 28 36 41 26 27 32 38 33 14 15 43 33 32 36 32 33 34 34 23 30 11 27 24 16 32 16 23 17 33 48 32 20 30 32 20 18 30 15 26 29 33 30 20 31 26 21 27 48 44 31 30 15 25 28 25 23 32 36 36 13 5 10 12 5 24 10 25 23 48 48 33 8 12 14 37 34 17 18 32 43 39 22 15 18 17 9 31 11 48 33 19 31 19 28 21 26 11 23 24 19 17 9 17 43 10 13 17 12 23 10 10 13 32 13 32 20 40 24 20 23 11 13 13 23 20 11 13 19 19 24 24 20 7 6 6 5 3 3 3 10 17 16 17 13 14 27 47 40 15 13 14 24 13 28 5 30 30 11 12 21 40 13 18 7 8 17 18 13 15 22 47 5 3 17 9 12 10 5 5 27 19 10 17 20 8 7 5 3 5 21 28 28 7 3 3 10 12 12 22 9 10 23 13 12 13 16 23 9 5 17 4 11 5 12 9 11 10 5 8 8 12 6 8 11 4 7 7 21 25 6 8 11 24 24 4 8 10 19 9 11 10 9 20 8 7 12 9 4 3 20 28 3 2 3 19 10 10 5 9 4 3 3 3 5 7 11 9 4 6 15 4 9 7 4 18 8 5 5 4 1 3 4 4 6 16 3 3 5 1 5 5 5 9 3 4 15 10 7 7 7 4 12 5 11 16 18 4 4 6 6 4 5 6 4 4 7 3 7 14 8 6 7 4 3 3 4 4 5	Open. Hide. 62 59 56 43 62 59 30 62 62 62 62 59 59 39 54 62 56 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 49 54 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 49 54 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 54 58 58 58 58 58 58 41 45 35 58 58 58 58 52 58 39 58 54 58 54 58 54 58 46 41 58 54 51 58 58 58 50 58 41 47 58 51 51 58 58 58 53 58 50 58 58 51 58 58 58 50 53 53 58 58 58 51 54 58 54 58 51 51 58 58 58 58 58 54 52 49 51 51 51 35 29 48 58 58 51 33 46 48 58 58 58 51 54 58 53 53 53 58 58 58 58 58 48 58 58 51 42 49 58 49 58 53 54 58 54 50 38 23 44 51 50 49 50 51 58 54 58 58 58 58 50 52 53 42 58 30 58 52 58 54 37 41 50 53 53 58 53 49 42 34 34 44 40 50 41 51 54 39 33 49 35 51 49 41 39 54 26 33 49 42 49 52 53 53 49 50 41 38 49 52 52 39 35 42 39 54 37 37 40 44 49 44 53 53 54 47 42 39 39 54 54 39 37 51 54 54 54 54 47 37 42 35 28 39 54 31 39 37 32 53 33 33 52 36 40 38 32 16 53 53 52 40 32 32 53 45 52 33 32 31 53 40 40 52 45 49 49 51 31 42 45 18 28 28 45 42 32 31 31 46 32 30 45 30 30 31 51 46 32 31 31 31 51 51 51 45 31 31 44 31 42 30 27 47 33 30 41 30 26 26 31 51 33 30 31 31 37 35 47 43 30 21 37 31 31 23 31 38 42 31 31 38 26 32 31 31 31 31 16 29 21 46 18 31 42 31 34 39 27 28 39 46 39 31 39 46 47 46 31 33 25 46 46 30 31 31 47 47 30 31 29 46 46 31 36 28 46 46 34 34 23 47 31 32 29 47 37 30 21 18 21 21 32 38 30 31 38 48 31 33 33 38 31 30 31 31 19 33 21 33 27 44 30 22 48 48 48 38 32 31 47 29 14 32 33 25 27 29 19 19 19 26 21 24 30 10 16 30 27 23 22 31 20 37 14 20 31 29 23 24 18 18 30 32 21 19 6 12 33 23 16 19 31 48 48 47 43 43 20 16 15 13 15 13 11 18 19 23 15 34 47 40 11 14 16 34 24 22 8 40 40 17 18 28 15 27 47 23 22 27 34 22 19 16 20 26 28 10 28 16 6 12 6 32 34 9 18 3 9 10 34 34 11 13 13 28 5 4 5 5 47 10 9 3 4 14 7 7 8 13 4 3 9 16 20 26 20 27 15 9 3 3 6 21 23 18 30 11 13 15 4 9 26 28 17 12 29 21 9 9 9 10 6 7 12 22 7 21 9 17 3 5 11 10 13 25 10 3 1 3 11 17 18 5 3 8 6 5 10 5 22 6 7 6 3 2 3 19 28 9 13 9 10 5 17 3 5 10 15 13 7 5 3 1 3 5 16 5 3 2 3 9 6 9 15 10 12 3 4 5 10 6 11 7 22 5 7 6 2 2 5 4 8 4 2 4 7 5 3 4 21 29 29 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_40185205_40185941
seq2: B6Ng01-326I14.g_490_1215 (reverse)

seq1  -GGGGGAG-GACATGCTTGGTCCTGTGGAAGCTTGATGCCCTAGAGAAGG  48
       |||| || ||||||| ||||||||||| ||| |||||  |||| ||   
seq2  GGGGGAAGAGACATGC-TGGTCCTGTGG-AGC-TGATG--CTAGGGA---  42

seq1  GGGATGCCAGAGGGGTAAGGTAGGAGTGGGTGGATGGTTGGGGAGCACCC  98
      |||||| || || ||  ||  || |||||   |||| |  ||||||| ||
seq2  GGGATGGCA-AGAGGGTAGTAAGAAGTGG--TGATGAT--GGGAGCA-CC  86

seq1  TCTTAGAGACAAAGGGGAGGAGGGATGTTGTGGGGGGGCTCATGGAGGAA  148
      || |||||||||| |||  |||||||||   |||||||||||| || |||
seq2  TC-TAGAGACAAAAGGGGAGAGGGATGTGTGGGGGGGGCTCAT-GAAGAA  134

seq1  AGAACTAG-AAAGAGGAAAGGTGACAATATTTGAAATGT-AAATAAAT-A  195
      || ||||| |||||| ||||||||||||||||||||||| |||||||| |
seq2  AG-ACTAGAAAAGAGAAAAGGTGACAATATTTGAAATGTAAAATAAATAA  183

seq1  AAATAATTAATT-AAAAAATGTCCACAGATGGTATATTTAGAAGAACATT  244
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAATAATTAATTAAAAAAATGTCCACAGATGGTATATTTAGAAGAACATT  233

seq1  ACATGCTGGAAAGAAAAATTCATAATCAGAATAAATATCTGTTGAAATAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGGAAAGAAAAATTCATAATCAGAATAAATATCTGTTGAAATAA  283

seq1  ATAAAATAAAATAAAATAAAATAAAAAGCCCAATTAGGACATTATGAGAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATAAAATAAAATAAAAAGCCCAATTAGGACATTATGAGAC  333

seq1  AAGGAATATCTAAAGATATCCTTGAGTTTATATTATTTTTATATTCCTGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATATCTAAAGATATCCTTGAGTTTATATTATTTTTATATTCCTGG  383

seq1  ACATGCAACCTACTTTTATGAGTAGCTTGTTTCCTCAGTTAGACTGCCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAACCTACTTTTATGAGTAGCTTGTTTCCTCAGTTAGACTGCCTT  433

seq1  GGAAAAAATGAAATATTCATTTGTGAGTACTGAGTGGAGATAGTTTCTGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAATGAAATATTCATTTGTGAGTACTGAGTGGAGATAGTTTCTGA  483

seq1  GTTAAAGATGGGGGCAGCTGTCCACATCTGCTTTCAACTGTAGGTCTTCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGATGGGGGCAGCTGTCCACATCTGCTTTCAACTGTAGGTCTTCA  533

seq1  CCCATGCAGGCTCTATACATTCAGTCTCAGTCTCTGTGAGTTAATATATA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCAGGCTCTATACATTCAGTCTCAGTCTCTGTGAGTTAATATATA  583

seq1  TATTGATCTTGTTGTGTTTAGAGGGCCTTGTATTCTTAGTGTCTTCCATC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATCTTGTTGTGTTTAGAGGGCCTTGTATTCTTAGTGTCTTCCATC  633

seq1  TCCACTGGCTTTTATACACTTTCTGCCTAGTTTTCTACATGATTCCATGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGGCTTTTATACACTTTCTGCCTAGTTTTCTACATGATTCCATGA  683

seq1  GACCCAAGAGGATAGCTTTGATGAAGACATGTCTTTTAGAGCT  737
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAAGAGGATAGCTTTGATGAAGACATGTCTTTTAGAGCT  726

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information