BAC Information

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BAC

Clone NameB6Ng01-326I22
Chromosome2 (Build37)
Map Location 79,741,021 - 79,742,181
singlet/doubletsinglet
Overlap genePde1a
Upstream geneUbe2e3, LOC100040526, Itga4, Cerkl, Neurod1, Ssfa2, Ppp1r1c
Downstream geneLOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326I22.bB6Ng01-326I22.g
ACCGA114337GA114338
length1,164962
definitionB6Ng01-326I22.b B6Ng01-326I22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaggggtctctgggatactcggtctcagaaatgacccaggca
gaggggatgtcaagtgggtgtgtcatcacccttgtaggcatggcttgaag
aggattgaatcacaacatatttcagaagaggggcatgtccatgagtgtgg
ttcacagaaatacaagagcttcaaagtcagatcaaactggccttggcact
tcctggctgtgggaccccataggtgctgtgtactgcgttcctcctgctga
tatgggattaaggacagatctatttgtgcaaaacctggcttacaaaaaaa
aaaaaaaaagaatgaaaagcctacaagactttcttgcagaaggaagatac
acctgtgtgctgcatgtcccacgtgtaaaatggagttttgagccagcagc
ttgctcaggcagactctcactccagcacacacaacactgcaatcacacct
ggggcatggggcagggcagtcccaggaagccagataccaagacaggaaag
ttgtttttagtttgttagttactgtatcaattttttcaatttctcagact
ttaagatcttaaatcactttcttctttttctttttgttatttaaacacac
gctaaaacatctttctaatgcataatagaagcataagaaggtatgtatat
tcttggaatagtgacatttcaaagtgtaattcgagaaccaagtaacttaa
agcttgaaggcaaagctcgtacactcatgtgtacagcttggtattgactt
tagcacaagtcagatgtcatgtgactctatggtgactcgagacttggtgg
ctttacacttaacagatgcttaacgtcatttccatattgtaacatgtagg
ccgaaggaaagacctgctctcatttttctcccaggcactggaaggaaagt
aaatctacgtgatcactttacaaagaaaaataattgaaattctttcacct
tgagtgtcactatgacagctgcaggatatgtcaaaccaaccatgtgatag
ttcttcctgtacatcctaaaagagaacaaatggagggcatgttgtaacat
ttcatctgcacttttcagctgaatctccaaatacaggaaaggacagctct
tgtttcttccacctgcattcccactgtgtgacagtgcataataacaccca
atgttttctttggg
gaattccaggaaaacacaaccaaaccggtgaaggaattgaacaaaaacat
ccaggatctaaaaatggaataaagaaatcacaaagggagacaagtctgga
gatagaaaacctaggaaagaaatcaggagccatagatgcaagcatcacca
acagaatacaagacatagaagagagaatctcaggtgcagaatattccata
gaaaacattgacccaacagtcaaagaaaataaaaaatgcaaaagatccta
gagccaggcatggtggcatgcacctttaatcccagcactcaggaggcaga
ggcaggtggatttctgagttcgaggccagcctgatctacaaagtgagttc
caggacagccccagctatacagagaaaccctgtctcgaaaaaccaaaaaa
ggaaaaaaaaaaaaaaaaaaaaaaagatcctaacccccaaacatccagga
aatctaggaaacaatgagaaaaccaaacctaaggataacaggtatagatg
agaaggaagattttcaatttaaagggccagtaaatatcttcaacaaaagt
atagaagaaaacttccctaacctaaagaaagagatgcccatgaacataca
agaagcctacagaacaccaaatagtttagatcagaaaagaaattcctcct
gtcacatagtaatcaaaacaccaaatgcacaaaacaaagaaagaatatta
aaagcagtaagggaaaaaggtcaagtaacatataaaggtaaacttatcag
aattacaccagacttctcaccagagactatgaaagccagaagatcctgga
cagatgtcataaagaccctaagagaacacaaatgccagcccaggctacta
tacccaacaaaactctcaattaccgtaaatagagaaaccaaagtactcca
tgacaaaacccaaatttacacagtattttttccacaaatccagccctttc
aaggataataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_79741021_79742181
seq2: B6Ng01-326I22.b_46_1209

seq1  GAATTCAGCAGGGGTCTCTGGGATACTCGGTCTCAGAAATGACCCAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGGGGTCTCTGGGATACTCGGTCTCAGAAATGACCCAGGCA  50

seq1  GAGGGGATGTCAAGTGGGTGTGTCATCACCCTTGTAGGCATGGCTTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGATGTCAAGTGGGTGTGTCATCACCCTTGTAGGCATGGCTTGAAG  100

seq1  AGGATTGAATCACAACATATTTCAGAAGAGGGGCATGTCCATGAGTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGAATCACAACATATTTCAGAAGAGGGGCATGTCCATGAGTGTGG  150

seq1  TTCACAGAAATACAAGAGCTTCAAAGTCAGATCAAACTGGCCTTGGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGAAATACAAGAGCTTCAAAGTCAGATCAAACTGGCCTTGGCACT  200

seq1  TCCTGGCTGTGGGACCCCATAGGTGCTGTGTACTGCGTTCCTCCTGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTGTGGGACCCCATAGGTGCTGTGTACTGCGTTCCTCCTGCTGA  250

seq1  TATGGGATTAAGGACAGATCTATTTGTGCAAAACCTGGCTTACAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGATTAAGGACAGATCTATTTGTGCAAAACCTGGCTTACAAAAAAA  300

seq1  AAAAAAAAAGAATGAAAAGCCTACAAGACTTTCTTGCAGAAGGAAGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAATGAAAAGCCTACAAGACTTTCTTGCAGAAGGAAGATAC  350

seq1  ACCTGTGTGCTGCATGTCCCACGTGTAAAATGGAGTTTTGAGCCAGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGTGCTGCATGTCCCACGTGTAAAATGGAGTTTTGAGCCAGCAGC  400

seq1  TTGCTCAGGCAGACTCTCACTCCAGCACACACAACACTGCAATCACACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAGGCAGACTCTCACTCCAGCACACACAACACTGCAATCACACCT  450

seq1  GGGGCATGGGGCAGGGCAGTCCCAGGAAGCCAGATACCAAGACAGGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATGGGGCAGGGCAGTCCCAGGAAGCCAGATACCAAGACAGGAAAG  500

seq1  TTGTTTTTAGTTTGTTAGTTACTGTATCAATTTTTTCAATTTCTCAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTAGTTTGTTAGTTACTGTATCAATTTTTTCAATTTCTCAGACT  550

seq1  TTAAGATCTTAAATCACTTTCTTCTTTTTCTTTTTGTTATTTAAACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCTTAAATCACTTTCTTCTTTTTCTTTTTGTTATTTAAACACAC  600

seq1  GCTAAAACATCTTTCTAATGCATAATAGAAGCATAAGAAGGTATGTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAACATCTTTCTAATGCATAATAGAAGCATAAGAAGGTATGTATAT  650

seq1  TCTTGGAATAGTGACATTTCAAAGTGTAATTCGAGAACCAAGTAACTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAATAGTGACATTTCAAAGTGTAATTCGAGAACCAAGTAACTTAA  700

seq1  AGCTTGAAGGCAAAGCTCGTACACTCATGTGTACAGCTTGGTATTGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAAGGCAAAGCTCGTACACTCATGTGTACAGCTTGGTATTGACTT  750

seq1  TAGCACAAGTCAGATGTCATGTGACTCTATGGTGACTCGAGACTTGGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAAGTCAGATGTCATGTGACTCTATGGTGACTCGAGACTTGGTGG  800

seq1  CTTTACACTTAACAGATGCTTAACGTCATTTCCATATTGTAACATGTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACACTTAACAGATGCTTAACGTCATTTCCATATTGTAACATGTAGG  850

seq1  CCGAAGGAAAGACCTGCTCTCATTTTTCTCCCAGGCACTGGAAGGAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGGAAAGACCTGCTCTCATTTTTCTCCCAGGCACTGGAAGGAAAGT  900

seq1  AAATCTACGTGATCACTTTACAAAGAAAAATAATTGAAATTCTTTCACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTACGTGATCACTTTACAAAGAAAAATAATTGAAATTCTTTCACCT  950

seq1  TGAGTGTCACTATGACAGCTGCAGGATATGTCAAACCAACCATGTGATAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCACTATGACAGCTGCAGGATATGTCAAACCAACCATGTGATAG  1000

seq1  TTCTTCCTGTACATCCTAAAAGAG-ACAAAATGAGGGCATG-TGTAACA-  1047
      |||||||||||||||||||||||| |||||  ||||||||| ||||||| 
seq2  TTCTTCCTGTACATCCTAAAAGAGAACAAATGGAGGGCATGTTGTAACAT  1050

seq1  TTCATCTGCAC-TTTCAGCTG-ATCTCCCAAATACCAGGAAAGGACAGCT  1095
      ||||||||||| ||||||||| |||| ||||||| |||||||||||||||
seq2  TTCATCTGCACTTTTCAGCTGAATCT-CCAAATA-CAGGAAAGGACAGCT  1098

seq1  CTTGGTTTCTTCACCCTGCATCCCCAC--TGTGACAGTGGCAATAATAAC  1143
      ||| ||||||||  ||||||| |||||  ||||||||||   ||||||||
seq2  CTT-GTTTCTTCCACCTGCATTCCCACTGTGTGACAGTG--CATAATAAC  1145

seq1  CACCATTG-TTTCTTTGGG  1161
        ||| || ||||||||||
seq2  ACCCAATGTTTTCTTTGGG  1164