BAC Information

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BAC

Clone NameB6Ng01-326K14
Chromosome2 (Build37)
Map Location 127,459,313 - 127,603,690
singlet/doubletdoublet
Overlap geneMal, LOC668892, Mall, Nphp1
Upstream geneGabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5
Downstream gene1500011K16Rik, Bub1, Acoxl, Bcl2l11, LOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326K14.bB6Ng01-326K14.g
ACCGA114415GA114416
length1,1861,156
definitionB6Ng01-326K14.b B6Ng01-326K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,459,313 - 127,460,512)(127,602,537 - 127,603,690)
sequence
gaattcagataccagtatggctgggataaccaaagtccttctgaatgtgc
cagtgagatccaatttggggctgatgatgggatctggtagaagagtgctt
acccagcatgcaaaccccctgggttccatcctgagaaccaacatagaaaa
atccccaaatctaatttagttgtaggtctcaatctcctactttgttggag
aataaaacatcagctagtgaaagctgactgaggctagaatcctgaatctc
ctggtggctggcaggacatccctgcatctgggactccatctctaggatgt
cactcagttctttaaagtgtggggacaaagtgagatctcctagcagaacg
tctgactttgcagattctccatgtccttcctaattatactttcttctttc
aggtcagacatccctcacctggagtgtggcagccagagatagccattgcc
tctcactttgctctagagtcaggtccctttctcccacaaggagtggtctg
agaacatgtccaaacacatcaagagactgcagacacccggacattttaga
tcagccttaagaatagaaagaatgcccacacctagtttcctcagagcttg
agaagactctaattcagcagactgttgtgccttgaaagacaaaggcagag
ctctacgggatgtgtctacaagggagacgctatcctggtggacactgttg
tgagggtggcgtcctcagtgagtcactttgggaaagactggcccagcaca
cacatctgaactgtcccttgagaatcaggttaatcaaaggactctgcagg
aagaaagttgaacaggaaggtgtccctggtcctcaagaatgaaagacatc
cctccagttccccacctgaagcatgagacacaaaagtatttaatgaagca
tttcaagggagctcatcttccactgtgaacgtccggagacctctgttggt
gaatttcagtgcctgtgacacccagactattcacaaagactaagacatgc
aggggatgagtgctcaaagagcctttaaaaatccagaggcaaattctaga
catacttcagggtcagtgtaaatcgtcatttcttcagatcaaggttccag
tccaacgactgtccggtcaagggccaaaaggtcctttcaagaacacctcc
tttccctcgttagcctgagttaaatataggcaagcc
gaattccgaatcggtgaactataaactctccaaggtaaatgtattctcac
attggtaattaatgtttccttacaacatttatttatttattttacatata
tttcttggctttgttttgctttgttttgtttgtttaagacaggatcttac
tctgtagctctggctgtcctatatagaccagagtgccctcaaactcacag
tgatccacctgcctctgcctcctgagtgctgggattaaaagtgtgcacca
caatacctggcttcttttattttttttaaatatatttttatgggtatgaa
tgtgtgcctatctgattctatgtgcccctcatgcctgcagtgccctcagg
gaccagaagaagtcattagatcccttagaactggagttataatgagctgt
ctcatacgtgctgtgaatctagcctgtgtcttccactggagcagtaagca
ctcttggtcactgagccatcgctccggccctgatgttatccttttacatt
aaatacatttatggaatctggggtagatttcccaatgaaacagctgccta
ttctcccacaggctgatgaagctgcacctgtggggaactatgagcagagg
aaggaggaggaacacagccttctggagaagctagcctgccagctgcagga
gcttgccgtgagcatcagcaggaaagacgctctcaagtaagctcccttct
tctctcaggcctgtggcagcacctttgaaacttggttcagaatagagaca
taccaaagtgtagtctctgctctcagaccatactctagcgggggcaatag
actagagatctgaagagctaataaaccagagatagaaaatacacatgctg
ccttggaaagcgaatcacaaaagaagtgatttgggctgtccacgtacatc
atttcctctttcagagaacataaatggtgggaacattgaaagcagagaca
tgcactttgttttgtgttgctagaaaagaacattaataatgttttttcaa
ttatagaagcagacccccttgtagtattgaataaactcagtttggtggag
aggagaaagatcattattgagactcttcaaatggaatttctgcttgttta
gaacggtcctgcctgtgtagcctcaggctggcttggatgttaggtctccc
tcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_127459313_127460512
seq2: B6Ng01-326K14.b_51_1236

seq1  GAATTCAGATACCAGTATGGCTGGGATAACCAAAGTCCTTCTGAATGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATACCAGTATGGCTGGGATAACCAAAGTCCTTCTGAATGTGC  50

seq1  CAGTGAGATCCAATTTGGGGCTGATGATGGGATCTGGTAGAAGAGTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGATCCAATTTGGGGCTGATGATGGGATCTGGTAGAAGAGTGCTT  100

seq1  ACCCAGCATGCAAACCCCCTGGGTTCCATCCTGAGAACCAACATAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCATGCAAACCCCCTGGGTTCCATCCTGAGAACCAACATAGAAAA  150

seq1  ATCCCCAAATCTAATTTAGTTGTAGGTCTCAATCTCCTACTTTGTTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAAATCTAATTTAGTTGTAGGTCTCAATCTCCTACTTTGTTGGAG  200

seq1  AATAAAACATCAGCTAGTGAAAGCTGACTGAGGCTAGAATCCTGAATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACATCAGCTAGTGAAAGCTGACTGAGGCTAGAATCCTGAATCTC  250

seq1  CTGGTGGCTGGCAGGACATCCCTGCATCTGGGACTCCATCTCTAGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGCTGGCAGGACATCCCTGCATCTGGGACTCCATCTCTAGGATGT  300

seq1  CACTCAGTTCTTTAAAGTGTGGGGACAAAGTGAGATCTCCTAGCAGAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGTTCTTTAAAGTGTGGGGACAAAGTGAGATCTCCTAGCAGAACG  350

seq1  TCTGACTTTGCAGATTCTCCATGTCCTTCCTAATTATACTTTCTTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTTGCAGATTCTCCATGTCCTTCCTAATTATACTTTCTTCTTTC  400

seq1  AGGTCAGACATCCCTCACCTGGAGTGTGGCAGCCAGAGATAGCCATTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGACATCCCTCACCTGGAGTGTGGCAGCCAGAGATAGCCATTGCC  450

seq1  TCTCACTTTGCTCTAGAGTCAGGTCCCTTTCTCCCACAAGGAGTGGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTTGCTCTAGAGTCAGGTCCCTTTCTCCCACAAGGAGTGGTCTG  500

seq1  AGAACATGTCCAAACACATCAAGAGACTGCAGACACCCGGACATTTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGTCCAAACACATCAAGAGACTGCAGACACCCGGACATTTTAGA  550

seq1  TCAGCCTTAAGAATAGAAAGAATGCCCACACCTAGTTTCCTCAGAGCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTAAGAATAGAAAGAATGCCCACACCTAGTTTCCTCAGAGCTTG  600

seq1  AGAAGACTCTAATTCAGCAGACTGTTGTGCCTTGAAAGACAAAGGCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACTCTAATTCAGCAGACTGTTGTGCCTTGAAAGACAAAGGCAGAG  650

seq1  CTCTACGGGATGTGTCTACAAGGGAGACGCTATCCTGGTGGACACTGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACGGGATGTGTCTACAAGGGAGACGCTATCCTGGTGGACACTGTTG  700

seq1  TGAGGGTGGCGTCCTCAGTGAGTCACTTTGGGAAAGACTGGCCCAGCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGGCGTCCTCAGTGAGTCACTTTGGGAAAGACTGGCCCAGCACA  750

seq1  CACATCTGAACTGTCCCTTGAGAATCAGGTTAATCAAAGGACTCTGCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGAACTGTCCCTTGAGAATCAGGTTAATCAAAGGACTCTGCAGG  800

seq1  AAGAAAGTTGAACAGGAAGGTGTCCCTGGTCCTCAAGAATGAAAGACATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTTGAACAGGAAGGTGTCCCTGGTCCTCAAGAATGAAAGACATC  850

seq1  CCTCCAGTTCCCCACCTGAAGCATGAGACACAAAAGTATTTAATGAAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGTTCCCCACCTGAAGCATGAGACACAAAAGTATTTAATGAAGCA  900

seq1  TTTCAAAGGAGCTCATCTTCCACTGTGAACGTCCGGAGACCTCTGTTGGG  950
      |||||| |||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTCAAGGGAGCTCATCTTCCACTGTGAACGTCCGGAGACCTCTGTT-GG  949

seq1  TGAATTTCAGTGCCTGTGACACCCAGACTATTCACAAAGACTAAGACATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCAGTGCCTGTGACACCCAGACTATTCACAAAGACTAAGACATG  999

seq1  CCAGGGGATGAGTGCTCAAAAGAGCCCTTAAAAAATTCCAAGAGGCAAAT  1050
       |||||||||||||||| |||||||| |||||||  ||| ||||||||||
seq2  -CAGGGGATGAGTGCTC-AAAGAGCCTTTAAAAA--TCC-AGAGGCAAAT  1044

seq1  TCTTAGGACATACTTCAAGGGTCAAGTGTAAATCGTCATTTCTTCAGATC  1100
      |||   |||||||||| |||||| ||||||||||||||||||||||||||
seq2  TCT--AGACATACTTC-AGGGTC-AGTGTAAATCGTCATTTCTTCAGATC  1090

seq1  AAGGTTCCCAGTTCCCACCAACTGTCCCGGTCAAGGGCAAAAAGGTCCCC  1150
      |||||| |||||  ||| | ||||| |||||||||||| |||||||  ||
seq2  AAGGTT-CCAGT--CCAACGACTGT-CCGGTCAAGGGCCAAAAGGT--CC  1134

seq1  TTCCAAG-ACAACTCC-TTCCTCCCTTAGCTAGAAGTTAAATATA-GCAA  1197
      || |||| ||| |||| ||||  | |||||  | ||||||||||| ||||
seq2  TTTCAAGAACACCTCCTTTCCCTCGTTAGCCTG-AGTTAAATATAGGCAA  1183

seq1  GCC  1200
      |||
seq2  GCC  1186

seq1: chr2_127602537_127603690
seq2: B6Ng01-326K14.g_67_1222 (reverse)

seq1  TGCTGAGGGGGAGGACTACACATCCAAGCCCAGCCTGA-GCTACACA-GC  48
      ||||||  |||||  ||| ||||||||| ||||||||| |||||||| ||
seq2  TGCTGA--GGGAGACCTA-ACATCCAAG-CCAGCCTGAGGCTACACAGGC  46

seq1  AAGACCCTGTCTAAACAAGCAG-AATACCATTTGAAGAGTCTCAATAATT  97
      | |||| | ||||||||||||| ||| ||||||||||||||||||||| |
seq2  AGGACCGT-TCTAAACAAGCAGAAATTCCATTTGAAGAGTCTCAATAA-T  94

seq1  GATCTTTCT-CTCTCCA-CAAACTGAATTTATTCATAACTAC-AGGGGGT  144
      ||||||||| ||||||| |||||||| ||||||||  ||||| |||||||
seq2  GATCTTTCTCCTCTCCACCAAACTGAGTTTATTCAATACTACAAGGGGGT  144

seq1  CTGC-TCTATAATTTGAAAAAACATTATTAATGTTC-TTTCTAGCAACAA  192
      |||| ||||||| ||||||||||||||||||||||| ||||||||||| |
seq2  CTGCTTCTATAA-TTGAAAAAACATTATTAATGTTCTTTTCTAGCAAC-A  192

seq1  CAAAACAAAGTGCATGTCTCTGCTTTCAATGTTCCCA-CATTTATGTTCT  241
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAAAACAAAGTGCATGTCTCTGCTTTCAATGTTCCCACCATTTATGTTCT  242

seq1  CTGAAAGAGGAAATGATGTACGTGGACAGCCCAAATCACTTCTTTTGTGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAGGAAATGATGTACGTGGACAGCCCAAATCACTTCTTTTGTGA  292

seq1  TTCGC-TTCCAAGGCAGCATGTGTATTTTCTATCTCTGGTTTATTAGCTC  340
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTTTCCAAGGCAGCATGTGTATTTTCTATCTCTGGTTTATTAGCTC  342

seq1  TTCAGATCTCTAGTCTATTGCCCCCGCTAGAGTATGGTCTGAGAGCAGAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATCTCTAGTCTATTGCCCCCGCTAGAGTATGGTCTGAGAGCAGAG  392

seq1  ACTACACTTTGGTATGTCTCTATTCTGAACCAAGTTTCAAAGGTGCTGCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACTTTGGTATGTCTCTATTCTGAACCAAGTTTCAAAGGTGCTGCC  442

seq1  ACAGGCCTGAGAGAAGAAGGGAGCTTACTTGAGAGCGTCTTTCCTGCTGA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCTGAGAGAAGAAGGGAGCTTACTTGAGAGCGTCTTTCCTGCTGA  492

seq1  TGCTCACGGCAAGCTCCTGCAGCTGGCAGGCTAGCTTCTCCAGAAGGCTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACGGCAAGCTCCTGCAGCTGGCAGGCTAGCTTCTCCAGAAGGCTG  542

seq1  TGTTCCTCCTCCTTCCTCTGCTCATAGTTCCCCACAGGTGCAGCTTCATC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCCTCCTTCCTCTGCTCATAGTTCCCCACAGGTGCAGCTTCATC  592

seq1  AGCCTGTGGGAGAATAGGCAGCTGTTTCATTGGGAAATCTACCCCAGATT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTGGGAGAATAGGCAGCTGTTTCATTGGGAAATCTACCCCAGATT  642

seq1  CCATAAATGTATTTAATGTAAAAGGATAACATCAGGGCCGGAGCGATGGC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAATGTATTTAATGTAAAAGGATAACATCAGGGCCGGAGCGATGGC  692

seq1  TCAGTGACCAAGAGTGCTTACTGCTCCAGTGGAAGACACAGGCTAGATTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGACCAAGAGTGCTTACTGCTCCAGTGGAAGACACAGGCTAGATTC  742

seq1  ACAGCACGTATGAGACAGCTCATTATAACTCCAGTTCTAAGGGATCTAAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACGTATGAGACAGCTCATTATAACTCCAGTTCTAAGGGATCTAAT  792

seq1  GACTTCTTCTGGTCCCTGAGGGCACTGCAGGCATGAGGGGCACATAGAAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTCTGGTCCCTGAGGGCACTGCAGGCATGAGGGGCACATAGAAT  842

seq1  CAGATAGGCACACATTCATACCCATAAAAATATATTTAAAAAAAATAAAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGGCACACATTCATACCCATAAAAATATATTTAAAAAAAATAAAA  892

seq1  GAAGCCAGGTATTGTGGTGCACACTTTTAATCCCAGCACTCAGGAGGCAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGGTATTGTGGTGCACACTTTTAATCCCAGCACTCAGGAGGCAG  942

seq1  AGGCAGGTGGATCACTGTGAGTTTGAGGGCACTCTGGTCTATATAGGACA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTGGATCACTGTGAGTTTGAGGGCACTCTGGTCTATATAGGACA  992

seq1  GCCAGAGCTACAGAGTAAGATCCTGTCTTAAACAAACAAAACAAAGCAAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGCTACAGAGTAAGATCCTGTCTTAAACAAACAAAACAAAGCAAA  1042

seq1  ACAAAGCCAAGAAATATATGTAAAATAAATAAATAAATGTTGTAAGGAAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCAAGAAATATATGTAAAATAAATAAATAAATGTTGTAAGGAAA  1092

seq1  CATTAATTACCAATGTGAGAATACATTTACCTTGGAGAGTTTATAGTTCA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTACCAATGTGAGAATACATTTACCTTGGAGAGTTTATAGTTCA  1142

seq1  CCGATTCGGAATTC  1154
      ||||||||||||||
seq2  CCGATTCGGAATTC  1156