BAC Information

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BAC

Clone NameB6Ng01-326P11
Chromosome2 (Build37)7 (Build37)
Map Location 131,910,074 - 131,911,231150,766,964 - 150,767,322
singlet/doubletsingletsinglet
Overlap geneSlc23a2
Upstream geneSiglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24, LOC100043463, Smox, Adra1d, Lamr1-ps1, Prnp, Prnd, Rassf2
Downstream geneLOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2, Prokr2, 1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik, LOC668908
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326P11.bB6Ng01-326P11.g
ACCGA114636GA114637
length1,152957
definitionB6Ng01-326P11.b B6Ng01-326P11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(131,910,074 - 131,911,231)(150,766,964 - 150,767,322)
sequence
gaattctcatggctggtaagtggtacaaaggaatccaagccaccacgtct
atggtgagtctagtcacccagtgaagctgactagaaatgatgtctttcaa
ggtcatttccttccgggtttgcagtggccttccacttcaccacactactt
aagatgctttcttagtaacgtaggcagtaaactttttatttgtgggaaat
gctacaaccagctattatgtgctgcttggcatggcgtaatctaaaggtca
tgatgtcaccgacttggcagtttggatgaaacattcaccctgaatcatcc
atgcctctggcccatcttccagctcacagcaagtgagagactatgcaccc
agtcagacagcaccataaggacacaaccagacaaactggggtctgagtcc
atgacacctagcctggactttaaaacgttgagagacatagcaagcaaaac
actgtacaagcttaattggaccatggcttggagaggcttggggaacagct
ataacacatcttttagggacaactggggaaattaaatgtagactgcatat
tagatgatatgatggtataattattttctcaagttgataaatggcattgt
ggttactcagagactatcatcccatttagagtggaatagcatgctatctg
caacttcacttccaactggttcacaaacacaaggactcctcctcagggat
gatgaaatgtggggaaatttccaacctccctaaataacctctctgcactc
tgatagtgagggctcaacatccccagatgtaagacctggaaagtgtgctg
ccctcagggagtataccacttgtgcaagaccccactccccaccagcccac
tacatacatactacacattgccacacacaccctatggctacaagaagcta
ataaagtagaaagcagagactttctcttatgggcagtggctaatcagaac
cagatactgaactagtgtcagtggctcagcaaaggaatctgctatctgct
taagcagttgtgcctgaccacgagagcccctttgtagcccctactgcact
tctacatattgggatgaccgagtagtgagcctccctgagcagctggaagg
ttctctaaagaacaagtggggattctcttctagtccacatctgtgtagaa
aa
gaattcaggattctggaagagcagtcagtgctcttaaccactgaaccatc
tctccagcccgccttttaatagtcttttttttttttttttttcggttttt
caagacagggtttttctgtatagccctggctgtcctggaactcactttgt
agactaggctggcctcgaactcagaaatctgcctgcttctgcctcccgag
tgctgggattaaaggcatgcatcaccatgcccggctaatattcttttttt
tttttttaagatttatttattttatgtatatgagtacactgtagctgtac
agatggttgtggttgtgagccttcatgtggttgttggtaatttagtatct
ctgctcgctctggtcggccccgctcactctggcccaaagatttatttatt
attataaataagtacattgttgctgtcttcagacacaccagaagagggca
tctgatcttattacggatggttgtgagccaccatgtggttgctgggattt
gaactcaggaccttcagaggaacagtcagtgctcttacttactgagccat
ctcgccagtcctccggctaatattcttattctttgagatgttcatacaat
gtattttgataatcgtcacccccacctctccaaactctgctaagatccac
cccacctccttacacccctccaaattcatgtcctgttggaaaaaaaaaaa
aaaaaacccttaatgtaaccccttgtgttcaacctgagctgagtgtggag
acatcctagtagtagagtgtggttgacctactaaggtccacaccgacaac
gaacactgactcttccctccccttgagcccatcagctcccccacagttcc
tttattttggaagtggtggttcgagagccccctccttttccggtgctaaa
atattgacctgccctgcatgatccttggtgtggggtaagaacagctgctt
ctgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_131910074_131911231
seq2: B6Ng01-326P11.b_52_1203

seq1  GAATTCTCATGGCTGGTAAGTGGTACAAAGGAATCCAAGCCACCACGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGGCTGGTAAGTGGTACAAAGGAATCCAAGCCACCACGTCT  50

seq1  ATGGTGAGTCTAGTCACCCAGTGAAGCTGACTAGAAATGATGTCTTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAGTCTAGTCACCCAGTGAAGCTGACTAGAAATGATGTCTTTCAA  100

seq1  GGTCATTTCCTTCCGGGTTTGCAGTGGCCTTCCACTTCACCACACTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTTCCTTCCGGGTTTGCAGTGGCCTTCCACTTCACCACACTACTT  150

seq1  AAGATGCTTTCTTAGTAACGTAGGCAGTAAACTTTTTATTTGTGGGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTTTCTTAGTAACGTAGGCAGTAAACTTTTTATTTGTGGGAAAT  200

seq1  GCTACAACCAGCTATTATGTGCTGCTTGGCATGGCGTAATCTAAAGGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAACCAGCTATTATGTGCTGCTTGGCATGGCGTAATCTAAAGGTCA  250

seq1  TGATGTCACCGACTTGGCAGTTTGGATGAAACATTCACCCTGAATCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCACCGACTTGGCAGTTTGGATGAAACATTCACCCTGAATCATCC  300

seq1  ATGCCTCTGGCCCATCTTCCAGCTCACAGCAAGTGAGAGACTATGCACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTGGCCCATCTTCCAGCTCACAGCAAGTGAGAGACTATGCACCC  350

seq1  AGTCAGACAGCACCATAAGGACACAACCAGACAAACTGGGGTCTGAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGACAGCACCATAAGGACACAACCAGACAAACTGGGGTCTGAGTCC  400

seq1  ATGACACCTAGCCTGGACTTTAAAACGTTGAGAGACATAGCAAGCAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACCTAGCCTGGACTTTAAAACGTTGAGAGACATAGCAAGCAAAAC  450

seq1  ACTGTACAAGCTTAATTGGACCATGGCTTGGAGAGGCTTGGGGAACAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACAAGCTTAATTGGACCATGGCTTGGAGAGGCTTGGGGAACAGCT  500

seq1  ATAACACATCTTTTAGGGACAACTGGGGAAATTAAATGTAGACTGCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACATCTTTTAGGGACAACTGGGGAAATTAAATGTAGACTGCATAT  550

seq1  TAGATGATATGATGGTATAATTATTTTCTCAAGTTGATAAATGGCATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATATGATGGTATAATTATTTTCTCAAGTTGATAAATGGCATTGT  600

seq1  GGTTACTCAGAGACTATCATCCCATTTAGAGTGGAATAGCATGCTATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTCAGAGACTATCATCCCATTTAGAGTGGAATAGCATGCTATCTG  650

seq1  CAACTTCACTTCCAACTGGTTCACAAACACAAGGACTCCTCCTCAGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCACTTCCAACTGGTTCACAAACACAAGGACTCCTCCTCAGGGAT  700

seq1  GATGAAATGTGGGGAAATTTCCAACCTCCCTAAATAACCTCTCTGCACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATGTGGGGAAATTTCCAACCTCCCTAAATAACCTCTCTGCACTC  750

seq1  TGATAGTGAGGGCTCAACATCCCCAGATGTAAGACCTGGAAAGTGTGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTGAGGGCTCAACATCCCCAGATGTAAGACCTGGAAAGTGTGCTG  800

seq1  CCCTCAGGGAGTATACCACTTGTGCAAGACCCCACTCCCCACCAGCCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGGAGTATACCACTTGTGCAAGACCCCACTCCCCACCAGCCCAC  850

seq1  TACATACATACTACACATTGCCACACACACCCTATGGCTACAAGAAGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATACTACACATTGCCACACACACCCTATGGCTACAAGAAGCTA  900

seq1  ATAAGGTAGAAAGCAGGAGACTTTCTCTTATGGGCAGTGGCTAATCAGAA  950
      |||| |||||||||| |||||||||||||||||||||||||||||||| |
seq2  ATAAAGTAGAAAGCA-GAGACTTTCTCTTATGGGCAGTGGCTAATCAG-A  948

seq1  ACCAGATACTGAACTAGTGTCAGTGGCTCAGCAAAGGAATCTGCTATCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATACTGAACTAGTGTCAGTGGCTCAGCAAAGGAATCTGCTATCTG  998

seq1  CTTAAGCAGGTTTGTGCCTGACCACGAGAGGCCCCTTTGGTAGCCCCTAC  1050
      |||||||||  |||||||||||||||||| |||||||| |||||||||| 
seq2  CTTAAGCAG--TTGTGCCTGACCACGAGA-GCCCCTTT-GTAGCCCCTA-  1043

seq1  CTGCACTCTTACATTATTGGGGATGACCGAGTAGTGAGGCTCCTGGAGCA  1100
      |||||||  |||| |||| ||||||||||||||||||| ||||  |||||
seq2  CTGCACTTCTACA-TATT-GGGATGACCGAGTAGTGAGCCTCCCTGAGCA  1091

seq1  GGCTTGAGGGGTCCTCTAAAGA--CAGTGGGG-TTCTCTTCTAG-CCACA  1146
       ||| ||  ||| |||||||||   ||||||| ||||||||||| |||||
seq2  -GCTGGA-AGGTTCTCTAAAGAACAAGTGGGGATTCTCTTCTAGTCCACA  1139

seq1  TCTGTG-AGAAAA  1158
      |||||| ||||||
seq2  TCTGTGTAGAAAA  1152

seq1: chr7_150766964_150767322
seq2: B6Ng01-326P11.g_312_626

seq1  TTTTTTTTTTTTTTAAAGATTTATTTATTTATTTTATGCATGTGAGTACA  50
       ||||||||||||| |||    |||||||||||||||| || ||||||||
seq2  -TTTTTTTTTTTTTTAAG----ATTTATTTATTTTATGTATATGAGTACA  45

seq1  CTGTAGCTATAGAGATGGTTATGG------GCCTTCATGTGGTTGTTGGG  94
      |||||||| || |||||||| |||      ||||||||||||||||||| 
seq2  CTGTAGCTGTACAGATGGTTGTGGTTGTGAGCCTTCATGTGGTTGTTGG-  94

seq1  GATTGAATTTTTAGGACCTCTGCTAACTCCAGTCAACTCTGCTCGCTCTG  144
           |||||                    ||| | ||||||||||||||
seq2  ----TAATTT--------------------AGT-ATCTCTGCTCGCTCTG  119

seq1  GTCGGCCCCTCTTGCTCTGGTTAACTCTGCTCGCTCCAGCCCCAAAGATT  194
      ||||||||| ||  ||||||                    ||||||||||
seq2  GTCGGCCCCGCTCACTCTGG--------------------CCCAAAGATT  149

seq1  TATTTATTATTATATATAAGTACACTGTAGCTGACTACAGACATACCAGA  244
      |||||||||||||| ||||||||| ||| |||| || |||||| ||||||
seq2  TATTTATTATTATAAATAAGTACATTGTTGCTGTCTTCAGACACACCAGA  199

seq1  AGAGGGCATCAGATCTTATTACGGGTGGTTGTGAGCCACCATGTGGTTGC  294
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  AGAGGGCATCTGATCTTATTACGGATGGTTGTGAGCCACCATGTGGTTGC  249

seq1  TGGGAATTGAACTCAGGACCTT-TGAAGAGCAGTCAGTGCTCTTACCCAC  343
      ||||| ||||||||||||||||  || || ||||||||||||||||  ||
seq2  TGGGATTTGAACTCAGGACCTTCAGAGGAACAGTCAGTGCTCTTACTTAC  299

seq1  TGAGCCATCTCTCCAG  359
      ||||||||||| ||||
seq2  TGAGCCATCTCGCCAG  315