BAC Information

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BAC

Clone NameB6Ng01-327P09
Chromosome2 (Build37)
Map Location 153,583,621 - 153,584,720
singlet/doubletsinglet
Overlap geneMapre1
Upstream geneCox4i2, Bcl2l1, Tpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932
Downstream geneEG329541, LOC100043869, Spag4l, Bpil1, Bpil3, Rya3, LOC100043870, Gm1006, EG545477, Psp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327P09.bB6Ng01-327P09.g
ACCGA115351GA115352
length1,090472
definitionB6Ng01-327P09.b B6Ng01-327P09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttcaataaagctattcaaacaaaactccagtaagtggagca
gaaggaacaatgttcaaagtcacccttggctacacactgaattcaaggcc
agcctaggccagagaccctgtctcaaaaagagacctccatctttagcagg
gagtagtggctcacaacatatgcacatgttctataaatatactacaaaac
acaccatgggaaacccaacaagcccaaacctaagactctctacaaaccac
ttccccctccatcctagcccgtgtcagcagcaaagcaaactataagcagc
tctcatgctaaactccacgaaggaagccaaactcaggcacagaaagctgg
cctacagaatgatggcataatgatgcagacagcctagaagaatccctcaa
agattgagaaagctcttaagaccctaagctttagagctacctgtaactta
cttacctcttgggtgtttataaagggtcccaatttcccacgtaactaaag
ctcttgtatgtgagctagcatagggaaattctattgcaaccaacaacacc
cctttggtaaaacatcatacagtcactcacccaggccagaggcaagtgct
aacttcccactgtacagaggagggagacgtgaggacaggggtgaagaggc
tcccacagagctgcagagcacagggatgtatctgccacgtgccagagtcc
acaccctttcaaaagcacacagcaaaactctttactcagagccgcagcat
aacccatatggagcacctatgcccaagcactaccaatttttttcctttta
agaataaaaacttctggttcagtgttgaatgagtggaagtggttctgttt
acctgcagtactggagccgagaggtttcttcggtttactcaaagctgggg
cgacaagagaaggagccactgcagtttcttgaccttgtctggcagctaca
ggatcatactcttttccatcatattttgcatcaaaaaacttcttgaccat
tgaacaaattcaaatgtctgaattttccttttactatttatccacagatt
atctgcagagaaaaatcagacaattcagaccaagcagagg
aaggacagcctggtctacagagtgagttccaggacagccagagctataca
aagaaacactgtctcgaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaa
aagaaaagaaaaacctgacctcccctggagcaagaaggaatttgtcaaga
gtgaacctcagaaatgggactacagctctctctgggtgtctctgtcatct
accctaagacttctcagacctcagtaatcctgacagcaaatcctttaaga
taaaacagctctgcttggcaagagagcaaaaacctgtaatctcagccttt
gagaggtggaggcaggaggatttaagagttctaggccaccgggcatggtg
gcgcatgcctttgatcccagcactcgggaggcagaggcaggcggatttct
gagttcgaggccatcctggcctacagagtgagttccttgacagcctgggc
tatacagagaaaccctgtctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_153583621_153584720
seq2: B6Ng01-327P09.b_44_1133 (reverse)

seq1  CCTCTGCTTTGTTCTGAATGGTCTTGATTTTTCTCTGCAGATAATTCCTG  50
      ||||||| ||| ||||||| ||| |||||||||||||||||||||  |||
seq2  CCTCTGC-TTGGTCTGAATTGTC-TGATTTTTCTCTGCAGATAAT--CTG  46

seq1  TGGATAAATTAGTAAAAGGAAAATTTCAGGACAATTTTGAATTTGTTCAA  100
      |||||||| |||||||||||||| |||| ||||  |||||||||||||||
seq2  TGGATAAA-TAGTAAAAGGAAAA-TTCA-GACA--TTTGAATTTGTTCAA  91

seq1  TGGTTCAAGAAGTTTTTTGATGCAAATTATGATGGAAAAGAGTATGATCC  150
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGG-TCAAGAAGTTTTTTGATGCAAAATATGATGGAAAAGAGTATGATCC  140

seq1  TGTAGCTGCCAGACAAGGTCAAGAAACTGCAGTGGCTCCTTCTCTTGTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGCCAGACAAGGTCAAGAAACTGCAGTGGCTCCTTCTCTTGTCG  190

seq1  CCCCAGCTTTGAGTAAACCGAAGAAACCTCTCGGCTCCAGTACTGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCTTTGAGTAAACCGAAGAAACCTCTCGGCTCCAGTACTGCAGGT  240

seq1  AAACAGAACCACTTCCACTCATTCAACACTGAACCAGAAGTTTTTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAACCACTTCCACTCATTCAACACTGAACCAGAAGTTTTTATTCT  290

seq1  TAAAAGGAAAAAAATTGGTAGTGCTTGGGCATAGGTGCTCCATATGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGAAAAAAATTGGTAGTGCTTGGGCATAGGTGCTCCATATGGGTT  340

seq1  ATGCTGCGGCTCTGAGTAAAGAGTTTTGCTGTGTGCTTTTGAAAGGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCGGCTCTGAGTAAAGAGTTTTGCTGTGTGCTTTTGAAAGGGTGT  390

seq1  GGACTCTGGCACGTGGCAGATACATCCCTGTGCTCTGCAGCTCTGTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGGCACGTGGCAGATACATCCCTGTGCTCTGCAGCTCTGTGGGA  440

seq1  GCCTCTTCACCCCTGTCCTCACGTCTCCCTCCTCTGTACAGTGGGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCACCCCTGTCCTCACGTCTCCCTCCTCTGTACAGTGGGAAGTT  490

seq1  AGCACTTGCCTCTGGCCTGGGTGAGTGACTGTATGATGTTTTACCAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGCCTCTGGCCTGGGTGAGTGACTGTATGATGTTTTACCAAAGG  540

seq1  GGTGTTGTTGGTTGCAATAGAATTTCCCTATGCTAGCTCACATACAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTTGGTTGCAATAGAATTTCCCTATGCTAGCTCACATACAAGAG  590

seq1  CTTTAGTTACGTGGGAAATTGGGACCCTTTATAAACACCCAAGAGGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTACGTGGGAAATTGGGACCCTTTATAAACACCCAAGAGGTAAG  640

seq1  TAAGTTACAGGTAGCTCTAAAGCTTAGGGTCTTAAGAGCTTTCTCAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTACAGGTAGCTCTAAAGCTTAGGGTCTTAAGAGCTTTCTCAATCT  690

seq1  TTGAGGGATTCTTCTAGGCTGTCTGCATCATTATGCCATCATTCTGTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGATTCTTCTAGGCTGTCTGCATCATTATGCCATCATTCTGTAGG  740

seq1  CCAGCTTTCTGTGCCTGAGTTTGGCTTCCTTCGTGGAGTTTAGCATGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTCTGTGCCTGAGTTTGGCTTCCTTCGTGGAGTTTAGCATGAGA  790

seq1  GCTGCTTATAGTTTGCTTTGCTGCTGACACGGGCTAGGATGGAGGGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTATAGTTTGCTTTGCTGCTGACACGGGCTAGGATGGAGGGGGAA  840

seq1  GTGGTTTGTAGAGAGTCTTAGGTTTGGGCTTGTTGGGTTTCCCATGGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTGTAGAGAGTCTTAGGTTTGGGCTTGTTGGGTTTCCCATGGTGT  890

seq1  GTTTTGTAGTATATTTATAGAACATGTGCATATGTTGTGAGCCACTACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAGTATATTTATAGAACATGTGCATATGTTGTGAGCCACTACTC  940

seq1  CCTGCTAAAGATGGAGGTCTCTTTTTGAGACAGGGTCTCTGGCCTAGGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTAAAGATGGAGGTCTCTTTTTGAGACAGGGTCTCTGGCCTAGGCT  990

seq1  GGCCTTGAATTCAGTGTGTAGCCAAGGGTGACTTTGAACATTGTTCCTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGAATTCAGTGTGTAGCCAAGGGTGACTTTGAACATTGTTCCTTC  1040

seq1  TGCTCCACTTACTGGAGTTTTGTTTGAATAGCTTTATTGAAAAAGAATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCACTTACTGGAGTTTTGTTTGAATAGCTTTATTGAAAAAGAATTC  1090