BAC Information

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BAC

Clone NameB6Ng01-328B08
Chromosome2 (Build37)
Map Location 50,267,688 - 50,403,392
singlet/doubletdoublet
Overlap geneLOC666781
Upstream geneEpc2, Kif5c, 2310010M24Rik, Lypd6, 2010311D03Rik
Downstream geneLOC227885, Rnd3, LOC666802, LOC666810
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328B08.bB6Ng01-328B08.g
ACCGA115441GA115442
length1,1331,029
definitionB6Ng01-328B08.b B6Ng01-328B08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,402,255 - 50,403,392)(50,267,688 - 50,268,733)
sequence
gaattccaaatgtcatacacttgcaaaaactatctgcagctggcaaaaat
atgcccctgtcagagcacgaggcaaatgatagtgtgctactgtgaagcag
ccccatttaccacacctgggatcaaaacaaaacccaattcctgtaacatt
tttctgcttttaaagaaaccaaacttctcactacatacttgagtacacaa
agagctatggttcactcttgcatatgaactatgataggaagtttgctcta
ttattaggttgaataagtttgggcttgcttggtttttgtacagaattgta
gattgagcccaggggaagtactgtaccactgcgttattcctctagccaca
aattggattatattaaagatggtccctgttcctggagaaggaagatgttc
ttcattctctttgcaacagtggcattggaaagtccttttcattcagtggg
aagaccctgggattctatatggatacaaagaatgcacacagggagtagct
aagaaaagcattatgtactgtgtccaaaactttgtacagaatttgagaaa
atcttctccatgcccaaattttatcattaaaaactaaaattctatataaa
ataaatatttggtagatgctgtctccccttgcaaaagtaggagagagtta
tttttctgcaaataggttcttcaaattatttctaatctgttatctaaaaa
atctgtacaagttatactgtgtgaaaaagcctacaaatatagcaatcctt
tatccattcttcttgttttacagaaaacttctccccattttcaatctttt
ttagtgatttctgtcaataactatctaataaccagagaacccaagactta
tataagtgagtattaacttctaaatttatcaattatttattatttattta
tttgtttgtttgaataatcaactgagaaaactccaccaaattttaagtag
atattttcttacattaacttagccaagtaattccctaatattttcagaaa
aaaaaaaaagtaggattttttcataatgaaagatctgtatttgtagactt
caagtctctaaaaaaagaaatcatagatctgagaagtggaaagatctccc
attctcatggattggcagataataacagtaaaa

gaattcttctgatctatgctgaattttaaacgtgtttttcagatacttat
ctttaatagttgcctaaaatccaagtctagatgatcatattaatctcgtt
gacaagctgggtttattattgtctattttgaggcagtgatatcaacttct
ataataaaacatgttatctgggcacatgagcagtatatgtgaaatatgaa
attatagttatcaaagatataggcccaaatcaaagtaacattcttttcct
tttccttggtttttcaggactgtgtgtgtgagggatttcatcattcctag
attattgaccattagaacttcttaaccatgtttcctgctttccatgggag
aagaggatgagagtgtttattgcaaaaaacgccacctgatgggcaaagga
aatactgaatggggaagtgcctgaacaaaattaaggcttctgttgcctaa
tcattcaaaaaacctgagattttgttgaaattttttcttgtttcatcaac
tcaaaatgacagaaaagaggttcataatagtttgtgtgacattagagaaa
tactccctttgtcccaagcattatgtaaatctgtcatttctctttcctga
caaccccagtccatgcagctctaaagacctaggatgtgcacccgcaattt
caaggacccagtttaaccattttgcttagtcttagaatttgggggtgaat
gcaatggtgttagcttatatagctgtctctcgtgtgactacgccggggcc
tagcaaacacagaagtggatgctcacagtcagctattggatggatcatag
ggcccccaatggaggagctagagaaaatatccaaggagctgaaagggatc
tgcaaccctatgggtggaacaacgttatgaactaaccagtaccccggagc
tcttgactctagctgcatatgtatcaaaagatgggcctagtcagccatca
gtggaaagagaggcccattggacttgcaaactttgtatgcccctgtacag
ggaatgccagggccaaaaggggagtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50402255_50403392
seq2: B6Ng01-328B08.b_48_1180 (reverse)

seq1  TTTTACTGTATTAATCCTGCCAATCCATGAGAATGGGAGATCTTTCCAAC  50
      |||||||||  | || ||||||||||||||||||||||||||||||| ||
seq2  TTTTACTGTTATTAT-CTGCCAATCCATGAGAATGGGAGATCTTTCC-AC  48

seq1  TTCTCAGATCTATGATTTCTTTTTTTAGAGACTTGAAGTTCTTACAATAC  100
      |||||||||||||||||||||||||||||||||||||| |||   |||||
seq2  TTCTCAGATCTATGATTTCTTTTTTTAGAGACTTGAAG-TCTACAAATAC  97

seq1  AGATCTTTCATTATGAAAAAAATCCTACCTTTTTTTTTTTTCTGAAAATA  150
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  AGATCTTTCATTATG-AAAAAATCCTA-CTTTTTTTTTTTTCTGAAAATA  145

seq1  TTAGGGAATTACTTGGCTAAGTTAATGTAAGAAAATATCTACTTAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAATTACTTGGCTAAGTTAATGTAAGAAAATATCTACTTAAAATT  195

seq1  TGGTGGAGTTTTCTCAGTTGATTATTCAAACAAACAAATAAATAAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGTTTTCTCAGTTGATTATTCAAACAAACAAATAAATAAATAAT  245

seq1  AAATAATTGATAAATTTAGAAGTTAATACTCACTTATATAAGTCTTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTGATAAATTTAGAAGTTAATACTCACTTATATAAGTCTTGGGT  295

seq1  TCTCTGGTTATTAGATAGTTATTGACAGAAATCACTAAAAAAGATTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTATTAGATAGTTATTGACAGAAATCACTAAAAAAGATTGAAA  345

seq1  ATGGGGAGAAGTTTTCTGTAAAACAAGAAGAATGGATAAAGGATTGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAGAAGTTTTCTGTAAAACAAGAAGAATGGATAAAGGATTGCTAT  395

seq1  ATTTGTAGGCTTTTTCACACAGTATAACTTGTACAGATTTTTTAGATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAGGCTTTTTCACACAGTATAACTTGTACAGATTTTTTAGATAAC  445

seq1  AGATTAGAAATAATTTGAAGAACCTATTTGCAGAAAAATAACTCTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGAAATAATTTGAAGAACCTATTTGCAGAAAAATAACTCTCTCCT  495

seq1  ACTTTTGCAAGGGGAGACAGCATCTACCAAATATTTATTTTATATAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGCAAGGGGAGACAGCATCTACCAAATATTTATTTTATATAGAAT  545

seq1  TTTAGTTTTTAATGATAAAATTTGGGCATGGAGAAGATTTTCTCAAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTTAATGATAAAATTTGGGCATGGAGAAGATTTTCTCAAATTC  595

seq1  TGTACAAAGTTTTGGACACAGTACATAATGCTTTTCTTAGCTACTCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAAGTTTTGGACACAGTACATAATGCTTTTCTTAGCTACTCCCTG  645

seq1  TGTGCATTCTTTGTATCCATATAGAATCCCAGGGTCTTCCCACTGAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTCTTTGTATCCATATAGAATCCCAGGGTCTTCCCACTGAATGA  695

seq1  AAAGGACTTTCCAATGCCACTGTTGCAAAGAGAATGAAGAACATCTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTTTCCAATGCCACTGTTGCAAAGAGAATGAAGAACATCTTCCT  745

seq1  TCTCCAGGAACAGGGACCATCTTTAATATAATCCAATTTGTGGCTAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGGAACAGGGACCATCTTTAATATAATCCAATTTGTGGCTAGAGG  795

seq1  AATAACGCAGTGGTACAGTACTTCCCCTGGGCTCAATCTACAATTCTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACGCAGTGGTACAGTACTTCCCCTGGGCTCAATCTACAATTCTGTA  845

seq1  CAAAAACCAAGCAAGCCCAAACTTATTCAACCTAATAATAGAGCAAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACCAAGCAAGCCCAAACTTATTCAACCTAATAATAGAGCAAACTT  895

seq1  CCTATCATAGTTCATATGCAAGAGTGAACCATAGCTCTTTGTGTACTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATAGTTCATATGCAAGAGTGAACCATAGCTCTTTGTGTACTCAA  945

seq1  GTATGTAGTGAGAAGTTTGGTTTCTTTAAAAGCAGAAAAATGTTACAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAGTGAGAAGTTTGGTTTCTTTAAAAGCAGAAAAATGTTACAGGA  995

seq1  ATTGGGTTTTGTTTTGATCCCAGGTGTGGTAAATGGGGCTGCTTCACAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTTTTGTTTTGATCCCAGGTGTGGTAAATGGGGCTGCTTCACAGT  1045

seq1  AGCACACTATCATTTGCCTCGTGCTCTGACAGGGGCATATTTTTGCCAGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTATCATTTGCCTCGTGCTCTGACAGGGGCATATTTTTGCCAGC  1095

seq1  TGCAGATAGTTTTTGCAAGTGTATGACATTTGGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATAGTTTTTGCAAGTGTATGACATTTGGAATTC  1133


seq1: chr2_50267688_50268733
seq2: B6Ng01-328B08.g_67_1095

seq1  GAATTCTTCTGATCTATGCTGAATTTTAAACGTGTTTTTCAGATACTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGATCTATGCTGAATTTTAAACGTGTTTTTCAGATACTTAT  50

seq1  CTTTAATAGTTGCCTAAAATCCAAGTCTAGATGATCATATTAATCTCGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATAGTTGCCTAAAATCCAAGTCTAGATGATCATATTAATCTCGTT  100

seq1  GACAAGCTGGGTTTATTATTGTCTATTTTGAGGCAGTGATATCAACTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCTGGGTTTATTATTGTCTATTTTGAGGCAGTGATATCAACTTCT  150

seq1  ATAATAAAACATGTTATCTGGGCACATGAGCAGTATATGTGAAATATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAACATGTTATCTGGGCACATGAGCAGTATATGTGAAATATGAA  200

seq1  ATTATAGTTATCAAAGATATAGGCCCAAATCAAAGTAACATTCTTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTTATCAAAGATATAGGCCCAAATCAAAGTAACATTCTTTTCCT  250

seq1  TTTCCTTGGTTTTTCAGGACTGTGTGTGTGAGGGATTTCATCATTCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGGTTTTTCAGGACTGTGTGTGTGAGGGATTTCATCATTCCTAG  300

seq1  ATTATTGACCATTAGAACTTCTTAACCATGTTTCCTGCTTTCCATGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGACCATTAGAACTTCTTAACCATGTTTCCTGCTTTCCATGGGAG  350

seq1  AAGAGGATGAGAGTGTTTATTGCAAAAAACGCCACCTGATGGGCAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATGAGAGTGTTTATTGCAAAAAACGCCACCTGATGGGCAAAGGA  400

seq1  AATACTGAATGGGGAAGTGCCTGAACAAAATTAAGGCTTCTGTTGCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGAATGGGGAAGTGCCTGAACAAAATTAAGGCTTCTGTTGCCTAA  450

seq1  TCATTCAAAAAACCTGAGATTTTGTTGAAATTTTTTCTTGTTTCATCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAAAAAACCTGAGATTTTGTTGAAATTTTTTCTTGTTTCATCAAC  500

seq1  TCAAAATGACAGAAAAGAGGTTCATAATAGTTTGTGTGACATTAGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGACAGAAAAGAGGTTCATAATAGTTTGTGTGACATTAGAGAAA  550

seq1  TACTCCCTTTGTCCCAAGCATTATGTAAATCTGTCATTTCTCTTTCCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCTTTGTCCCAAGCATTATGTAAATCTGTCATTTCTCTTTCCTGA  600

seq1  CAACCCCAGTCCATGCAGCTCTAAAGACCTAGGATGTGCACCCGCAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCAGTCCATGCAGCTCTAAAGACCTAGGATGTGCACCCGCAATTT  650

seq1  CAAGGACCCAGTTTAACCATTTTGCTTAGTCTTAGAATTTGGGGGTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACCCAGTTTAACCATTTTGCTTAGTCTTAGAATTTGGGGGTGAAT  700

seq1  GCAATGGTGTTAGCTTATATAGCTGTCTCTCGTGTGACTACGCCGGGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGTGTTAGCTTATATAGCTGTCTCTCGTGTGACTACGCCGGGGCC  750

seq1  TAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGATCATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGATCATAG  800

seq1  GGCCCCCAATGGAGGAGCTAGAGAAAATATCCAAGGAGCTG-AAGGGATC  849
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGCCCCCAATGGAGGAGCTAGAGAAAATATCCAAGGAGCTGAAAGGGATC  850

seq1  TGCAACCCTATGGGTGGAACAACGTTATGAACTAACCAGTACCCCGGAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCCTATGGGTGGAACAACGTTATGAACTAACCAGTACCCCGGAGC  900

seq1  TCTTGACTCTAGCTGCATATGTATCAAAAGAT-GGCCTAGTCAGCCATCA  948
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTTGACTCTAGCTGCATATGTATCAAAAGATGGGCCTAGTCAGCCATCA  950

seq1  GTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTGTATGCCCCTGTACAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTGTATGCCCCTGTACA-  999

seq1  GGGAATGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAGTGGGG  1046
      |||||||||||||||||||  ||||||||||                 
seq2  GGGAATGCCAGGGCCAAAA--GGGGAGTGGGG----------------  1029


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