BAC Information

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BAC

Clone NameB6Ng01-328K19
Chromosome2 (Build37)
Map Location 95,991,166 - 95,992,115
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328K19.bB6Ng01-328K19.g
ACCGA115869GA115870
length1,248941
definitionB6Ng01-328K19.b B6Ng01-328K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagcccagggtttgatcaaggactgcctaggacattggtgaag
gccaggaggcaaagttcaattttgcttaggtatttggcaagtcatttctt
ggaggcacctataataaaacaatattgaaagaaagcacacagatccattc
actgactaatgcaaggacaagtttggagcattcgtgctatgggacgccaa
ggctccaggagcctaagtttccgtgaacatttttgcctcagaactgcgac
caagtttttggtcctgccatgcagtttttactggagtgggtgtggcagtg
ttttccttaaattctttaacagatttttgtgtatcttctttaaggacttc
tacctgtttacgtgtgttctcttggaattctttaagtgatttttgtgttt
cctttttaagggcttctatctgtttagctgtgttctcctatatttcttta
agggagttattgctttccttcttaaaattccctactagcatcatgtgtta
tgatttttgatccgaatcttgcttttctggtgtgttgtggtatctagaac
ttgctgtgttgggaatactcggttctggtgatgacaagtagtcttagttt
ctgttggtaagactcttgtgtttgcttttgccatctggcaatctctggta
ttagagattcttgctgtctctggctggagcttgttcctcctgtgagtctg
taagcctgtgtcagcactcctaggagagcagctctctcctggcaagagtg
cacagagagctgcagaacagccccacctcttgggtgaagaagtaggtcca
aaggtcccttcccagctgctctaccacgtctgtggcctgtgtgcttctaa
gtggatttggcttagagagacacttttaaaattataaaacatgctaaatg
atacttaaagtctctatcaatgaaatttaagaaaaatccactatagatca
aaatctgtccagaaaacctcagtagcaaagcagatctttgctgacataga
cataagaaaatctaatcctgggataaacatctatcaaaaaaaaactgagg
aaattatttattaagtaccctttctgatcagccttattaaaagggtcagc
agactaagcgggatcgacaaggccatgagaacgttttagcctttcctagc
gtgctggacctgatttacacactgaacttgcagctgtcaacccagtgtaa
caccttatctcagattccgatcggacaccgttgagacttatctggaat

gaattcaactcagcatccccaatgtctgcaacctccatatatgaaagcag
tcacctgtgttgaggtaaggaaagcaaaggaaagggctggagagagtgac
gatagaatcagggtgttgagagagctcaattctgatctggaatccttcaa
atgggcagtcctgggttcctatgtttttttgttgtatctgttataagtca
ccctagcaaagaatttccttgaagtcctgttgaaacaagagagaaaactc
acaatgcaatacatttcttgacttttatttatgggttaagacattattaa
gatgtataagctagtttaattcagcagccctgtctaaaatccagtgtatt
taatggcagtgtcacctgtctcattgacatttaagacattttgaagttaa
taaggtatcatttatcccacctgcttagaataggcaagaaaggaaacacc
atgctaagctatgtgacatgtgtgtagaagcctggagaggtcttgctaaa
agagaggattttggggggagtggtgttgtttcatgctaaccatttaagat
taactgcgcaaaactcagaaactttagaaactaagtccctgaaattgatt
tgtttccatgaaggaaatactttagtttgaagattgctaactactagaat
gtgtcataggcagtattagttattagaaaaattatatacaataaaagaaa
tgacatgatgccaatatacagtattttttgaatagtcagcaatagcttgc
ctgtgtaaaataaactggttcaatcaaatggtattgtgtctattgcatta
attggaatactaaataatattaaacaaaattaaatgataaacatacctca
ctataattttataccattccataatgataagaacacactagatatatggt
aaataaaggagatcctagaatgattcacttttttgtagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95991166_95992115
seq2: B6Ng01-328K19.g_64_1004

seq1  GAATTCAACTCAGCATCCCCAATGTCTGCAACCTCCATATATGAAAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCAGCATCCCCAATGTCTGCAACCTCCATATATGAAAGCAG  50

seq1  TCACCTGTGTTGAGGTAAGGAAAGCAAAGGAAAGGGCTGGAGAGAGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTGTTGAGGTAAGGAAAGCAAAGGAAAGGGCTGGAGAGAGTGAC  100

seq1  GATAGAATCAGGGTGTTGAGAGAGCTCAATTCTGATCTGGAATCCTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATCAGGGTGTTGAGAGAGCTCAATTCTGATCTGGAATCCTTCAA  150

seq1  ATGGGCAGTCCTGGGTTCCTATGTTTTTTTGTTGTATCTGTTATAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGTCCTGGGTTCCTATGTTTTTTTGTTGTATCTGTTATAAGTCA  200

seq1  CCCTAGCAAAGAATTTCCTTGAAGTCCTGTTGAAACAAGAGAGAAAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCAAAGAATTTCCTTGAAGTCCTGTTGAAACAAGAGAGAAAACTC  250

seq1  ACAATGCAATACATTTCTTGACTTTTATTTATGGGTTAAGACATTATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCAATACATTTCTTGACTTTTATTTATGGGTTAAGACATTATTAA  300

seq1  GATGTATAAGCTAGTTTAATTCAGCAGCCCTGTCTAAAATCCAGTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATAAGCTAGTTTAATTCAGCAGCCCTGTCTAAAATCCAGTGTATT  350

seq1  TAATGGCAGTGTCACCTGTCTCATTGACATTTAAGACATTTTGAAGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCAGTGTCACCTGTCTCATTGACATTTAAGACATTTTGAAGTTAA  400

seq1  TAAGGTATCATTTATCCCACCTGCTTAGAATAGGCAAGAAAGGAAACACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTATCATTTATCCCACCTGCTTAGAATAGGCAAGAAAGGAAACACC  450

seq1  ATGCTAAGCTATGTGACATGTGTGTAGAAGCCTGGAGAGGTCTTGCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAGCTATGTGACATGTGTGTAGAAGCCTGGAGAGGTCTTGCTAAA  500

seq1  AGAGAGGATTTTGGGGGGAGTGGTGTTGTTTCATGCTAACCATTTAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGATTTTGGGGGGAGTGGTGTTGTTTCATGCTAACCATTTAAGAT  550

seq1  TAACTGCGCAAAACTCAGAAACTTTAGAAACTAAGTCCCTGAAATTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCGCAAAACTCAGAAACTTTAGAAACTAAGTCCCTGAAATTGATT  600

seq1  TGTTTCCATGAAGGAAATACTTTAGTTTGAAGATTGCTAACTACTAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCATGAAGGAAATACTTTAGTTTGAAGATTGCTAACTACTAGAAT  650

seq1  GTGTCATAGGCAGTATTAGTTATTAGAAAAATTATATACAATAAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATAGGCAGTATTAGTTATTAGAAAAATTATATACAATAAAAGAAA  700

seq1  TGACATGATGCCAATATACAGTATTTTTTGAATAGTCAGCAATAGCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGATGCCAATATACAGTATTTTTTGAATAGTCAGCAATAGCTTGC  750

seq1  CTGTGTAAAATAAACTGGTTCAATCAAATGGTATTGTGTCTATTGCATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAAAATAAACTGGTTCAATCAAATGGTATTGTGTCTATTGCATTA  800

seq1  ATT-GAATACTAAATAATA-TAAACAAAATAAAATGATAAAACATACCTC  848
      ||| ||||||||||||||| |||||||||| ||||||| |||||||||||
seq2  ATTGGAATACTAAATAATATTAAACAAAATTAAATGAT-AAACATACCTC  849

seq1  ACTATTAATTTTATACCAATTCCATATTGAT-AGAACACACTAGATATAT  897
      |||| |||||||||||| |||||||| |||| ||||||||||||||||| 
seq2  ACTA-TAATTTTATACC-ATTCCATAATGATAAGAACACACTAGATATA-  896

seq1  TGGTAAATAAAAAGTAGTATCCTAGAATGATTTTCACCTATTTTTGTTAG  947
      ||||||||  |||| || ||||||||||||  |||||   |||||  |||
seq2  TGGTAAAT--AAAGGAG-ATCCTAGAATGA--TTCAC---TTTTTTGTAG  938

seq1  CTT  950
      |||
seq2  CTT  941


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