BAC Information

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BAC

Clone NameB6Ng01-329K23
Chromosome2 (Build37)
Map Location 35,886,606 - 35,993,168
singlet/doubletdoublet
Overlap geneNdufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf
Upstream geneHc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11
Downstream geneLOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329K23.bB6Ng01-329K23.g
ACCGA116577GA116578
length1,1191,159
definitionB6Ng01-329K23.b B6Ng01-329K23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,886,606 - 35,887,734)(35,992,010 - 35,993,168)
sequence
gaattctgcatcttcatctgaaggctgctagcagaatattgacttccagg
cagctaggacgagggttttaaagtccacactcatagtgacacacctactc
caacagggccacaccttgtaatagttccactccctggtccgagcatatac
aaatcatcacaccaacccctaaggtctgggactacagaggtatggcggtt
tgaataagaaatgttcattccccacaggctcaggcatttgaagcctagca
ggtggtgctgtgtggagaggttatgaggagtgcagccctgttgggagaag
tacatcactgagtttcaggctttaagagtttagatcctcacaccccttcc
agtccactctctacttcctgcatgagtttgaggatgtggtctctcagttt
cttgctatgcctctccaccacgatgaattctcacccctctgtaaccataa
gtctcatgatgtctttctcctataagcttccctggtcatggtgatttata
acagcaatggagaagtagtcaatagagaagtcggtaccacagagtggact
gtggctgaagaccccaaccatgtcgtttgttggaagagtatgaaattctt
tggaactttggaccagaaaagtggctggatactgtaagcagagcttaaca
ggccatcatagtaggatcttagcgctgagaacaaagcaggctctagaagc
ctggctccagaggtttcagaaggaagaactttaacagcagctgggctaga
gaacattcctctgatagtttggcaaagaattgatccatcttctgcccttg
tccttagaacttgcctgaggctaaattttaaaaaattcaatggactaatt
tctttggagcagaaaatttcaacatcgtacagtgtcaagcctgtggtgtg
attattactgacacttcctcctcctgctgccgctacacctccacttgctg
ctgctgtgcctctcacatgatgcaccctacatctctgaatctgaagccag
tacctgttcttcatgagctgccttggcacggtgttttatcacagcagtag
tacagtacttatcaagcacgtgctacacaccctagcctttttcattatga
ccaagaacagtgacttggg
gaattccttctctcagcagaggctgatctttgctggcaagcagctgaaag
atggccatactttgactgtaacattcaaaaggtgtgctgagacttcatgg
tggtcctgagaaaaggataaagggttatagcactgccaagaagaataaga
ataagaaggttaagttggctgtgctgaaatactataaagtggatgaaaat
gtcctcctgatcaacatggggctagagtgttcatggctagttaccttgac
agacattactgtggtgagtgttgcctgccttactgcttcaacaatccaga
agacaagtagttgtgtgtgagttaataaaaacacaggaatgagaaggaaa
aaaaaaaaaaaaagcaccaaactttgagatggcctaggcaactgtcctgc
ttctagtgcttcctaagtatgtgatcttaatctgtaaaatgtgccagagt
cacgggaatgatgaagcaccatcgaaatgacaactgtttgcccactggtc
agcagaatgatgattttaaaagccccaggcattcgactcaggcctgggtg
gaattcaaacttcatcacttgggagacgcgcgaccttggtaaagacagcg
cttgagtttttgtttcttcatcaccaccgggaataattacacctccgcgt
gtagggttgtttggaaaaggcattattcctgtcaggtgacgtcttaagca
tcaggaactatttaccaagttcccaggcaaggctctaaatgtcggctgag
tgacaatggccccgccccacccttgtgagcatagaagtcccgcccccggc
cttaaggtccagccgaactctgctgaaccagtcacggatagtatcctagc
cctacgaggtctcctccgagagcctagaaaagtgtcaccagagctcgaat
cccgcccactccttgagagccgacccccacacacactcaaggccactcac
agctacggccgggactatagagaaacacacgcggacagcggaggtgcggg
cgtcatgacgtcacgggccagcgcggcggcgcagcgtagtgcgtccacgg
gcggcagcggcgagcggtgttccgggcagaggttaactcaggtcatcgcc
tcggactcaagcgttcgagctgctttctggcatgagcttgagggccacac
gcctctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_35886606_35887734
seq2: B6Ng01-329K23.b_46_1164

seq1  GAATTCTGCATCTTCATCTGAAGGCTGCTAGCAGAATATTGACTTCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATCTTCATCTGAAGGCTGCTAGCAGAATATTGACTTCCAGG  50

seq1  CAGCTAGGACGAGGGTTTTAAAGTCCACACTCATAGTGACACACCTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGGACGAGGGTTTTAAAGTCCACACTCATAGTGACACACCTACTC  100

seq1  CAACAGGGCCACACCTTGTAATAGTTCCACTCCCTGGTCCGAGCATATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGGCCACACCTTGTAATAGTTCCACTCCCTGGTCCGAGCATATAC  150

seq1  AAATCATCACACCAACCCCTAAGGTCTGGGACTACAGAGGTATGGCGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCACACCAACCCCTAAGGTCTGGGACTACAGAGGTATGGCGGTT  200

seq1  TGAATAAGAAATGTTCATTCCCCACAGGCTCAGGCATTTGAAGCCTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGAAATGTTCATTCCCCACAGGCTCAGGCATTTGAAGCCTAGCA  250

seq1  GGTGGTGCTGTGTGGAGAGGTTATGAGGAGTGCAGCCCTGTTGGGAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGCTGTGTGGAGAGGTTATGAGGAGTGCAGCCCTGTTGGGAGAAG  300

seq1  TACATCACTGAGTTTCAGGCTTTAAGAGTTTAGATCCTCACACCCCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCACTGAGTTTCAGGCTTTAAGAGTTTAGATCCTCACACCCCTTCC  350

seq1  AGTCCACTCTCTACTTCCTGCATGAGTTTGAGGATGTGGTCTCTCAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACTCTCTACTTCCTGCATGAGTTTGAGGATGTGGTCTCTCAGTTT  400

seq1  CTTGCTATGCCTCTCCACCACGATGAATTCTCACCCCTCTGTAACCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATGCCTCTCCACCACGATGAATTCTCACCCCTCTGTAACCATAA  450

seq1  GTCTCATGATGTCTTTCTCCTATAAGCTTCCCTGGTCATGGTGATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATGATGTCTTTCTCCTATAAGCTTCCCTGGTCATGGTGATTTATA  500

seq1  ACAGCAATGGAGAAGTAGTCAATAGAGAAGTCGGTACCACAGAGTGGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATGGAGAAGTAGTCAATAGAGAAGTCGGTACCACAGAGTGGACT  550

seq1  GTGGCTGAAGACCCCAACCATGTCGTTTGTTGGAAGAGTATGAAATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGAAGACCCCAACCATGTCGTTTGTTGGAAGAGTATGAAATTCTT  600

seq1  TGGAACTTTGGACCAGAAAAGTGGCTGGATACTGTAAGCAGAGCTTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTTGGACCAGAAAAGTGGCTGGATACTGTAAGCAGAGCTTAACA  650

seq1  GGCCATCATAGTAGGATCTTAGCGCTGAGAACAAAGCAGGCTCTAGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCATAGTAGGATCTTAGCGCTGAGAACAAAGCAGGCTCTAGAAGC  700

seq1  CTGGCTCCAGAGGTTTCAGAAGGAAGAACTTTAACAGCAGCTGGGCTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCCAGAGGTTTCAGAAGGAAGAACTTTAACAGCAGCTGGGCTAGA  750

seq1  GAACATTCCTCTGATAGTTTGGCAAAGAATTGATCCATCTTCTGCCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTCCTCTGATAGTTTGGCAAAGAATTGATCCATCTTCTGCCCTTG  800

seq1  TCCTTAGAACTTGCCTGAGGCTAAATTTTAAAAAATTCAATGGACTAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGAACTTGCCTGAGGCTAAATTTTAAAAAATTCAATGGACTAATT  850

seq1  TCTTTGGAGCAGAAAATTTCAACATCGTACAGTGTCAAGCCTGTGGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGAGCAGAAAATTTCAACATCGTACAGTGTCAAGCCTGTGGTGTG  900

seq1  ATTATTACTGACACTTCCTCCTCCTGCTGCCGCTACACCTCCACTTGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACTGACACTTCCTCCTCCTGCTGCCGCTACACCTCCACTTGCTG  950

seq1  CTGCTGTGCCTCCTCACCATGATGCACCCCTACATCTCTGAATCTGAAAG  1000
      ||||||||||| |||| ||||||||| ||||||||||||||||||| |||
seq2  CTGCTGTGCCT-CTCA-CATGATGCA-CCCTACATCTCTGAATCTG-AAG  996

seq1  CCCAAGTAACCTGTTCTTCCATGAGCTGCCTTGGCCACGGTGTTTTATCA  1050
      ||  ||| |||||||||| ||||||||||||||| |||||||||||||||
seq2  CC--AGT-ACCTGTTCTT-CATGAGCTGCCTTGG-CACGGTGTTTTATCA  1041

seq1  CAGCAGTAGTACAGTAACTAATCAAGGCACGTGCCAACACA-CCTAG-CT  1098
      ||||||||||||||| ||| ||||| ||||||| | ||||| ||||| ||
seq2  CAGCAGTAGTACAGT-ACTTATCAA-GCACGTG-CTACACACCCTAGCCT  1088

seq1  TTTTCATTATGACCAAGAACAGTGACTTGGG  1129
      |||||||||||||||||||||||||||||||
seq2  TTTTCATTATGACCAAGAACAGTGACTTGGG  1119

seq1: chr2_35992010_35993168
seq2: B6Ng01-329K23.g_66_1224 (reverse)

seq1  CTCAGAGCTGT---GCCCTC-AGCTCATGCCCCGAAAGCAGCTTCCGACG  46
      |||||||  ||   |||||| |||||||| || ||||||||| ||  |||
seq2  CTCAGAGGCGTGTGGCCCTCAAGCTCATG-CCAGAAAGCAGC-TCGAACG  48

seq1  CTGGGGTCCGAGCGAAGGACCTGAGGTTACCTCTG-CCGAAACACCGCTC  95
      || | |||||||   | |||||||| | ||||||| ||| ||||||||||
seq2  CTTGAGTCCGAGGCGATGACCTGAGTTAACCTCTGCCCGGAACACCGCTC  98

seq1  GCCGCCTGGCCGCCCGT-GACGCACTACGCCTGCGCCGCCGCGCTGGCCC  144
      |||||   ||||||||| ||||||||||| ||||||||||||||||||||
seq2  GCCGC--TGCCGCCCGTGGACGCACTACG-CTGCGCCGCCGCGCTGGCCC  145

seq1  GTGACGTCATGACGCCCGCACCTCCGCTGTCCCGCGTGTGTTTCTCTATA  194
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTGACGTCATGACGCCCGCACCTCCGCTGT-CCGCGTGTGTTTCTCTATA  194

seq1  GTCCCGGCCGTAGCTGGTGAGTGGCCTTGAGTGTGTGTGGGGGTCGGCTC  244
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTCCCGGCCGTAGCT-GTGAGTGGCCTTGAGTGTGTGTGGGGGTCGGCTC  243

seq1  TCAAGGAGTGGGCGGGATTCGAGCTCTGGTGACACTTTTCTAGGCTCTCG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAGTGGGCGGGATTCGAGCTCTGGTGACACTTTTCTAGGCTCTCG  293

seq1  GAGG-GACCTCGTAGGGCTAGGATACTATCCGTGACTGGTTCAGCAGAGT  343
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGACCTCGTAGGGCTAGGATACTATCCGTGACTGGTTCAGCAGAGT  343

seq1  TCGGCTGGACCTTAAGGCCGGGGGCGGGACTTCTATGCTCACAAGGGTGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTGGACCTTAAGGCCGGGGGCGGGACTTCTATGCTCACAAGGGTGG  393

seq1  GGCGGGGCCATTGTCACTCAGCCGACATTTAGAGCCTTGCCTGGGAACTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCCATTGTCACTCAGCCGACATTTAGAGCCTTGCCTGGGAACTT  443

seq1  GGTAAATAGTTCCTGATGCTTAAGACGTCACCTGACAGGAATAATGCCTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATAGTTCCTGATGCTTAAGACGTCACCTGACAGGAATAATGCCTT  493

seq1  TTCCAAACAACCCTACACGCGGAGGTGTAATTATTCCCGGTGGTGATGAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACAACCCTACACGCGGAGGTGTAATTATTCCCGGTGGTGATGAA  543

seq1  GAAACAAAAACTCAAGCGCTGTCTTTACCAAGGTCGCGCGTCTCCCAAGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAAACTCAAGCGCTGTCTTTACCAAGGTCGCGCGTCTCCCAAGT  593

seq1  GATGAAGTTTGAATTCCACCCAGGCCTGAGTCGAATGCCTGGGGCTTTTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGTTTGAATTCCACCCAGGCCTGAGTCGAATGCCTGGGGCTTTTA  643

seq1  AAATCATCATTCTGCTGACCAGTGGGCAAACAGTTGTCATTTCGATGGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCATTCTGCTGACCAGTGGGCAAACAGTTGTCATTTCGATGGTG  693

seq1  CTTCATCATTCCCGTGACTCTGGCACATTTTACAGATTAAGATCACATAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCATTCCCGTGACTCTGGCACATTTTACAGATTAAGATCACATAC  743

seq1  TTAGGAAGCACTAGAAGCAGGACAGTTGCCTAGGCCATCTCAAAGTTTGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAGCACTAGAAGCAGGACAGTTGCCTAGGCCATCTCAAAGTTTGG  793

seq1  TGCTTTTTTTTTTTTTTTTCCTTCTCATTCCTGTGTTTTTATTAACTCAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTTTTTTTTTTTCCTTCTCATTCCTGTGTTTTTATTAACTCAC  843

seq1  ACACAACTACTTGTCTTCTGGATTGTTGAAGCAGTAAGGCAGGCAACACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACTACTTGTCTTCTGGATTGTTGAAGCAGTAAGGCAGGCAACACT  893

seq1  CACCACAGTAATGTCTGTCAAGGTAACTAGCCATGAACACTCTAGCCCCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGTAATGTCTGTCAAGGTAACTAGCCATGAACACTCTAGCCCCA  943

seq1  TGTTGATCAGGAGGACATTTTCATCCACTTTATAGTATTTCAGCACAGCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATCAGGAGGACATTTTCATCCACTTTATAGTATTTCAGCACAGCC  993

seq1  AACTTAACCTTCTTATTCTTATTCTTCTTGGCAGTGCTATAACCCTTTAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAACCTTCTTATTCTTATTCTTCTTGGCAGTGCTATAACCCTTTAT  1043

seq1  CCTTTTCTCAGGACCACCATGAAGTCTCAGCACACCTTTTGAATGTTACA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTCAGGACCACCATGAAGTCTCAGCACACCTTTTGAATGTTACA  1093

seq1  GTCAAAGTATGGCCATCTTTCAGCTGCTTGCCAGCAAAGATCAGCCTCTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGTATGGCCATCTTTCAGCTGCTTGCCAGCAAAGATCAGCCTCTG  1143

seq1  CTGAGAGAAGGAATTC  1159
      ||||||||||||||||
seq2  CTGAGAGAAGGAATTC  1159