BAC Information

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BAC

Clone NameB6Ng01-329N20
Chromosome2 (Build37)
Map Location 174,741,282 - 174,742,186
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664880, LOC100043912, LOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757, Edn3
Downstream geneLOC545487, LOC100043760, LOC100043761, LOC620790, LOC665001, LOC100043762, LOC100043763, LOC100043764, LOC100043914, LOC100043915, LOC668009, LOC100038953, LOC620804, LOC100039000, LOC100043126, LOC100039017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329N20.bB6Ng01-329N20.g
ACCGA116709GA116710
length1,214954
definitionB6Ng01-329N20.b B6Ng01-329N20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtactgcccctggtattacactatctctttgagtaaaagttag
gtcactgcccttcacaggaatctaccatcacctaggaagaaagaagtttc
tgaccgtagtggaaaccagaatagatgcttagaattatagctgagttaca
ccgatttacaggaatttactatggtttaggaagcagatcgggctgtggtt
ttagagtattgcattattcatgagatggttagctagaacggaactcccta
gttagaaccatgacttggatgtgaaagcccttgccctaggagtgaaaagt
tctcacacctggcttctaagactatagctgaccttagatagggctgactt
tgtctcaattattttattgcccagtttcttccgatctttgcgttttcatt
cctctgttctgtgtaagaatcattaagcatccggttacctcatttgtacc
ttgcgggtatgtcacccaacttttttattgtcttctgtataaaagtctga
agctcgaattgtaaattacattcagattctacacacaacctttcctgtgt
gcatctgtctgtcattcatccacgcttttcccacccgcgtcgagagaccc
cgttccacgcagacacagggacccagagggtctgcggcagtggagcatgc
ccatggaactttaaaacaattctcaatttagcacaatcttcaatcatctg
gtaggaaagtctcaaggaggcatcatctgaatcaggttagcctttcacaa
tagctgtgggatactgtcatagttatattaattaagatgaagagaattac
cactgagatttgctccatttcctaggcaggttgtaaaagaatggagaaag
caaactgtgcactagcaaaaatgctctgagcactctctgctcttgactgt
tgataggtgtgcactctttttttttttcttttcttttttttttaagattt
atatatttaagtacactgtagctgtcttcagacactacagagacggagtc
agatctcattacggatgggttgtgagccaccatgtggttgctgggatttg
aaattcgacctctgaagagcagtcggtgctctacccactgaacccatctc
accaggccaggtggtgcactcttgtcgcaagctcttgaaccccaccacct
tatacatcatgaccattcacggaacgttgagctagaagtgaccccttcct
ttctcacaattgtc
gaattcataggacagtgcagatgggtgccctggggaggggggtctgcatt
tagtaagcatcaaacttcagtttgccaaatgagaaacttgcagaatgcgt
ttgacctctagcactgaatatttttttaagatttatgtatttaatttttt
tgtatcaaggcgtttgcctatatacatatgtgtacgacattatgtacctg
gtgcttatgggaggccagaaaagtgtgtcagatagcctggaactggagtt
atggatggttgtaagctgccctgtggatgttagcaaccgttcaggtcctc
tctataagaacagcaagtattcttaacaaccaagccatccccagatcccc
taacaaccacttcaagaactttttatttaaaatattgtttttcaggggca
gaagatattgcagaatacccagattcaggtcccacatactggctcgaaca
acctgtaatgatgacctagcctgcctccatcttaggcttggaagttctct
atagtaaagacaaagtaggttccttcctgtttatgattatttctgtttct
caagaattgagctggggctagagagatggctcagcggctatgagcactgg
ctgctcttccagaggtcctgagttcaaatcccagcaaccacatggtggct
cacaactatctgtaatgggatctgatgcactcttctggtgtctgtctgat
gacagctacagtgtactcatatatacatatatataataaataaatcgaag
aagaaggaggaggagaagaagaattggactatgccccacctgtaacccta
actacaaatggttctatactgcctgtttcaggaaaccacaactatgtctt
tgtttcaaaaggttgttatgaccactgaccaccttgtttgaccactttgt
aaccatgtctttgtttcaagaggtgtattcaccatagtaaccctgatcta
taaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_174741282_174742186
seq2: B6Ng01-329N20.g_66_969

seq1  GAATTCATAGGACAGTGCAGATGGGTGCCCTGGGGAGGGGGGTCTGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGACAGTGCAGATGGGTGCCCTGGGGAGGGGGGTCTGCATT  50

seq1  TAGTAAGCATCAAACTTCAGTTTGCCAAATGAGAAACTTGCAGAATGCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGCATCAAACTTCAGTTTGCCAAATGAGAAACTTGCAGAATGCGT  100

seq1  TTGACCTCTAGCACTGAATATTTTTTTAAGATTTATGTATTTAATTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTCTAGCACTGAATATTTTTTTAAGATTTATGTATTTAATTTTTT  150

seq1  TGTATCAAGGCGTTTGCCTATATACATATGTGTACGACATTATGTACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCAAGGCGTTTGCCTATATACATATGTGTACGACATTATGTACCTG  200

seq1  GTGCTTATGGGAGGCCAGAAAAGTGTGTCAGATAGCCTGGAACTGGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATGGGAGGCCAGAAAAGTGTGTCAGATAGCCTGGAACTGGAGTT  250

seq1  ATGGATGGTTGTAAGCTGCCCTGTGGATGTTAGCAACCGTTCAGGTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGTTGTAAGCTGCCCTGTGGATGTTAGCAACCGTTCAGGTCCTC  300

seq1  TCTATAAGAACAGCAAGTATTCTTAACAACCAAGCCATCCCCAGATCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAGAACAGCAAGTATTCTTAACAACCAAGCCATCCCCAGATCCCC  350

seq1  TAACAACCACTTCAAGAACTTTTTATTTAAAATATTGTTTTTCAGGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACCACTTCAAGAACTTTTTATTTAAAATATTGTTTTTCAGGGGCA  400

seq1  GAAGATATTGCAGAATACCCAGATTCAGGTCCCACATACTGGCTCGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATTGCAGAATACCCAGATTCAGGTCCCACATACTGGCTCGAACA  450

seq1  ACCTGTAATGATGACCTAGCCTGCCTCCATCTTAGGCTTGGAAGTTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAATGATGACCTAGCCTGCCTCCATCTTAGGCTTGGAAGTTCTCT  500

seq1  ATAGTAAAGACAAAGTAGGTTCCTTCCTGTTTATGATTATTTCTGTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAAGACAAAGTAGGTTCCTTCCTGTTTATGATTATTTCTGTTTCT  550

seq1  CAAGAATTGAGCTGGGGCTAGAGAGATGGCTCAGCGGCTATGAGCACTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTGAGCTGGGGCTAGAGAGATGGCTCAGCGGCTATGAGCACTGG  600

seq1  CTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCT  650

seq1  CACAACTATCTGTAATGGGATCTGATGCACTCTTCTGGTGTCTGTCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTATCTGTAATGGGATCTGATGCACTCTTCTGGTGTCTGTCTGAT  700

seq1  GACAGCTACAGTGTACTCATATATACATATATATAATAAATAAATCGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTACAGTGTACTCATATATACATATATATAATAAATAAATCGAAG  750

seq1  AAGAAGGAGGAGGAGAAGAAGAATTGGACTATGCCCCACCTGTAACCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAGGAGGAGAAGAAGAATTGGACTATGCCCCACCTGTAACCCTA  800

seq1  ACTACAAATGGTTCTATACTGCCTGTTTCAGGAAACCACAACTATGTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAATGGTTCTATACTGCCTGTTTCAGGAAACCACAACTATGTCTT  850

seq1  TGTTTCAAAAGGTTGTTATGACCACTGACCACCTTGTTTTGACCACTTTG  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTTTCAAAAGGTTGTTATGACCACTGACCACCTTG-TTTGACCACTTTG  899

seq1  TAACC  905
      |||||
seq2  TAACC  904