BAC Information

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BAC

Clone NameB6Ng01-330L11
Chromosome2 (Build37)
Map Location 111,000,665 - 111,001,830
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15, LOC668802, LOC623270
Downstream geneLOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330L11.bB6Ng01-330L11.g
ACCGA117292GA117293
length1,1941,124
definitionB6Ng01-330L11.b B6Ng01-330L11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgctggggagatactagctaggataagtgacgctgaaaacccg
ggaccataccatcaccaggcgctgaaaaggtgaccccccgtttcaagggg
gcagattcagaactacgggacactaaagctctgtaaggtacgttcggtct
tgaactttctccagcgttagaggccttttaaggggggcagatgatcctgg
aggaagtccaagacagtctatcagagacagagaggggagagagattagga
gttaagaggaaacaaggtgcacctaagtagaaaacaggccttttcaagga
ccttgagcctgaggaaaagagaattaagggaaaaaaatgccctgggagag
ttcagaaaaggagaagggagagagaaaaaggaagaaatataaaaagagaa
aaagaaaagaaactaaaatataaagatacaaaagataatgtaaaatataa
agatacaaaggataatataaaaaatgaagaacaaaaaaaaaatttaagtc
aatttaccctcctctcaaggactttgactaaagaggcagccttcatcaaa
ggcttaaagatagctctcagggccactgtgcctcctctcccttctctggc
agtattcccagaagaaggagataaggaagtagagtctgaacatgagagag
agagaaaataagttttagaaaagcaattattcccctgtttgggatctttt
agcaaaaaaagaggaaaaaatgaaaataagctatttcagagctctcctgg
gaacaaaaggaaaacgggagacatcctgcttcctctgtggctcctatgga
gatattcttagctctggttaggttatctgtgtccctttgagacaccaagt
tttattccctgtctgtccattttctgtttttggtgcaccaaatttccata
tgtctgtcaattcatgtttgtttttgttttgttgtttgaatgattattgt
tctgtgtttcatgttgaaaaatattaattgggttaaactttatctgctgg
ctgtccatcctttaacttgttgaaaagcagctcaatttgcacagcagaaa
agtgataaagcactgtgactgggagtcagtacagctggaaaagcctgctg
aggtccgatgcaaatgagctctaaggtcagccagcccaatagatggacac
tgtcggaaattgggagagagaatagatcctctcctgtcgtgcat
gaattcttttctttaataaatttcaaaagctctacaatccatacttagga
agaaatcgtaagaaattttaaatttttttcaaaataccgagaaacataat
tttttgaaattcacataatataaggattaaaatgatcatgataatggtgg
tttgtattgcttcatgactgctaaaggaaacgaatattaatatctcagtg
atggacagatatgattcactgaattcttaacccatgtagttatctgttaa
actttcctctggatgaatccttctagaattggcagtgtaattgttacatt
caaaaagatctttccttaataagaaattatctatactgcccactattaat
aacatactcccacattaaattctgacttaagtgtgtctgggttttcatat
gaaaaaaattctattgttttcttattattgcttgtcttttaaattcagga
tatacctatccctttacttagcaatcagtaactcactacttcttgacatt
caacaaaaacaaattacttaacattaatacacctgaaagctctacttggc
ctattcaaattctaattgctgtattccaatatcataagacttttaccatt
ttctacaatattggaaccataggtgtttgaggtgtttatggaaaatttat
gtcctcctttagtttggacacatccaaatatcaaataatgtcagaattca
gcattttttaaatttaattttcagcactgaaataagaataagttcatgtt
ttgttttgtagcaaagccctaaggatatcatgaagatatcagtcccttca
caggttgttacactcaacataatccctatattctctaggattaagaaatt
agagagaacaagccgggcgtggtggaacacgcctttaatcccagcactca
ggagcagaggcagtggatttgagttcaaggtcagcctggtctacaaagtg
agttccaggacagccagggctacacagagaaaccctgtctcgaaaaccat
aaaatataaaagaaacgaatttgaaattgagagacacgatagatgctata
gtactatcatggtactgttgtgttgacgtgaaacctcactagaatctata
cggtgattctttacagaataaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111000665_111001830
seq2: B6Ng01-330L11.g_69_1192

seq1  GAATTCTTTTCTTTAATAAATTTCAAAAGCTCTACAATCCATACTTAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTTAATAAATTTCAAAAGCTCTACAATCCATACTTAGGA  50

seq1  AGAAATCGTAAGAAATTTTAAATTTTTTTCAAAATACCGAGAAACATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCGTAAGAAATTTTAAATTTTTTTCAAAATACCGAGAAACATAAT  100

seq1  TTTTTGAAATTCACATAATATAAGGATTAAAATGATCATGATAATGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAATTCACATAATATAAGGATTAAAATGATCATGATAATGGTGG  150

seq1  TTTGTATTGCTTCATGACTGCTAAAGGAAACGAATATTAATATCTCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTGCTTCATGACTGCTAAAGGAAACGAATATTAATATCTCAGTG  200

seq1  ATGGACAGATATGATTCACTGAATTCTTAACCCATGTAGTTATCTGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGATATGATTCACTGAATTCTTAACCCATGTAGTTATCTGTTAA  250

seq1  ACTTTCCTCTGGATGAATCCTTCTAGAATTGGCAGTGTAATTGTTACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTCTGGATGAATCCTTCTAGAATTGGCAGTGTAATTGTTACATT  300

seq1  CAAAAAGATCTTTCCTTAATAAGAAATTATCTATACTGCCCACTATTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGATCTTTCCTTAATAAGAAATTATCTATACTGCCCACTATTAAT  350

seq1  AACATACTCCCACATTAAATTCTGACTTAAGTGTGTCTGGGTTTTCATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACTCCCACATTAAATTCTGACTTAAGTGTGTCTGGGTTTTCATAT  400

seq1  GAAAAAAATTCTATTGTTTTCTTATTATTGCTTGTCTTTTAAATTCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATTCTATTGTTTTCTTATTATTGCTTGTCTTTTAAATTCAGGA  450

seq1  TATACCTATCCCTTTACTTAGCAATCAGTAACTCACTACTTCTTGACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTATCCCTTTACTTAGCAATCAGTAACTCACTACTTCTTGACATT  500

seq1  CAACAAAAACAAATTACTTAACATTAATACACCTGAAAGCTCTACTTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAACAAATTACTTAACATTAATACACCTGAAAGCTCTACTTGGC  550

seq1  CTATTCAAATTCTAATTGCTGTATTCCAATATCATAAGACTTTTACCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAAATTCTAATTGCTGTATTCCAATATCATAAGACTTTTACCATT  600

seq1  TTCTACAATATTGGAACCATAGGTGTTTGAGGTGTTTATGGAAAATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAATATTGGAACCATAGGTGTTTGAGGTGTTTATGGAAAATTTAT  650

seq1  GTCCTCCTTTAGTTTGGACACATCCAAATATCAAATAATGTCAGAATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCTTTAGTTTGGACACATCCAAATATCAAATAATGTCAGAATTCA  700

seq1  GCATTTTTTAAATTTAATTTTCAGCACTGAAATAAGAATAAGTTCATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTTAAATTTAATTTTCAGCACTGAAATAAGAATAAGTTCATGTT  750

seq1  TTGTTTTGTAGCAAAGCCCTAAGGATATCATGAAGATATCAGTCCCTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTAGCAAAGCCCTAAGGATATCATGAAGATATCAGTCCCTTCA  800

seq1  CAGGTTGTTACACTCAACATAATCCCTATATTCTCTAGGATTAAGAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGTTACACTCAACATAATCCCTATATTCTCTAGGATTAAGAAATT  850

seq1  AGAGAGAACAAGCCGGGCGTGGTGGAACACGCCTTTAATCCCAGCACTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAACAAGCCGGGCGTGGTGGAACACGCCTTTAATCCCAGCACTCA  900

seq1  GGAGGCAGAGGCAGGTGGATTTGAGTTCAAGGTCAGCCTGGTCTACAAAG  950
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGA-GCAGAGGCA-GTGGATTTGAGTTCAAGGTCAGCCTGGTCTACAAAG  948

seq1  TGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAC  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCG-AAAAC  997

seq1  CAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAATTAGAAAATTAGAGAGA  1050
      || |||| | |||| |||             |||| |||| | ||||| |
seq2  CATAAAATATAAAAGAAA-----------CGAATTTGAAATTGAGAGACA  1036

seq1  ACAACAGATTAAAGATGCATAATTAAGTACTTAATCATGGTACTGTTTGT  1100
            |||   ||||||    |  ||||||  |||||||||||| ||||
seq2  -----CGAT---AGATGC----TATAGTACT--ATCATGGTACTG-TTGT  1071

seq1  TGGTTGACCGTGAAAACCCTCAACTAGGAATCAATTAAAGGGGTGATTCT  1150
        ||||| |||||||  |||| |||| ||||| ||      |||||||||
seq2  --GTTGA-CGTGAAA--CCTC-ACTA-GAATCTAT----ACGGTGATTCT  1110

seq1  TTAACAGGAATAAAAT  1166
      || ||| |||||||||
seq2  TT-ACA-GAATAAAAT  1124