BAC Information

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BAC

Clone NameB6Ng01-330M23
Chromosome2 (Build37)
Map Location 60,604,469 - 60,739,378
singlet/doubletdoublet
Overlap geneRbms1
Upstream geneTanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6
Downstream geneENSMUSG00000075325, Tank, Psmd14, Tbr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330M23.bB6Ng01-330M23.g
ACCGA117356GA117357
length1,0871,088
definitionB6Ng01-330M23.b B6Ng01-330M23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,738,296 - 60,739,378)(60,604,469 - 60,605,547)
sequence
gaattccctatgggagctgaggcgaaggcttattggggaaagtgattgcc
ttgcaggcttgagatactaggctctcccattcaaaatagtactgctctga
agcccttccactgcacgctgacccagttaagcagctggacctccaggcat
gtatgatcttaactttacacgccaagtagagcagtcatcttctcgatttg
tagtccagtcaagaggcaaaattaaagtttctaatacgatttgaagagta
cttttactaagagattaataatttctaaagaaaacagaaatttcaaatta
ctttaaggtaaacatcctgtgtatatttatcgttgccgggaattgaactt
aggtccttacacgtacaaggcaaatgctccactactgagctatatttcca
gttgcaaacatcatcttcatatttgcctttaaaatcccttttttcccggt
tactgcccacctttgcccttttagttgctcaggaagttaaaaataaataa
ataaacaccaggaaagagtccttcattattcattcctttgcattcttttt
actttttaaaatgtgcacagcggctctgaaattcattacgcaaaatcagt
tttagtttttgctgcatgtctagtcacttgtgggtgagtagacaggtgat
ataattacatccaagcgtgtgattttttttttctttttacttaaaagttt
tcaaccagaagttgtgttgacattcagtttgaaattcagttacttggctc
ttagctcatggagatccaacagttgcccattaatggcgctttcattgccc
tgcactttggaagccctaagcattcccaaatgcacttaggagcatttcca
ctcattagagaaccagtgtttctcagagctgtggctgaagggcttcctgt
gtgaaaaccaaacaaaatgggcaataagagtgccatgtgagtagaggaaa
attttgttcttaatattataaaattacaattttttttccttcgcctctac
atcaatgtaagagatcacttctgattccaggagtttacagtagtataaaa
atataagtgaatatatcacgggaggcagaatgataga
gaattctcttcggtctacgttactcagagtctactgtgtgctcggtccac
aggagcaggccgtgcagcagtccataaatcagatcttcctcagggctttt
gtgctgtgtagctgaggatatgcccactcttatgaaagcctgtttacctc
aataggacagcagacagtgaagacatgtgtgctttaataaaaatgctcca
ttgaaagacatacagatgcaagaacagctgacattccttcctgacacgac
tctattgtcttgggggcggggggcacgggtaagaaagagtccatgcttat
aaactcttcaagccttgtttactaccgagaccacccacttgctttaggaa
aatcatgtcatacaaagttggggaacttcctgattttcttggtgacaaag
ggtttaattcactgtaactaacagttctcttggcactgtgcaacccttgg
atgagtttggtcagatttttttttggtgggtaggaacaagatgtgggcca
ggtttttatattctgtttacgtgtatgcaagtctgttacagaatgggcag
cctggcttcatcagcctctctggtgcttccaggccagaccatagtgcagg
tcctttgcttgcctctggaagcccaaagcatgggttccaggctaaagagt
caggtgtttctgtgtggtgtcagcttcttctacagcacagatcctttcag
gcagcctactgtctttcagaaaggagaaactgaggcaccaatgacatggt
agaagcaccagaaacactgagcaacagctatgttttggctggatgagctt
tataggatcagtattgacaatctttaacatgttcatttttctagaataac
aatttcttgggactggtgagacggctcagtgggttaagaacactgactgc
tcttccgaaaggtcttgagttccaatcccagcaaccacatgggtggctca
caaccatctgtaatgagatctgacgccctcttctggtatgtctgaaaaac
agctacagtgtacttacatataataaaataatctaaaaaaaaacccaagt
tctttttgaatattaattttaatatatgcaacgtacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60738296_60739378
seq2: B6Ng01-330M23.b_47_1133 (reverse)

seq1  TCTATCA-TCTGCCTCCCCTTGATATATCCACTTATA-TTTTATACTACT  48
      ||||||| ||||||| ||| |||||||| |||||||| ||||||||||||
seq2  TCTATCATTCTGCCT-CCCGTGATATATTCACTTATATTTTTATACTACT  49

seq1  GT-AACT-CTGGAATCAGAAGTGATCTCTTACATTGATGTAAGAGGCGAA  96
      || |||| |||||||||||||||||||||||||||||||| |||||||||
seq2  GTAAACTCCTGGAATCAGAAGTGATCTCTTACATTGATGT-AGAGGCGAA  98

seq1  GG-AAAAAAATTGTAATTTTATAATATTAAGAACAAAATTTTCCTCTACT  145
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAATTGTAATTTTATAATATTAAGAACAAAATTTTCCTCTACT  148

seq1  CACATGGCACTCTTATTGCCCATTTTGTTTGGTTTTCACACAGGAAG-CC  194
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACATGGCACTCTTATTGCCCATTTTGTTTGGTTTTCACACAGGAAGCCC  198

seq1  TTCAGCCACAGCTCTGAGAAACACTGGTTCTCTAATGAGTGGAAATGCTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCACAGCTCTGAGAAACACTGGTTCTCTAATGAGTGGAAATGCTC  248

seq1  CTAAGTGCATTTGGGAATGCTTAGGGCTTCCAAAGTGCAGGGCAATGAAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGCATTTGGGAATGCTTAGGGCTTCCAAAGTGCAGGGCAATGAAA  298

seq1  GCGCCATTAATGGGCAACTGTTGGATCTCCATGAGCTAAGAGCCAAGTAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCATTAATGGGCAACTGTTGGATCTCCATGAGCTAAGAGCCAAGTAA  348

seq1  CTGAATTTCAAACTGAATGTCAACACAACTTCTGGTTGAAAACTTTTAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTTCAAACTGAATGTCAACACAACTTCTGGTTGAAAACTTTTAAG  398

seq1  TAAAAAGAAAAAAAAAATCACACGCTTGGATGTAATTATATCACCTGTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAAAAAAAAATCACACGCTTGGATGTAATTATATCACCTGTCT  448

seq1  ACTCACCCACAAGTGACTAGACATGCAGCAAAAACTAAAACTGATTTTGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCCACAAGTGACTAGACATGCAGCAAAAACTAAAACTGATTTTGC  498

seq1  GTAATGAATTTCAGAGCCGCTGTGCACATTTTAAAAAGTAAAAAGAATGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGAATTTCAGAGCCGCTGTGCACATTTTAAAAAGTAAAAAGAATGC  548

seq1  AAAGGAATGAATAATGAAGGACTCTTTCCTGGTGTTTATTTATTTATTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATGAATAATGAAGGACTCTTTCCTGGTGTTTATTTATTTATTTT  598

seq1  TAACTTCCTGAGCAACTAAAAGGGCAAAGGTGGGCAGTAACCGGGAAAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCTGAGCAACTAAAAGGGCAAAGGTGGGCAGTAACCGGGAAAAA  648

seq1  AGGGATTTTAAAGGCAAATATGAAGATGATGTTTGCAACTGGAAATATAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTTAAAGGCAAATATGAAGATGATGTTTGCAACTGGAAATATAG  698

seq1  CTCAGTAGTGGAGCATTTGCCTTGTACGTGTAAGGACCTAAGTTCAATTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAGTGGAGCATTTGCCTTGTACGTGTAAGGACCTAAGTTCAATTC  748

seq1  CCGGCAACGATAAATATACACAGGATGTTTACCTTAAAGTAATTTGAAAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCAACGATAAATATACACAGGATGTTTACCTTAAAGTAATTTGAAAT  798

seq1  TTCTGTTTTCTTTAGAAATTATTAATCTCTTAGTAAAAGTACTCTTCAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTCTTTAGAAATTATTAATCTCTTAGTAAAAGTACTCTTCAAA  848

seq1  TCGTATTAGAAACTTTAATTTTGCCTCTTGACTGGACTACAAATCGAGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTATTAGAAACTTTAATTTTGCCTCTTGACTGGACTACAAATCGAGAA  898

seq1  GATGACTGCTCTACTTGGCGTGTAAAGTTAAGATCATACATGCCTGGAGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTGCTCTACTTGGCGTGTAAAGTTAAGATCATACATGCCTGGAGG  948

seq1  TCCAGCTGCTTAACTGGGTCAGCGTGCAGTGGAAGGGCTTCAGAGCAGTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGCTTAACTGGGTCAGCGTGCAGTGGAAGGGCTTCAGAGCAGTA  998

seq1  CTATTTTGAATGGGAGAGCCTAGTATCTCAAGCCTGCAAGGCAATCACTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGAATGGGAGAGCCTAGTATCTCAAGCCTGCAAGGCAATCACTT  1048

seq1  TCCCCAATAAGCCTTCGCCTCAGCTCCCATAGGGAATTC  1083
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAATAAGCCTTCGCCTCAGCTCCCATAGGGAATTC  1087

seq1: chr2_60604469_60605547
seq2: B6Ng01-330M23.g_68_1155

seq1  GAATTCTCTTCGGTCTACGTTACTCAGAGTCTACTGTGTGCTCGGTCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCGGTCTACGTTACTCAGAGTCTACTGTGTGCTCGGTCCAC  50

seq1  AGGAGCAGGCCGTGCAGCAGTCCATAAATCAGATCTTCCTCAGGGCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGGCCGTGCAGCAGTCCATAAATCAGATCTTCCTCAGGGCTTTT  100

seq1  GTGCTGTGTAGCTGAGGATATGCCCACTCTTATGAAAGCCTGTTTACCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGTAGCTGAGGATATGCCCACTCTTATGAAAGCCTGTTTACCTC  150

seq1  AATAGGACAGCAGACAGTGAAGACATGTGTGCTTTAATAAAAATGCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGACAGCAGACAGTGAAGACATGTGTGCTTTAATAAAAATGCTCCA  200

seq1  TTGAAAGACATACAGATGCAAGAACAGCTGACATTCCTTCCTGACACGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGACATACAGATGCAAGAACAGCTGACATTCCTTCCTGACACGAC  250

seq1  TCTATTGTCTTGGGGGCGGGGGGCACGGGTAAGAAAGAGTCCATGCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTCTTGGGGGCGGGGGGCACGGGTAAGAAAGAGTCCATGCTTAT  300

seq1  AAACTCTTCAAGCCTTGTTTACTACCGAGACCACCCACTTGCTTTAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTCAAGCCTTGTTTACTACCGAGACCACCCACTTGCTTTAGGAA  350

seq1  AATCATGTCATACAAAGTTGGGGAACTTCCTGATTTTCTTGGTGACAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGTCATACAAAGTTGGGGAACTTCCTGATTTTCTTGGTGACAAAG  400

seq1  GGTTTAATTCACTGTAACTAACAGTTCTCTTGGCACTGTGCAACCCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAATTCACTGTAACTAACAGTTCTCTTGGCACTGTGCAACCCTTGG  450

seq1  ATGAGTTTGGTCAGATTTTTTTTTGGTGGGTAGGAACAAGATGTGGGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTGGTCAGATTTTTTTTTGGTGGGTAGGAACAAGATGTGGGCCA  500

seq1  GGTTTTTATATTCTGTTTACGTGTATGCAAGTCTGTTACAGAATGGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTATATTCTGTTTACGTGTATGCAAGTCTGTTACAGAATGGGCAG  550

seq1  CCTGGCTTCATCAGCCTCTCTGGTGCTTCCAGGCCAGACCATAGTGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCATCAGCCTCTCTGGTGCTTCCAGGCCAGACCATAGTGCAGG  600

seq1  TCCTTTGCTTGCCTCTGGAAGCCCAAAGCATGGGTTCCAGGCTAAAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGCTTGCCTCTGGAAGCCCAAAGCATGGGTTCCAGGCTAAAGAGT  650

seq1  CAGGTGTTTCTGTGTGGTGTCAGCTTCTTCTACAGCACAGATCCTTTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTTCTGTGTGGTGTCAGCTTCTTCTACAGCACAGATCCTTTCAG  700

seq1  GCAGCCTACTGTCTTTCAGAAAGGAGAAACTGAGGCACCAATGACATGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTACTGTCTTTCAGAAAGGAGAAACTGAGGCACCAATGACATGGT  750

seq1  AGAAGCACCAGAAACACTGAGCAACAGCTATG-TTTGGCTGGATGAGCTT  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAAGCACCAGAAACACTGAGCAACAGCTATGTTTTGGCTGGATGAGCTT  800

seq1  TATAGGATCAGTATTGACAATCTTTAACATGTTCATTTTTCTAGAATAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATCAGTATTGACAATCTTTAACATGTTCATTTTTCTAGAATAAC  850

seq1  AA-TTCTTGGGACTGGTGAGACGGCTCAGT-GGTTAAGAACACTGACTGC  897
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATTTCTTGGGACTGGTGAGACGGCTCAGTGGGTTAAGAACACTGACTGC  900

seq1  TCTTCCG-AAGGTCTTGAGTTCCAATCCCAGCAACCACAT-GGTGGCTCA  945
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  TCTTCCGAAAGGTCTTGAGTTCCAATCCCAGCAACCACATGGGTGGCTCA  950

seq1  CAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTATGTCTG-AAAAC  994
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTATGTCTGAAAAAC  1000

seq1  AGCTACAGTGTACTTACATATAATAAATAAATCTAAAAAAAAACC--AAT  1042
      |||||||||||||||||||||||||||  ||||||||||||||||  | |
seq2  AGCTACAGTGTACTTACATATAATAAAATAATCTAAAAAAAAACCCAAGT  1050

seq1  TCTTTTTG-ATATTATTTTTAATTATATGC-ACGTACAT  1079
      |||||||| |||||| |||||| ||||||| ||||||||
seq2  TCTTTTTGAATATTAATTTTAA-TATATGCAACGTACAT  1088