BAC Information

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BAC

Clone NameB6Ng01-330O13
Chromosome2 (Build37)
Map Location 126,400,967 - 126,402,161
singlet/doubletsinglet
Overlap geneSlc27a2
Upstream geneCep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2, Fgf7, Dtwd1, Atp8b4
Downstream geneHdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330O13.bB6Ng01-330O13.g
ACCGA117425GA117426
length1,1851,184
definitionB6Ng01-330O13.b B6Ng01-330O13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggaaagaagctgtgtcggcccagactgttcaactgattagaa
cctcaatggccctgcagagtttcgaatgttgcaggtccagagccctaatt
acaaatttattttgggctacctttagccccctagacacccatttcttgcc
cacttctgtgtcagacttggcaccctctgactaatggataagaccttttg
gctttattaactaataaaaccctagttttctactaattaaaagactaaga
tagactctgaggcgatggcagtgttggctccatcttactatgatccttac
ctgatgtgtccaccaacgcatttgagaagtgggttgatttatggcttcct
ttgttctatttctatgaaaatgccctgaaactgctacctcactgaagact
gaggaatggtattggggggacctaaacctaagtcccgggtccatggccac
tcatgtttggctccagaataaactttcttactccctttgacgtgggagtt
gtgctgtggtgacaacagccccatattttggctattgtcgctaatactgt
aataataggagtgaacgtatcttactggtataacaatttcctcccaaaag
tttttttttttttaaagatttatttatttattatatgtgagtatactgta
gctgtcttcagacactccagaaagaggtgtcagatctctttacggatggt
tgtgagccatcatgtggttgctgggacttgaactcaggacctttggaaga
gcagtcagtgctcttaactgctgagccatttctccagccctctcccaaaa
gttttttattttcatttgtgtatatatgccatttttccatgtctagaaat
aacactttcagtttgttttgctattatattgtagtgaacatcatcccgtt
agactttctaattattattctctgatatactacatcctgacttcagcccc
ccacctccagaaaagagcagcttctcagagaccttcaaccaaatacagct
ccacacgctacaacaataccagacacagatcgtcacgtcaaagctgggta
aagcacccaggttagggaaaaggtcccacaagtagaacaagagtcagagg
agagcccctccattctaactgtagatctcccagaccagtcactaacatac
attaactatctataagagacttagtcaggacgact
gaattccctatgtatatatggaatatatataggtttaggttcctagcctc
ctgcctttgggtttggttgttctgagataaggccctggtgttttttaaaa
gctgtgtagggttaagagcagcagcccagaccttcaagagaactgagatg
ttcaggtcaacatgcatgttctcctcacaggttgaccagaaagatgtgcc
tcatttctctctcctctctcagttgttttataacctggaggccctgaaga
gtctggtctctcggtagtcagtcattccaagtataacggtggattagggc
cctctatcggcctgtgcagtcagtgttaccttgtctctgactaggaaaca
gccacaggagagctctgagatgacctttgtccccagggactgaccaataa
agtaatgaaaacagtagtccatatgctagacactgtgactctgaagggca
gatctgagcacactgcttgctagctgagtcgccctgagaagctatataca
ttccttaggcctcagtttcaacatcttgaaacagaaataaaaggaaaaga
ttgagcccagcgcctagtggaagctcagggttaatacagggaagacttgc
tgagttatttattcaagatccctgttgtgtaacaaccttggacataaagc
cttccatttcttatactctggttggagcataagacattcccaaagttcaa
gggccctccaacaacggcatcaaacccacactgtgcaactcggtccctga
cctccgggccttggcagtccagtaaggtagcctaaagctgtgtgtaaata
tttagatgtcaataaagcaaattttggaattcagtttgtcattcacagta
acagctgccttgcaagtgttcagtaggcacacgtcactggccccaccctg
agcagagcagatattccttccatcacggacaccctacggagccacgctgc
tgtaggctggaatgtagtgtcagccagtgtgactagcctagctgtggaga
tggaggacacacagcagcttgcagcgctgctactgttgactcagagagga
ctttagggatttgttttcgaccaaactctccttacacaatgttacatagg
cacacttagcctcctttctttccatccaatggtctcagtcttgttcagct
tttctacgtgaagcacaactctctttttaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_126400967_126402161
seq2: B6Ng01-330O13.g_70_1253

seq1  GAATTCCCTATGTATATATGGAATATATATAGGTTTAGGTTCCTAGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATGTATATATGGAATATATATAGGTTTAGGTTCCTAGCCTC  50

seq1  CTGCCTTTGGGTTTGGTTGTTCTGAGATAAGGCCCTGGTGTTTTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTGGGTTTGGTTGTTCTGAGATAAGGCCCTGGTGTTTTTTAAAA  100

seq1  GCTGTGTAGGGTTAAGAGCAGCAGCCCAGACCTTCAAGAGAACTGAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTAGGGTTAAGAGCAGCAGCCCAGACCTTCAAGAGAACTGAGATG  150

seq1  TTCAGGTCAACATGCATGTTCTCCTCACAGGTTGACCAGAAAGATGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTCAACATGCATGTTCTCCTCACAGGTTGACCAGAAAGATGTGCC  200

seq1  TCATTTCTCTCTCCTCTCTCAGTTGTTTTATAACCTGGAGGCCCTGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTCTCTCCTCTCTCAGTTGTTTTATAACCTGGAGGCCCTGAAGA  250

seq1  GTCTGGTCTCTCGGTAGTCAGTCATTCCAAGTATAACGGTGGATTAGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTCTCTCGGTAGTCAGTCATTCCAAGTATAACGGTGGATTAGGGC  300

seq1  CCTCTATCGGCCTGTGCAGTCAGTGTTACCTTGTCTCTGACTAGGAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATCGGCCTGTGCAGTCAGTGTTACCTTGTCTCTGACTAGGAAACA  350

seq1  GCCACAGGAGAGCTCTGAGATGACCTTTGTCCCCAGGGACTGACCAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGGAGAGCTCTGAGATGACCTTTGTCCCCAGGGACTGACCAATAA  400

seq1  AGTAATGAAAACAGTAGTCCATATGCTAGACACTGTGACTCTGAAGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGAAAACAGTAGTCCATATGCTAGACACTGTGACTCTGAAGGGCA  450

seq1  GATCTGAGCACACTGCTTGCTAGCTGAGTCGCCCTGAGAAGCTATATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAGCACACTGCTTGCTAGCTGAGTCGCCCTGAGAAGCTATATACA  500

seq1  TTCCTTAGGCCTCAGTTTCAACATCTTGAAACAGAAATAAAAGGAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAGGCCTCAGTTTCAACATCTTGAAACAGAAATAAAAGGAAAAGA  550

seq1  TTGAGCCCAGCGCCTAGTGGAAGCTCAGGGTTAATACAGGGAAGACTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCCAGCGCCTAGTGGAAGCTCAGGGTTAATACAGGGAAGACTTGC  600

seq1  TGAGTTATTTATTCAAGATCCCTGTTGTGTAACAACCTTGGACATAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTATTTATTCAAGATCCCTGTTGTGTAACAACCTTGGACATAAAGC  650

seq1  CTTCCATTTCTTATACTCTGGTTGGAGCATAAGACATTCCCAAAGTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTTCTTATACTCTGGTTGGAGCATAAGACATTCCCAAAGTTCAA  700

seq1  GGGCCCTCCAACAACGGCATCAAACCCACACTGTGCAACTCGGTCCCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTCCAACAACGGCATCAAACCCACACTGTGCAACTCGGTCCCTGA  750

seq1  CCTCCGGGCCTTGGCAGTCCAGTAAGGTAGCCTAAAGCTGTGTGTAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGGGCCTTGGCAGTCCAGTAAGGTAGCCTAAAGCTGTGTGTAAATA  800

seq1  TTTAGATGTCAATAAAGCAAATTTTGGAATTCAGTTTGTCATTCACAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGTCAATAAAGCAAATTTTGGAATTCAGTTTGTCATTCACAGTA  850

seq1  ACAGCTGCCTTGCAAGTGTTCAGTAGGCACACGTCACTGGCCCCACCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGCCTTGCAAGTGTTCAGTAGGCACACGTCACTGGCCCCACCCTG  900

seq1  AGCAGAGCAGATATTCCTTCCATCACGGACAACCCTACGGAGCCACGCTG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGCAGAGCAGATATTCCTTCCATCACGGAC-ACCCTACGGAGCCACGCTG  949

seq1  CTGTAGGCTGGAATGTTAGTGTCAGGCCAGTGTGAACTAGCCTAGCTGTG  1000
      ||||||||||||||| |||||||| ||||||||| |||||||||||||||
seq2  CTGTAGGCTGGAATG-TAGTGTCA-GCCAGTGTG-ACTAGCCTAGCTGTG  996

seq1  GAGATGGAGGACAACCACAAGCAAGCTGGCAGCGCTGCTACTGTTGACCT  1050
      |||||||||||||  ||| ||| |||| ||||||||||||||||||| ||
seq2  GAGATGGAGGACA--CAC-AGC-AGCTTGCAGCGCTGCTACTGTTGA-CT  1041

seq1  CAGAGAGGACTTTTAGGGGAATTTGTTTTCGACCAAACTTCTCCTTACAC  1100
      |||||||||| |||||||  |||||||||||||||||| |||||||||||
seq2  CAGAGAGGAC-TTTAGGG--ATTTGTTTTCGACCAAAC-TCTCCTTACAC  1087

seq1  -ATG-TACATAAGCACACCTAG-CTCTTTCCTTTCTCATCCATTGGTCCT  1147
       ||| |||||| |||||| ||| ||| || ||||| |||||| |||| ||
seq2  AATGTTACATAGGCACACTTAGCCTCCTTTCTTTC-CATCCAATGGT-CT  1135

seq1  CAGGTCCTTGTCAGCTTTTCTACGTGAAGCA-AACTC-CTTTAAAAAGGA  1195
      || ||| |  ||||||||||||||||||||| ||||| ||||  ||||||
seq2  CA-GTCTTGTTCAGCTTTTCTACGTGAAGCACAACTCTCTTTTTAAAGGA  1184