BAC Information

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BAC

Clone NameB6Ng01-330P15
Chromosome2 (Build37)
Map Location 126,928,857 - 126,929,522
singlet/doubletsinglet
Overlap genenone
Upstream geneDtwd1, Atp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra
Downstream geneNcaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330P15.bB6Ng01-330P15.g
ACCGA117471GA117472
length6661,049
definitionB6Ng01-330P15.b B6Ng01-330P15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacagccagggctacacagagaaatcctgttttgaaaaaca
aaaagaattaccaattgcactcttgcttcttgtccatcatcccaggtgct
gaccaggacaatgagtgacagggacccaaggcacactgcaagccatcctg
acgctcatttccccaaggtatgagaagacattttatatctgggagcatga
attctgtagggctggatgaggtcctagccctgcagtgtggagctagaaga
cagaaggcaggcaacaggcgtccgaacttgctggtgactgggaatggtga
ggacaccggggagtcatcgtgtagcccgtgactacaacagcacagcagca
agatggctgccagagagtcaggatgcatcagctcaaggcctgtccctgaa
acaacctgacccgcttccgtgtctgtcctctttaacttggtgtactcccc
aagtggggtccaggctaagtgaagtcacaggaggacaagagaacacttct
accacctttgctactgccacccctcccccagagtccataggtgcttaaat
acagatctgacctccaaacagctgttctgtttcctcttgccttttctgta
ccctggccccgataggtgtggcctcctcaggggataacggggtgtatgtg
tgtgtgtatgtgtgtg
gaattcattccatgctgtgtttgatattgcttatgttcaactttagtatc
ttcttaattgtgaacatctgggatcacctgacacttgcataaaacagatg
aaacagactttttgagtgcttcaattgcatcatctttgtaatcccaccat
ttgttatggggtggtgctttaggacattgctgtgtactgtccagtctctg
ataaaagttttgttacatggataacacaatgctcagcttcgagtgttttg
cagatttgacaagccattagagagacacccaggtacaatggtacttctgc
ctacttcagagtcctaccaggggcataattgaaaggaaaaggtacaaaag
ggagcctacttgtgtgaacagtgatacttccagaaggctcatggtaacta
aatgaaaaccccactgcatggatgggctgcctacctgagagttgatggct
gtggaaaccctagagcccccacaaaccataaattctattgctatacttgc
tggttgtatgccagaactagaaagtaagactgtgcttgctgcttgctgaa
gacggtgctttggcctgaccttcaccatataggacttgcttcaattaagc
tggaacagaactagaagctcccaccttgctggactgtatcatagtgtcag
aggataccatgaaggttgctggtaaagaactgtcacccacattcctgctt
acctatggaccctgattgctaacacactgacattccagacagaaatgaga
agaatgttcccctcattcagtagtagtgaggctgttatgggtaagactaa
tagcttttctgattggatttaaggcccactccacaggagggagttcatat
ctggctttgaacaaaaacctctagatggggtggtcacaatggggaagcaa
cttctatttttttaaatatatttttattagtatgttcttcatttacatta
aaaacgctattccaaaagtccccatacccttccccacccccattctctac
ccggcacttccatcttctgtcctgccgtttcctggactgggtactataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_126928857_126929522
seq2: B6Ng01-330P15.b_45_710

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAATCCTGTTTTGAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAATCCTGTTTTGAAAAACA  50

seq1  AAAAGAATTACCAATTGCACTCTTGCTTCTTGTCCATCATCCCAGGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTACCAATTGCACTCTTGCTTCTTGTCCATCATCCCAGGTGCT  100

seq1  GACCAGGACAATGAGTGACAGGGACCCAAGGCACACTGCAAGCCATCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGACAATGAGTGACAGGGACCCAAGGCACACTGCAAGCCATCCTG  150

seq1  ACGCTCATTTCCCCAAGGTATGAGAAGACATTTTATATCTGGGAGCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCATTTCCCCAAGGTATGAGAAGACATTTTATATCTGGGAGCATGA  200

seq1  ATTCTGTAGGGCTGGATGAGGTCCTAGCCCTGCAGTGTGGAGCTAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTAGGGCTGGATGAGGTCCTAGCCCTGCAGTGTGGAGCTAGAAGA  250

seq1  CAGAAGGCAGGCAACAGGCGTCCGAACTTGCTGGTGACTGGGAATGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCAGGCAACAGGCGTCCGAACTTGCTGGTGACTGGGAATGGTGA  300

seq1  GGACACCGGGGAGTCATCGTGTAGCCCGTGACTACAACAGCACAGCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCGGGGAGTCATCGTGTAGCCCGTGACTACAACAGCACAGCAGCA  350

seq1  AGATGGCTGCCAGAGAGTCAGGATGCATCAGCTCAAGGCCTGTCCCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTGCCAGAGAGTCAGGATGCATCAGCTCAAGGCCTGTCCCTGAA  400

seq1  ACAACCTGACCCGCTTCCGTGTCTGTCCTCTTTAACTTGGTGTACTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTGACCCGCTTCCGTGTCTGTCCTCTTTAACTTGGTGTACTCCCC  450

seq1  AAGTGGGGTCCAGGCTAAGTGAAGTCACAGGAGGACAAGAGAACACTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGGTCCAGGCTAAGTGAAGTCACAGGAGGACAAGAGAACACTTCT  500

seq1  ACCACCTTTGCTACTGCCACCCCTCCCCCAGAGTCCATAGGTGCTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTTTGCTACTGCCACCCCTCCCCCAGAGTCCATAGGTGCTTAAAT  550

seq1  ACAGATCTGACCTCCAAACAGCTGTTCTGTTTCCTCTTGCCTTTTCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTGACCTCCAAACAGCTGTTCTGTTTCCTCTTGCCTTTTCTGTA  600

seq1  CCCTGGCCCCGATAGGTGTGGCCTCCTCAGGGGATAACGGGGTGTATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCCCCGATAGGTGTGGCCTCCTCAGGGGATAACGGGGTGTATGTG  650

seq1  TGTGTGTATGTGTGTG  666
      ||||||||||||||||
seq2  TGTGTGTATGTGTGTG  666