BAC Information

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BAC

Clone NameB6Ng01-331D05
Chromosome2 (Build37)
Map Location 47,724,058 - 47,829,196
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l, LOC100041508
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331D05.bB6Ng01-331D05.g
ACCGA117639GA117640
length7291,021
definitionB6Ng01-331D05.b B6Ng01-331D05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,724,058 - 47,724,786)(47,828,656 - 47,829,196)
sequence
gaattcaaatagtttaataatttatttgactgacaggtataaggttcata
gtagatttatatgtcacctatgagctgaaattatttcttctgtatagtct
tactgctgtgtatgtaagttaacaggaaagtcaatgatacatgtcccata
ctgctaatctgactacccactgtaataagaaagcttgatttcaaaacctt
gtggtctatttgaatttgcaacataagctttttattctttcactatagag
aactatgattaaaagagtttgtgtgaagtctttgaaaacggtgtattgcc
tttatcttacttgtcaactagaagatccttaaggtagcatggagccctaa
aagagcagacaatcaaagggaactcatttgtttttagaagttgtgtacca
cccttatttcattcttgtgtgtcttacaaaatatcagactccctcttaat
taaattttttgacatttttccccagatttttatcccagtgttcataatag
cactgctctcagaaatgatccttggaactcagaaatcagttccacattca
atcaaaggaaaatataattagagatatgggatactcaacctttgttgaaa
gcagtttcctgtactagtttccccagaacacattttagtctactctagat
ggatgaataggaaatatatcatttaaactcttgtacttcctttcctttgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcctgggacatgaagcaggagtgggtgggttggtgagcagaggaag
ggggagaagataggggattttctgaggggaaactaggaaaggggatagca
tttgaaatgtaaataaaaaaatacctaataaaaattaaaataaaaaacca
agatattttgataaattttctttgccaacaaggtgagggtagtgtgactg
agtaattcttagttaactccaagaaggtaaaataaaagggtaagagcaat
caaggaaaactcactctgaacttgcaattgacgttttctcaccaaacttg
acttttttattagttttatctatgccatcttttaaaaaaaatttttatta
gatatttttcatttacatttcgaatgctatcccaaaagtcccttatacct
tccccccaccctgattccctacccatccactcccagttcttggccctgga
gttcccctctactgcagcatataaagtttgcaagaccaaggggcctctct
ttccaataatggccgactaggtcatcctctgttacatatgcagctagaga
aatgagctctgggggtactggttagttcatattgctgttccacctatagg
gttacagacccctcagctcctttgggtactttctctagctcttccattgg
gggccctgtagtcatccttatagatgactgtgagcattcacttctgtatt
tgccaggcactggcatcacctcacaagagacagctatatcagggtccttt
cagcaaaatcttgctggcatatccaatagtgtctgcgtttgttggctgat
tatgggatggaaccctgggtggggcagtctctggatggtcatccttcgtc
tttcgtaccctatgaccaaactttccaattttcctccttatggtagttgg
gatggattagaacctaaacctaacttgatgctagtgcaagtaactgagac
actccagagagaggaggcctaatcatagatgattctgcattgatgatccc
ccctctttgttgttattggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47724058_47724786
seq2: B6Ng01-331D05.b_48_776

seq1  GAATTCAAATAGTTTAATAATTTATTTGACTGACAGGTATAAGGTTCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAGTTTAATAATTTATTTGACTGACAGGTATAAGGTTCATA  50

seq1  GTAGATTTATATGTCACCTATGAGCTGAAATTATTTCTTCTGTATAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTTATATGTCACCTATGAGCTGAAATTATTTCTTCTGTATAGTCT  100

seq1  TACTGCTGTGTATGTAAGTTAACAGGAAAGTCAATGATACATGTCCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGTATGTAAGTTAACAGGAAAGTCAATGATACATGTCCCATA  150

seq1  CTGCTAATCTGACTACCCACTGTAATAAGAAAGCTTGATTTCAAAACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAATCTGACTACCCACTGTAATAAGAAAGCTTGATTTCAAAACCTT  200

seq1  GTGGTCTATTTGAATTTGCAACATAAGCTTTTTATTCTTTCACTATAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTATTTGAATTTGCAACATAAGCTTTTTATTCTTTCACTATAGAG  250

seq1  AACTATGATTAAAAGAGTTTGTGTGAAGTCTTTGAAAACGGTGTATTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGATTAAAAGAGTTTGTGTGAAGTCTTTGAAAACGGTGTATTGCC  300

seq1  TTTATCTTACTTGTCAACTAGAAGATCCTTAAGGTAGCATGGAGCCCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTACTTGTCAACTAGAAGATCCTTAAGGTAGCATGGAGCCCTAA  350

seq1  AAGAGCAGACAATCAAAGGGAACTCATTTGTTTTTAGAAGTTGTGTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGACAATCAAAGGGAACTCATTTGTTTTTAGAAGTTGTGTACCA  400

seq1  CCCTTATTTCATTCTTGTGTGTCTTACAAAATATCAGACTCCCTCTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATTTCATTCTTGTGTGTCTTACAAAATATCAGACTCCCTCTTAAT  450

seq1  TAAATTTTTTGACATTTTTCCCCAGATTTTTATCCCAGTGTTCATAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTTGACATTTTTCCCCAGATTTTTATCCCAGTGTTCATAATAG  500

seq1  CACTGCTCTCAGAAATGATCCTTGGAACTCAGAAATCAGTTCCACATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCTCAGAAATGATCCTTGGAACTCAGAAATCAGTTCCACATTCA  550

seq1  ATCAAAGGAAAATATAATTAGAGATATGGGATACTCAACCTTTGTTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGGAAAATATAATTAGAGATATGGGATACTCAACCTTTGTTGAAA  600

seq1  GCAGTTTCCTGTACTAGTTTCCCCAGAACACATTTTAGTCTACTCTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCCTGTACTAGTTTCCCCAGAACACATTTTAGTCTACTCTAGAT  650

seq1  GGATGAATAGGAAATATATCATTTAAACTCTTGTACTTCCTTTCCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAATAGGAAATATATCATTTAAACTCTTGTACTTCCTTTCCTTTGT  700

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTG  729
      |||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTG  729

seq1: chr2_47828656_47829196
seq2: B6Ng01-331D05.g_547_1084 (reverse)

seq1  AACCAATAACAACAAAGAGGGGTGGCTCATCAATGCAGAATC-TCTTTGA  49
      |||||||||||||||||||||| || |||||||||||||||| ||| |||
seq2  AACCAATAACAACAAAGAGGGG-GGATCATCAATGCAGAATCATCTATGA  49

seq1  TCTAGGCCTCCCTCTCTCTAGAGTGTCTTCATTTCCTTTGCACTAGCCTT  99
      | ||||||| ||||||||| ||||||| ||| || | ||||||||| | |
seq2  T-TAGGCCT-CCTCTCTCTGGAGTGTC-TCAGTTAC-TTGCACTAG-CAT  94

seq1  CAGTTTAGGTTTTAGTTTCT-ATCCATCCCAACTACCATTAGGA-GAAAA  147
      ||  ||||| ||||| |||| |||||||||||||||||| |||| |||||
seq2  CAAGTTAGG-TTTAGGTTCTAATCCATCCCAACTACCATAAGGAGGAAAA  143

seq1  TT-GAAAGTTTTGTCACTGGGTACCGAAGACGAAAGGATGAACCATCCAG  196
      || |||||||| ||||  ||||||  |||||| ||||||| |||||||||
seq2  TTGGAAAGTTTGGTCATAGGGTACGAAAGACG-AAGGATG-ACCATCCAG  191

seq1  AGACTGCCCCACCCAGGGTTCCATCCCATAATCAGCCAACAAACGCAGAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCCCCACCCAGGGTTCCATCCCATAATCAGCCAACAAACGCAGAC  241

seq1  ACTATTGGATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATATAGCTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGGATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATATAGCTG  291

seq1  TCTCTTGTGAGGTGATGCCAGTGCCTGGCAAATACAGAAGTGAATGCTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTGAGGTGATGCCAGTGCCTGGCAAATACAGAAGTGAATGCTCA  341

seq1  CAGTCATCTAT-AGGATGACTACAGGGCCCCCAATGGAAGAGCTAGAGAA  395
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCTATAAGGATGACTACAGGGCCCCCAATGGAAGAGCTAGAGAA  391

seq1  AGTACCC-AAGGAGCTGAGGGGTCTGTAACCCTATAGGTGGAACAGCAAT  444
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCAAAGGAGCTGAGGGGTCTGTAACCCTATAGGTGGAACAGCAAT  441

seq1  ATGAACTAACCAGTACCCCCAGAGCTCATTTCTCTAGCTGCATATGTAAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAACCAGTACCCCCAGAGCTCATTTCTCTAGCTGCATATGTAAC  491

seq1  AGAGGATGACCTAGTCGGCCATTATTGGAAAGAGAGGCCCCTTGGTC  541
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGACCTAGTCGGCCATTATTGGAAAGAGAGGCCCCTTGGTC  538