BAC Information

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BAC

Clone NameB6Ng01-331D09
Chromosome2 (Build37)
Map Location 43,104,746 - 43,105,878
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC100041228
Downstream geneLOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331D09.bB6Ng01-331D09.g
ACCGA117647GA117648
length1,1251,187
definitionB6Ng01-331D09.b B6Ng01-331D09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaacctccaaacctaaagcaaattgttttagaaacatctgac
tcttcaggcctctatgggatagtgtgtggatttattgcaggatagggact
tcaaattatgccctatacctctgtctctatgcagtggtcattcttttctg
tgtctaaggtcattgctgcagtcactttccaaccccttgtttttagaccc
ttctcactggtacagaaattattgagatttctaagtccagactgatgcca
gaaaccacacaataaatttaagtagaggaaaatgtaatgaaaggaatatt
tccaaattgtcacagtcagtaattctgaggatagatggtcagcaagtcta
gaggcgagtcctccagggaggactctcaaaggggttcagagtttatagaa
gaaggtctgggacacatctcactgagctttcctggactaagcaagaccac
agagagtagagtagaacctggatgaaggtcaagttggagagagcagccag
aagaaagagtctgagcaacatggcagacatgtgactgatgcacagggtca
ttatgtaggaacttggagtgggcctagctgtgtgggacagaggtggtctg
ctgatgtaggtaaactgcagctgaagagaggatgtgagaaggagagcaga
ttctgaagtgtgggctggatttacattctgcagtgtggggaaccctaaag
tgcctctggtacagtttggcaatgtacattctcacagaacttcaagatca
gggtctagtttgattttaattgccatgctaaaggcacactaacaaaaggc
aacttagagtaggaagggttttacttcagtatgcagttcttatagtccag
gatcccagggaagtcaatgaacaactagtgacataatatccatacgcaag
tgtggagataaataaatctacctagctcatatgcttgcttgtctgtgcat
aatttctctacttccatgtatcaattaacttactttaagcaattctcaga
ggcaccctgagatagacatctctcacagagactctgtttcaggtagttta
gttgtctttcattgaacattaaatcagccatacgcatggtgaaaaacatt
cacttgcttgtatgccactcctgat
gaattcaggatacatgttatttcttccaagaagatgggttctggcggtag
cctatctatattagcttaagggcctatggaatgataaagcatggcctcag
tcatacagaaggtgtagaggtcatttgggccattagccacctttggtcct
ggttataggctcttggaggaccctctgactatacaggtaatataagagtc
attttgactattagatagatatttcttgttccagttgtgggaacttggga
gtgctacttgctatatgtggggagcgggtgtggcggcagtcccaaaggcg
ccagagactgcagctaagtcgtatgacttgcacctgacttcctcatataa
gacacaaacatcttgagtgctgggcaggtgtaccaggatacaggtgaatc
caatttggtggagatttgcccctgctgccctgattagctgaagcttcgtg
cctggtgaggtggcgtggcctgctgtgcgtggatgggaactgagagtata
taagagtgagaggcccgggttagagggaggattattattcgagagaggat
tactattaggggggagatataaaaacaagggagatataaacaagggagat
atatggagaaagaagagacaggactgaataaacgtgtgcagaaggatcct
gtaacagcgtcgttcttcctggccagttgagcgcgcgcaacattattaga
ttattattacatataacatagaatatatatattatataatatatataata
tatataatatattatatatctaatacagcgatgctcccgataatcgtctt
cccaatgctgacacatagcatacactagcaagttttactgaaaggaccca
tatgtagctgtctcctcgtaagactatgtcggggcctagcaacacagaag
cggatgcttcacagtcagcttatgtatggatcacagagcttcccaatgga
aggagctagagaaagctcccaaggaagctagagtgatccttcaacgcctg
ataggatggaacaagcattatcgaactaacacagtaccccctgagcctct
tgaatgctagctgctatgtgtattcagatgaattgggcttatcgctcaat
cagctgagtaaagaagatgcccatatggatactcaaacttttggtgctgc
tcgttatcagtgtatcacgctcctaagcggcctaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43104746_43105878
seq2: B6Ng01-331D09.b_46_1170

seq1  GAATTCTAAAACCTCCAAACCTAAAGCAAATTGTTTTAGAAACATCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAACCTCCAAACCTAAAGCAAATTGTTTTAGAAACATCTGAC  50

seq1  TCTTCAGGCCTCTATGGGATAGTGTGTGGATTTATTGCAGGATAGGGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGCCTCTATGGGATAGTGTGTGGATTTATTGCAGGATAGGGACT  100

seq1  TCAAATTATGCCCTATACCTCTGTCTCTATGCAGTGGTCATTCTTTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTATGCCCTATACCTCTGTCTCTATGCAGTGGTCATTCTTTTCTG  150

seq1  TGTCTAAGGTCATTGCTGCAGTCACTTTCCAACCCCTTGTTTTTAGACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAGGTCATTGCTGCAGTCACTTTCCAACCCCTTGTTTTTAGACCC  200

seq1  TTCTCACTGGTACAGAAATTATTGAGATTTCTAAGTCCAGACTGATGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTGGTACAGAAATTATTGAGATTTCTAAGTCCAGACTGATGCCA  250

seq1  GAAACCACACAATAAATTTAAGTAGAGGAAAATGTAATGAAAGGAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACACAATAAATTTAAGTAGAGGAAAATGTAATGAAAGGAATATT  300

seq1  TCCAAATTGTCACAGTCAGTAATTCTGAGGATAGATGGTCAGCAAGTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTGTCACAGTCAGTAATTCTGAGGATAGATGGTCAGCAAGTCTA  350

seq1  GAGGCGAGTCCTCCAGGGAGGACTCTCAAAGGGGTTCAGAGTTTATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGAGTCCTCCAGGGAGGACTCTCAAAGGGGTTCAGAGTTTATAGAA  400

seq1  GAAGGTCTGGGACACATCTCACTGAGCTTTCCTGGACTAAGCAAGACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTCTGGGACACATCTCACTGAGCTTTCCTGGACTAAGCAAGACCAC  450

seq1  AGAGAGTAGAGTAGAACCTGGATGAAGGTCAAGTTGGAGAGAGCAGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTAGAGTAGAACCTGGATGAAGGTCAAGTTGGAGAGAGCAGCCAG  500

seq1  AAGAAAGAGTCTGAGCAACATGGCAGACATGTGACTGATGCACAGGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGTCTGAGCAACATGGCAGACATGTGACTGATGCACAGGGTCA  550

seq1  TTATGTAGGAACTTGGAGTGGGCCTAGCTGTGTGGGACAGAGGTGGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGGAACTTGGAGTGGGCCTAGCTGTGTGGGACAGAGGTGGTCTG  600

seq1  CTGATGTAGGTAAACTGCAGCTGAAGAGAGGATGTGAGAAGGAGAGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTAGGTAAACTGCAGCTGAAGAGAGGATGTGAGAAGGAGAGCAGA  650

seq1  TTCTGAAGTGTGGGCTGGATTTACATTCTGCAGTGTGGGGAACCCTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTGTGGGCTGGATTTACATTCTGCAGTGTGGGGAACCCTAAAG  700

seq1  TGCCTCTGGTACAGTTTGGCAATGTACATTCTCACAGAACTTCAAGATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGGTACAGTTTGGCAATGTACATTCTCACAGAACTTCAAGATCA  750

seq1  GGGTCTAGTTTGATTTTAATTGCCATGCTAAAGGCACACTAACAAAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTAGTTTGATTTTAATTGCCATGCTAAAGGCACACTAACAAAAGGC  800

seq1  AACTTAGAGTAGGAAGGG-TTTACTTCAGTATGCAGTTCTTATAGTCCAG  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACTTAGAGTAGGAAGGGTTTTACTTCAGTATGCAGTTCTTATAGTCCAG  850

seq1  GATCCCAGGGAAGTCAATGAACAACTAGTGACATAATATCCATACGCAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCAGGGAAGTCAATGAACAACTAGTGACATAATATCCATACGCAAG  900

seq1  TGTGGAGATAAATAAATCTACCTAGCTCATATGCTTGCTTGTCTGTGCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGATAAATAAATCTACCTAGCTCATATGCTTGCTTGTCTGTGCAT  950

seq1  AATTTCTCTACTTCCATGTATCAATTAACTTACTTAAAGCAATTCTCCAG  999
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  AATTTCTCTACTTCCATGTATCAATTAACTTACTTTAAGCAATTCT-CAG  999

seq1  AGGCACCCTGAGATAGACAATCTCTCACAGAGACTCTTGTTTCAGGTGGT  1049
      |||||||||||||||||| ||||||||||||||||| |||||||||| ||
seq2  AGGCACCCTGAGATAGAC-ATCTCTCACAGAGACTC-TGTTTCAGGTAGT  1047

seq1  TTTAGGTTGTCTTTCATTGACAATTAAATCCAGCCATTACACAGGGTGAA  1099
      ||   |||||||||||||||  ||||||| |||||| ||| || ||||||
seq2  TT--AGTTGTCTTTCATTGAACATTAAAT-CAGCCA-TACGCATGGTGAA  1093

seq1  AAAACATCACTTGCCTTGTAATGCCACTCCTGAT  1133
      |||   ||||||| ||||| ||||||||||||||
seq2  AAACATTCACTTG-CTTGT-ATGCCACTCCTGAT  1125