BAC Information

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BAC

Clone NameB6Ng01-331F02
Chromosome2 (Build37)
Map Location 140,751,720 - 140,779,610
singlet/doubletdoublet
Overlap genenone
Upstream geneTasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331F02.bB6Ng01-331F02.g
ACCGA117716GA117717
length1,1131,179
definitionB6Ng01-331F02.b B6Ng01-331F02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,778,501 - 140,779,610)(140,751,720 - 140,752,893)
sequence
gaattccaagtatgtaaatctagtaaatgccactctctccaggttcttta
tgaaatgtctaaaatgcttgttaatatgaaaaacatactcagaattcatt
gtaggtagttattactattgatgcttagattataaaccaaactgattgta
aactttagcaatcacaaatagcacttatatctgcctacttttagtatttt
caaagcactgggttcaactcaactttcattattataattatcttaaacgt
atgttttcacacataatagcttgaaaaaagaaaaagaaacccttaaacaa
tagaaggcttagaaatctaaaatgcgtcattctctattatgtgaataatt
taaaataagtgatagaaaaaataaaatatgtattttgacccaaatacact
atccacaatgaataaacattgtaataactcacaaataaaagatattttct
tcccagcattcaaagaataactattcagagtttattcgaacacaattgct
gtcctgaggaaaaccctcatcggccggtgaagaagcagccccaggtagaa
atggaaaattaccagcagcattcgcagtataacaaatggtaacatccagg
gaaaactattctatttattaagggaaataaaatagaaagttacattggat
ttacttggaaaataaaataaaaatcaccagcctactctatgtattaactt
tggcatttagagtgaacacagaatagacagttcgtgttagttgagaaggc
tatatctcaaaaaagagagagagagagagagagagagagagagagagaga
gagagagagagagaagaaaaagtaaaagaaaaaaaagaaaagaaacaaaa
agaaaaacaaagcaaaaacaaaagcaaaaaaaccaaaaaacaaaaaacaa
aaaagaaaacctagttataatttaaatctgttagtgcctacctctgacat
tgggaggttagagcacatgcctgtgcctccgggccacaactcagcccttc
ccattagaggttgggaagcagagtgtcagaaaaacaaaaaatcaaggcac
tgcttctcctacaaattgctgacctcatagggatgaccactcacaaaaaa
taacctagatgaa

gaattcttttatatttcttatatattggtgttattttagaaatttattgt
gatctgtgttctgtaagaactctgattccaaatctttttaattgctataa
cattgtgatatttagagaggcataaaccccatcacaactcttctgaaact
tcacagattttaatacaatggccatttccccatcagatagaataatggca
atgatttcaacttctaaaatatacttcattgtttgagttggtcttatact
ctaatttagggaagtcaagtgcttctataaaacggaattttattctccac
aggcacagaactgttcattgatatgttacttccttacagattttgaagaa
ttttatatgctaatgatgatacttctgtttctaatgttgactgtttttct
cttggcattgtgattagaatgctaggttcatttagctcttaaagagcctg
acacaggaagaaatttttaaatgttacatatcaatgttctcatatctgcc
ttgcttgaattcactattgcttttaattttttcaaatggtatattttaaa
ctcttgtctgttttcatatggtctgcaattaatcagagttctttcttatt
tttgtcataactgaatgaattattttcctataacatcagttagtagtaaa
cctggcattatatagaatgcattaataatgacattcttatctattttcca
tttaatggaaatactttattattatatcattaaaacacatcatatttaac
tgaataagactatattatatagattattcttcaaattagaagttgggact
ttcaataaaaactttgtggcttgagtttatatttatatatatttacatat
gcaaaatctattaaataaattaattaggaaattttataagttagatcacc
catttattgaattatactctagtcacaatattaaccttttgatatattgc
ttcattccttatataaccttttaaaatttattttaacattggaattatat
tcatctacaggaaaatttaatccttttgtagtatattcctggagactgga
aaaattttacttattttatatgtggtggtgaatgttttgtaagcacctca
taggtacctatgtgccatgcagtacttgaagtcaggaggggcacttgttc
ctgtgaactggaaggtaacatggccttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140778501_140779610
seq2: B6Ng01-331F02.b_48_1160 (reverse)

seq1  TTCATCTAGGTTATTTTTTTGTTGAGT-GTCATTCCTATGAGGTCAGCAA  49
      |||||||||||||||||||   ||||| ||||| ||||||||||||||||
seq2  TTCATCTAGGTTATTTTTT--GTGAGTGGTCATCCCTATGAGGTCAGCAA  48

seq1  TTTTGTAGGAG-AGCAGTGCCTTGATTTTTTGTTTTTCTGACACTCTGCT  98
       |||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  -TTTGTAGGAGAAGCAGTGCCTTGATTTTTTGTTTTTCTGACACTCTGCT  97

seq1  TCCCAACCTCTAATGGGAA-GGCTGAGTTGTGG-CCGGA-GCACAGGCAT  145
      ||||||||||||||||||| ||||||||||||| ||||| ||||||||||
seq2  TCCCAACCTCTAATGGGAAGGGCTGAGTTGTGGCCCGGAGGCACAGGCAT  147

seq1  GTGCTCTAACCT-CCAATGTCAGAGGTAGGCACTAACAGATTTAAATTAT  194
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTAACCTCCCAATGTCAGAGGTAGGCACTAACAGATTTAAATTAT  197

seq1  AACTAGGTTTTCTTTTTTGTTTTTTGTTTTTTGGTTTTTTTGCTTTTGTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGTTTTCTTTTTTGTTTTTTGTTTTTTGGTTTTTTTGCTTTTGTT  247

seq1  TTTGCTTTGTTTTTCTTTTTGTTTCTTTTCTTTTTTTTCTTTTACTTTTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTGTTTTTCTTTTTGTTTCTTTTCTTTTTTTTCTTTTACTTTTT  297

seq1  CTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  347

seq1  TCTTTTTTGAGATATAGCCTTCTCAACTAACACGAACTGTCTATTCTGTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTGAGATATAGCCTTCTCAACTAACACGAACTGTCTATTCTGTG  397

seq1  TTCACTCTAAATGCCAAAGTTAATACATAGAGTAGGCTGGTGATTTTTAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCTAAATGCCAAAGTTAATACATAGAGTAGGCTGGTGATTTTTAT  447

seq1  TTTATTTTCCAAGTAAATCCAATGTAACTTTCTATTTTATTTCCCTTAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCCAAGTAAATCCAATGTAACTTTCTATTTTATTTCCCTTAAT  497

seq1  AAATAGAATAGTTTTCCCTGGATGTTACCATTTGTTATACTGCGAATGCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAATAGTTTTCCCTGGATGTTACCATTTGTTATACTGCGAATGCT  547

seq1  GCTGGTAATTTTCCATTTCTACCTGGGGCTGCTTCTTCACCGGCCGATGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAATTTTCCATTTCTACCTGGGGCTGCTTCTTCACCGGCCGATGA  597

seq1  GGGTTTTCCTCAGGACAGCAATTGTGTTCGAATAAACTCTGAATAGTTAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTCCTCAGGACAGCAATTGTGTTCGAATAAACTCTGAATAGTTAT  647

seq1  TCTTTGAATGCTGGGAAGAAAATATCTTTTATTTGTGAGTTATTACAATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAATGCTGGGAAGAAAATATCTTTTATTTGTGAGTTATTACAATG  697

seq1  TTTATTCATTGTGGATAGTGTATTTGGGTCAAAATACATATTTTATTTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCATTGTGGATAGTGTATTTGGGTCAAAATACATATTTTATTTTT  747

seq1  TCTATCACTTATTTTAAATTATTCACATAATAGAGAATGACGCATTTTAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCACTTATTTTAAATTATTCACATAATAGAGAATGACGCATTTTAG  797

seq1  ATTTCTAAGCCTTCTATTGTTTAAGGGTTTCTTTTTCTTTTTTCAAGCTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAGCCTTCTATTGTTTAAGGGTTTCTTTTTCTTTTTTCAAGCTA  847

seq1  TTATGTGTGAAAACATACGTTTAAGATAATTATAATAATGAAAGTTGAGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTGAAAACATACGTTTAAGATAATTATAATAATGAAAGTTGAGT  897

seq1  TGAACCCAGTGCTTTGAAAATACTAAAAGTAGGCAGATATAAGTGCTATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAGTGCTTTGAAAATACTAAAAGTAGGCAGATATAAGTGCTATT  947

seq1  TGTGATTGCTAAAGTTTACAATCAGTTTGGTTTATAATCTAAGCATCAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGCTAAAGTTTACAATCAGTTTGGTTTATAATCTAAGCATCAAT  997

seq1  AGTAATAACTACCTACAATGAATTCTGAGTATGTTTTTCATATTAACAAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAACTACCTACAATGAATTCTGAGTATGTTTTTCATATTAACAAG  1047

seq1  CATTTTAGACATTTCATAAAGAACCTGGAGAGAGTGGCATTTACTAGATT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGACATTTCATAAAGAACCTGGAGAGAGTGGCATTTACTAGATT  1097

seq1  TACATACTTGGAATTC  1110
      ||||||||||||||||
seq2  TACATACTTGGAATTC  1113


seq1: chr2_140751720_140752893
seq2: B6Ng01-331F02.g_68_1246

seq1  GAATTCTTTTATATTTCTTATATATTGGTGTTATTTTAGAAATTTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATATTTCTTATATATTGGTGTTATTTTAGAAATTTATTGT  50

seq1  GATCTGTGTTCTGTAAGAACTCTGATTCCAAATCTTTTTAATTGCTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTGTTCTGTAAGAACTCTGATTCCAAATCTTTTTAATTGCTATAA  100

seq1  CATTGTGATATTTAGAGAGGCATAAACCCCATCACAACTCTTCTGAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGATATTTAGAGAGGCATAAACCCCATCACAACTCTTCTGAAACT  150

seq1  TCACAGATTTTAATACAATGGCCATTTCCCCATCAGATAGAATAATGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATTTTAATACAATGGCCATTTCCCCATCAGATAGAATAATGGCA  200

seq1  ATGATTTCAACTTCTAAAATATACTTCATTGTTTGAGTTGGTCTTATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCAACTTCTAAAATATACTTCATTGTTTGAGTTGGTCTTATACT  250

seq1  CTAATTTAGGGAAGTCAAGTGCTTCTATAAAACGGAATTTTATTCTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTAGGGAAGTCAAGTGCTTCTATAAAACGGAATTTTATTCTCCAC  300

seq1  AGGCACAGAACTGTTCATTGATATGTTACTTCCTTACAGATTTTGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGAACTGTTCATTGATATGTTACTTCCTTACAGATTTTGAAGAA  350

seq1  TTTTATATGCTAATGATGATACTTCTGTTTCTAATGTTGACTGTTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATGCTAATGATGATACTTCTGTTTCTAATGTTGACTGTTTTTCT  400

seq1  CTTGGCATTGTGATTAGAATGCTAGGTTCATTTAGCTCTTAAAGAGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCATTGTGATTAGAATGCTAGGTTCATTTAGCTCTTAAAGAGCCTG  450

seq1  ACACAGGAAGAAATTTTTAAATGTTACATATCAATGTTCTCATATCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAAGAAATTTTTAAATGTTACATATCAATGTTCTCATATCTGCC  500

seq1  TTGCTTGAATTCACTATTGCTTTTAATTTTTTCAAATGGTATATTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGAATTCACTATTGCTTTTAATTTTTTCAAATGGTATATTTTAAA  550

seq1  CTCTTGTCTGTTTTCATATGGTCTGCAATTAATCAGAGTTCTTTCTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCTGTTTTCATATGGTCTGCAATTAATCAGAGTTCTTTCTTATT  600

seq1  TTTGTCATAACTGAATGAATTATTTTCCTATAACATCAGTTAGTAGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCATAACTGAATGAATTATTTTCCTATAACATCAGTTAGTAGTAAA  650

seq1  CCTGGCATTATATAGAATGCATTAATAATGACATTCTTATCTATTTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCATTATATAGAATGCATTAATAATGACATTCTTATCTATTTTCCA  700

seq1  TTTAATGGAAATACTTTATTATTATATCATTAAAACACATCATATTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGGAAATACTTTATTATTATATCATTAAAACACATCATATTTAAC  750

seq1  TGAATAAGACTATATTATATAGATTATTCTTCAAATTAGAAGTTGGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGACTATATTATATAGATTATTCTTCAAATTAGAAGTTGGGACT  800

seq1  TTCAATAAAAACTTTGTGGCTTGAGTTTATATTTATATATATTTACATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAAAACTTTGTGGCTTGAGTTTATATTTATATATATTTACATAT  850

seq1  GCAAAATCTATTAAATAAATTAATTAGGAAATTTTATAAGTTAGATCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATCTATTAAATAAATTAATTAGGAAATTTTATAAGTTAGATCACC  900

seq1  CATTTATTGAATTATACTCTAGTCACAATATTAACCTTTTGATATATTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTGAATTATACTCTAGTCACAATATTAACCTTTTGATATATTGC  950

seq1  TTCATT-CTTATATAACCTTTTAAAATTTATTTTAACATT-GAATTATAA  998
      |||||| ||||||||||||||||||||||||||||||||| ||||||| |
seq2  TTCATTCCTTATATAACCTTTTAAAATTTATTTTAACATTGGAATTAT-A  999

seq1  TTCATCTACAAGAAAA-TTAATCCTTTTGTAGTATAATCCT-GAGACTGG  1046
      |||||||||| ||||| ||||||||||||||||||| |||| ||||||||
seq2  TTCATCTACAGGAAAATTTAATCCTTTTGTAGTATATTCCTGGAGACTGG  1049

seq1  AAAAAATTTTACTTATTTTTATTATGTG--TGTGAATGTTTTGTAAGCA-  1093
       ||||||||||||||||||   ||||||   |||||||||||||||||| 
seq2  -AAAAATTTTACTTATTTT--ATATGTGGTGGTGAATGTTTTGTAAGCAC  1096

seq1  CTCATAGTTA-CTATGTG-CATGCAGTACCCTCAGAGGCCAGGAGGGGCA  1141
      ||||||| || ||||||| ||||||||||     || | |||||||||||
seq2  CTCATAGGTACCTATGTGCCATGCAGTAC---TTGAAGTCAGGAGGGGCA  1143

seq1  C-TGGTCCTGTGGAACTGG-AGGTAACATG--CTTGT  1174
      | || |||||| ||||||| ||||||||||  |||||
seq2  CTTGTTCCTGT-GAACTGGAAGGTAACATGGCCTTGT  1179


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