BAC Information

Click to search

BAC

Clone NameB6Ng01-333A14
Chromosome2 (Build37)
Map Location 149,453,896 - 149,454,421
singlet/doubletsinglet
Overlap genenone
Upstream geneNxt1, Gzf1, Napb, Cstl1, Cst11, 8030411F24Rik, Cst12, Cst8, Cst13, Cst9, 9230104L09Rik, Cst3, OTTMUSG00000015744, Gm1330, EG668921, LOC433483, LOC383754, LOC100043593, LOC241715, Cst10
Downstream geneEG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333A14.bB6Ng01-333A14.g
ACCGA118964GA118965
length7571,262
definitionB6Ng01-333A14.b B6Ng01-333A14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaactagaatgcagatcagattgttcacagttttgggaagtggc
cccacatcagaatgcaggggtaaaagaaggcctcagatagcaactgacac
agttcattccagcctctgcctctcagaaccttgctcatatttttcatgtt
cttaaccaattttccaattgtgaatgattgacagaccagtgtgtagtctc
tactaaggccacttgcatagatgacagctcagaatttttttttcctctct
catcctgatggttatcagtccttcattcctgatgtttgtgagggtgcttt
cagaaagtattaattgataaagaacactcagtctaaatgtcagcagcttt
accctgtggactggattcaggatggaaaaaatggggaaattgaggaaatg
gagcagataacctgtttctgttttctgcttcctagccaccatcatgaagc
tgctctgttacaatgcaccctcaccctgaggtgacctgaatgaaaacata
agcaaaaaaaaaaaaaccccaacctttatttgagttgtgtttgtgagata
tttcgtgatagcaataaaaaaaatctagctaatattagcaaatttgtatc
aggattgagattattactattgctgaatatgccaatactagatagataga
tagatagatagatagatagatagatagatagatagatagatagatagagt
cagtcagtcagtcagtcagtcagtcttaggtttttgggaaggttttgtgg
tatggga
gaattccaggactggttcacaaggagggatcagaaggaaactgaactggc
aaaagtgtaatgtgaagccactggacacactagagctcttcaggaccttc
agagatatgacaagcagggttaaacacccagtgcttacacactcctgaac
aactgaattttttgcagatcttcatacttgcctaccactaagcctttgga
tgtaggctatgagcatgcctggatatctctgcagaatctatctccgtata
gtacataatagcctcaattgatatttatctggcaacatacctcagggtca
acctgaacatacaagttcttccacttttagagtcaaattgagatccgagc
acttctaagtgctattttgccctaggcatctcaggttaatgccaattgtc
tctgatttactcattcttgtgagttgttctaggtctctactgaattatga
tttcttctttttctctgtgtctctttcctagactatctggtgtgtgcctg
tgtgtgcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgaaaattgcttatattataaccaatctcttataaatgtggtttccctgg
catcgccctgctgcctctccagtttccatagatctgggaatcagtcctgt
gtggcgagacagtgagatgaggtttctttttccgtgtaagtggagcaggt
gagatgagtgagtcacctcctctgactgcccattttgaatgaactctttg
tacagttgtggaatttacatcctgcagatgaagagatgtttattgccact
gctctcacattgtgatgtcaggagcatgagctctgaatcagactggatga
gttggattcttgctctcacactttagcaataacctagtcatagataactc
atttgcacatgctctcggtcacatttgtaataagagctttatagtactct
tcacagagttaatattttttttaaaatcaactccttcgttggttggcttc
aaactatctaattgctgagaatgaactttgaactttactaatatgttctg
attctcctaactaattatgttcagatttacaggggttacacgtgatatct
tcctttatgatcgtctatggaagggatccaggggaagatgtctttaggaa
agatggctttatcttggtcgttcatcgcatcgacgttggactctcgctac
actctaggttattctctggaacatgaggagtgcacctatatcgcgaatga
gtggtatagacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_149453896_149454421
seq2: B6Ng01-333A14.b_45_570 (reverse)

seq1  AAGGTTGGGGTTTTTTTTTTTTTGCTTATGTTTTCATTCAGGTCACCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGGGGTTTTTTTTTTTTTGCTTATGTTTTCATTCAGGTCACCTCA  50

seq1  GGGTGAGGGTGCATTGTAACAGAGCAGCTTCATGATGGTGGCTAGGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGGGTGCATTGTAACAGAGCAGCTTCATGATGGTGGCTAGGAAGC  100

seq1  AGAAAACAGAAACAGGTTATCTGCTCCATTTCCTCAATTTCCCCATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGAAACAGGTTATCTGCTCCATTTCCTCAATTTCCCCATTTTT  150

seq1  TCCATCCTGAATCCAGTCCACAGGGTAAAGCTGCTGACATTTAGACTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTGAATCCAGTCCACAGGGTAAAGCTGCTGACATTTAGACTGAG  200

seq1  TGTTCTTTATCAATTAATACTTTCTGAAAGCACCCTCACAAACATCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTATCAATTAATACTTTCTGAAAGCACCCTCACAAACATCAGGA  250

seq1  ATGAAGGACTGATAACCATCAGGATGAGAGAGGAAAAAAAAATTCTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGACTGATAACCATCAGGATGAGAGAGGAAAAAAAAATTCTGAGC  300

seq1  TGTCATCTATGCAAGTGGCCTTAGTAGAGACTACACACTGGTCTGTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTATGCAAGTGGCCTTAGTAGAGACTACACACTGGTCTGTCAAT  350

seq1  CATTCACAATTGGAAAATTGGTTAAGAACATGAAAAATATGAGCAAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACAATTGGAAAATTGGTTAAGAACATGAAAAATATGAGCAAGGTT  400

seq1  CTGAGAGGCAGAGGCTGGAATGAACTGTGTCAGTTGCTATCTGAGGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGCAGAGGCTGGAATGAACTGTGTCAGTTGCTATCTGAGGCCTT  450

seq1  CTTTTACCCCTGCATTCTGATGTGGGGCCACTTCCCAAAACTGTGAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACCCCTGCATTCTGATGTGGGGCCACTTCCCAAAACTGTGAACAA  500

seq1  TCTGATCTGCATTCTAGTTGGAATTC  526
      ||||||||||||||||||||||||||
seq2  TCTGATCTGCATTCTAGTTGGAATTC  526