BAC Information

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BAC

Clone NameB6Ng01-333F17
Chromosome2 (Build37)
Map Location 64,202,801 - 64,350,377
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667257, Fign
Downstream geneLOC620544, LOC667291, Grb14, Cobll1, LOC383705, 9330158F14Rik, Scn3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333F17.bB6Ng01-333F17.g
ACCGA119192GA119193
length6091,154
definitionB6Ng01-333F17.b B6Ng01-333F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,349,769 - 64,350,377)(64,202,801 - 64,203,952)
sequence
gaattccaagcaaatgtcaccagtctgaccctgaaattcgaactaactgc
cctgtccctatgatgagcatggtttttgttgtttgtttgtttgtttgaag
taagtaggttttgtctttccttttgtttgtttaactgttctaacagttta
gggaacaggtttaaaagctaggacatttctgtgtagccactgcaatttta
acaacagataaactctttagagaaaatgtccactggggtagaactaaaat
ctggaagtaatcagaaaccactgagcatcagaaattcttttaaaaaaaat
ttaaacgcagctggagcctgctggtagtcaggataggattcaggtaccta
atcccttggggtgagccaccagtgttcttcatccttgttttggatgtgga
actaaaaaaccccagggtgttgatggctgcacagaaactgtggcatctga
cacccgctgggagcaataaataaagaagtgtgcctgcccttgtgggttgt
tcctcccttgttcattccttgagtccatcttctcttcttttgctgagttt
taggagagagagttctgctttgccttgtaaacaaatatggtgtgtgagtg
tgtgtgtgt

gaattctaatggtcttcaccttaacaattgttagttggtcacatatcact
tgtattattatcagtagctatatcaattcttaggttagtgctgagattat
tttaaataattagctaatatttgaagcatggtgatttcactaaaaggtgt
taaaattttccccaaaatgattttattattaaccatggtataaaattctt
ggatatcaaatactatatttgatatttcaaatactatatagaataagtaa
atatgtactgattgagaataaaatatatgcattatatttgtgagctacac
aagtagtgacttaatatgtttggccgtaaatggtaattcattgtaattag
atagcaaactcacaataattttgcttcaaggttattagaaaagctaagta
tttcatatagaatgtaaagcaactgattttaaccaaaggagctctgctta
tcatattgactcttcttttctttaagcataaccttccagagctttcatgg
cttacaaggctctgagagcaatgtgttgtgaaatcgacttcctggaatac
tgattagcccttctggtgacagacagcaaggtggcactggtggaaatcct
aatgccagaacagatgttcagagagttgacttgtattgggtaaagagaag
gttggggggaggaaatctgccacagcaatgaggcttagtgcagatccgga
tattcaacatctgcaactttccaggaggctttctggtcccggtcaatact
tctgtctgttccttgacaaatatatttatctgtgtcttcttggttccttt
ctgccgtcttggtgcctctttgcagtcctgagacatttctaaaacagcta
aatggtgatgagagttttcctggaaaatgcaaaagaatttcatgcttttt
gtgcacaaacaaacaaacaaacaaacaaccagatgccctctaatcccaag
gaaagtggttgggagagaaaggaaagctgcctttgccttgacaccaagaa
aacacgagaactttgtgctttacctgcatttctaaggtgttgacatccaa
gccacgatgcttctgtttgctgggaagaatactagaagtttcaatttcaa
taatcaagtttatccttcatttcttgtttcatgaaaatttggcttagcct
acgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_64349769_64350377
seq2: B6Ng01-333F17.b_50_658 (reverse)

seq1  ACACACACACACTCACACACCATATTTGTTTACAAGGCAAAGCAGAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACTCACACACCATATTTGTTTACAAGGCAAAGCAGAACTC  50

seq1  TCTCTCCTAAAACTCAGCAAAAGAAGAGAAGATGGACTCAAGGAATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTAAAACTCAGCAAAAGAAGAGAAGATGGACTCAAGGAATGAAC  100

seq1  AAGGGAGGAACAACCCACAAGGGCAGGCACACTTCTTTATTTATTGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGAACAACCCACAAGGGCAGGCACACTTCTTTATTTATTGCTCC  150

seq1  CAGCGGGTGTCAGATGCCACAGTTTCTGTGCAGCCATCAACACCCTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGGTGTCAGATGCCACAGTTTCTGTGCAGCCATCAACACCCTGGGG  200

seq1  TTTTTTAGTTCCACATCCAAAACAAGGATGAAGAACACTGGTGGCTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGTTCCACATCCAAAACAAGGATGAAGAACACTGGTGGCTCACC  250

seq1  CCAAGGGATTAGGTACCTGAATCCTATCCTGACTACCAGCAGGCTCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGATTAGGTACCTGAATCCTATCCTGACTACCAGCAGGCTCCAGC  300

seq1  TGCGTTTAAATTTTTTTTAAAAGAATTTCTGATGCTCAGTGGTTTCTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTTAAATTTTTTTTAAAAGAATTTCTGATGCTCAGTGGTTTCTGAT  350

seq1  TACTTCCAGATTTTAGTTCTACCCCAGTGGACATTTTCTCTAAAGAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCAGATTTTAGTTCTACCCCAGTGGACATTTTCTCTAAAGAGTTT  400

seq1  ATCTGTTGTTAAAATTGCAGTGGCTACACAGAAATGTCCTAGCTTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTGTTAAAATTGCAGTGGCTACACAGAAATGTCCTAGCTTTTAAA  450

seq1  CCTGTTCCCTAAACTGTTAGAACAGTTAAACAAACAAAAGGAAAGACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCCTAAACTGTTAGAACAGTTAAACAAACAAAAGGAAAGACAAA  500

seq1  ACCTACTTACTTCAAACAAACAAACAAACAACAAAAACCATGCTCATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTACTTCAAACAAACAAACAAACAACAAAAACCATGCTCATCAT  550

seq1  AGGGACAGGGCAGTTAGTTCGAATTTCAGGGTCAGACTGGTGACATTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGGGCAGTTAGTTCGAATTTCAGGGTCAGACTGGTGACATTTGC  600

seq1  TTGGAATTC  609
      |||||||||
seq2  TTGGAATTC  609


seq1: chr2_64202801_64203952
seq2: B6Ng01-333F17.g_67_1220

seq1  GAATTCTAATGGTCTTCACCTTAACAATTGTTAGTTGGTCACATATCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGGTCTTCACCTTAACAATTGTTAGTTGGTCACATATCACT  50

seq1  TGTATTATTATCAGTAGCTATATCAATTCTTAGGTTAGTGCTGAGATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATTATCAGTAGCTATATCAATTCTTAGGTTAGTGCTGAGATTAT  100

seq1  TTTAAATAATTAGCTAATATTTGAAGCATGGTGATTTCACTAAAAGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAATTAGCTAATATTTGAAGCATGGTGATTTCACTAAAAGGTGT  150

seq1  TAAAATTTTCCCCAAAATGATTTTATTATTAACCATGGTATAAAATTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTCCCCAAAATGATTTTATTATTAACCATGGTATAAAATTCTT  200

seq1  GGATATCAAATACTATATTTGATATTTCAAATACTATATAGAATAAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCAAATACTATATTTGATATTTCAAATACTATATAGAATAAGTAA  250

seq1  ATATGTACTGATTGAGAATAAAATATATGCATTATATTTGTGAGCTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACTGATTGAGAATAAAATATATGCATTATATTTGTGAGCTACAC  300

seq1  AAGTAGTGACTTAATATGTTTGGCCGTAAATGGTAATTCATTGTAATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTGACTTAATATGTTTGGCCGTAAATGGTAATTCATTGTAATTAG  350

seq1  ATAGCAAACTCACAATAATTTTGCTTCAAGGTTATTAGAAAAGCTAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAACTCACAATAATTTTGCTTCAAGGTTATTAGAAAAGCTAAGTA  400

seq1  TTTCATATAGAATGTAAAGCAACTGATTTTAACCAAAGGAGCTCTGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATAGAATGTAAAGCAACTGATTTTAACCAAAGGAGCTCTGCTTA  450

seq1  TCATATTGACTCTTCTTTTCTTTAAGCATAACCTTCCAGAGCTTTCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTGACTCTTCTTTTCTTTAAGCATAACCTTCCAGAGCTTTCATGG  500

seq1  CTTACAAGGCTCTGAGAGCAATGTGTTGTGAAATCGACTTCCTGGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAGGCTCTGAGAGCAATGTGTTGTGAAATCGACTTCCTGGAATAC  550

seq1  TGATTAGCCCTTCTGGTGACAGACAGCAAGGTGGCACTGGTGGAAATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGCCCTTCTGGTGACAGACAGCAAGGTGGCACTGGTGGAAATCCT  600

seq1  AATGCCAGAACAGATGTTCAGAGAGTTGACTTGTATTGGGTAAAGAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAACAGATGTTCAGAGAGTTGACTTGTATTGGGTAAAGAGAAG  650

seq1  GTTGGGGGGAGGAAATCTGCCACAGCAATGAGGCTTAGTGCAGATCCGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGGGAGGAAATCTGCCACAGCAATGAGGCTTAGTGCAGATCCGGA  700

seq1  TATTCAACATCTGCAACTTTCCAGGAGGCTTTCTGGTCCCGGTCAATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAACATCTGCAACTTTCCAGGAGGCTTTCTGGTCCCGGTCAATACT  750

seq1  TCTGTCTGTTCCTTGACAAATATATTTATCTGTGTCTTCTTGGTTCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTTCCTTGACAAATATATTTATCTGTGTCTTCTTGGTTCCTTT  800

seq1  CTGCCGTCTTGGTGCCTCTTTGCAGTCCTGAGACATTTCTAAAACAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTCTTGGTGCCTCTTTGCAGTCCTGAGACATTTCTAAAACAGCTA  850

seq1  AATGGTGATGAGAGTTTTCCTGGAAAATGCAAAAGAATTTCATGCTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGATGAGAGTTTTCCTGGAAAATGCAAAAGAATTTCATGCTTTTT  900

seq1  GTGCACAAACAAACAAACAAACAAACAACCAGATGCCCTCTAATCCCAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAAACAAACAAACAAACAAACAACCAGATGCCCTCTAATCCCAAG  950

seq1  GAAAGTGGTTGGGAGAGAAAGGAAAGCTGCCTTTGCCTTGACACC-AGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAAGTGGTTGGGAGAGAAAGGAAAGCTGCCTTTGCCTTGACACCAAGAA  1000

seq1  AACAACGAGAACTTTGTGCTTTACCTGCATTTTCAAAGTGTTGACATCCA  1049
      ||| ||||||||||||||||||||||||||||  || |||||||||||||
seq2  AAC-ACGAGAACTTTGTGCTTTACCTGCATTTCTAAGGTGTTGACATCCA  1049

seq1  AGCCACGATGCTTCTGTTTGCTGGGAAG-ATACTTAGAAGTTTTCATTTC  1098
      |||||||||||||||||||||||||||| |||| |||||||||  |||||
seq2  AGCCACGATGCTTCTGTTTGCTGGGAAGAATAC-TAGAAGTTTCAATTTC  1098

seq1  -ATAATCAAGTTTAT-CTTCATTTCTTGTTTTCATGATAAATTTGCTTAG  1146
       |||||||||||||| |||||||||||| |||||||| || || ||||||
seq2  AATAATCAAGTTTATCCTTCATTTCTTG-TTTCATGAAAATTTGGCTTAG  1147

seq1  -CTACGC  1152
       ||||||
seq2  CCTACGC  1154


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