BAC Information

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BAC

Clone NameB6Ng01-333M08
Chromosome2 (Build37)
Map Location 66,972,529 - 66,973,751
singlet/doubletsinglet
Overlap genenone
Upstream geneTtc21b, Scn1a, LOC100039486, LOC383706, Scn9a, Scn7a, LOC383707, LOC100039540
Downstream geneGm1322, Cmya3, LOC621171, LOC227995, B3galt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333M08.bB6Ng01-333M08.g
ACCGA119454GA119455
length1,2071,153
definitionB6Ng01-333M08.b B6Ng01-333M08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacaaccagagcaatacagagaaaccctgtctcgaaatccc
cccctccgcaaaaataaaagacttccattaaaaaaatatctaataaagaa
attaaataataaaaaagagaaagtagtcactgctcagcagtgttgttaag
agataatgtaatgattagatagcaattctgtttagaggaatgaatttccc
agcctatatcattgttctaataatttggctacttctaaaccatggcttca
aaagggaagatatgaataaaatagtatggtacaacacaattaattctctc
tgtagattatacccgtgtttcatttcaattacttaagaagttataacaat
tgttatttactgcccaacatttagaagaggagatgaatggctttaaccat
catttctttgaaggaaagaatgcatcttcttacacattgttagtttagtt
ctgtaatgtttagcaacataattatttattacatttatgcctacagtgtg
tctagaactgcgatcaacatatctcacagcaaatatatacatatactata
gctatatgctctaaaattttttgcagataaagacactaaatacaatttta
aagagatggttaacaatatcctgttcattaatacatgcatcctaccatgg
gagaggagatcctaggtgatatgctatcttattattatgtgacagagatt
tgttggtgtgttaaattcttcaaatcatttcatattgttaatgtgtaaag
gaaagtaataaaaaataagcttggtagaaaggaatgaagtagttcctggg
gtcatctctcactaaccatatagagtcttgaaattcatctttctttgcct
ccttttaagagtgaagagttgagagttaaattcccaacatgtatgtacac
aactcagcaggcgagactaaaggaaggaaagtactacaccttcttagaaa
tacagataggagaaaggtataccacgaacattgtaaaataaattagcatt
ttgaaagccttgtgccaccaggattccctgctgtaactatagcacttcac
agagaaacaaatcagctaaacattttatggtatcctagatagaaagccat
attagctatattttgcaccctgaaattctagaattaccatttttatagat
cagcctatggaagggagattgatcatctgccaatgcaagtggacgcagga
gggagtt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggaggttcctca
gaaaattgaacatagtattaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggattgacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccataaccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctctttgacactatgcccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttgcaaccc
tatacagaacaacattatgactacagtaccccggagctctgactctagct
gcatatgtatcaaagatgctagtcgcatcactgcaagagagccatgacac
aaactttaatggctcagtcaggcacgctaggcaaaagaatgatgcatagg
gta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_66972529_66973751
seq2: B6Ng01-333M08.b_46_1252 (reverse)

seq1  AACTCCCTCCTTCCCTTCCAACTTTCCATTGCAAATATAAATTCAAATCT  50
      |||||||||||   | ||| |||| |  | ||| ||    ||   |||||
seq2  AACTCCCTCCT--GCGTCC-ACTTGCATTGGCAGAT---GAT--CAATCT  42

seq1  CCC-TCCATAGCCTGATCTATAAAAATGGTAA-TCTAGAATTTCAGGGTG  98
      ||| ||||||| |||||||||||||||||||| |||||||||||||||||
seq2  CCCTTCCATAGGCTGATCTATAAAAATGGTAATTCTAGAATTTCAGGGTG  92

seq1  CAAAATATAGGCTATTAT-GCTTTCTATCTAGAATAACCAATTAAAAATG  147
      ||||||||| |||| ||| ||||||||||||| || ||||    ||||||
seq2  CAAAATATA-GCTAATATGGCTTTCTATCTAGGAT-ACCA---TAAAATG  137

seq1  TTTAGCTGATTTGTTTCTCTGTGAAGTGCTAATAGTTTACAGCAGGGAAT  197
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  TTTAGCTGATTTGTTTCTCTGTGAAGTGCT-ATAG-TTACAGCAGGGAAT  185

seq1  CCTGGTGGCACAAGGCTTTCAAAATGCTAATTTTTATTTTTACAATGTTC  247
      |||||||||||||||||||||||||||||||||    |||||||||||||
seq2  CCTGGTGGCACAAGGCTTTCAAAATGCTAATTT---ATTTTACAATGTTC  232

seq1  GTGGTATACCTTTTCTCCTATCTGTATTTCTAAGAAGGTGTAGTACTTTC  297
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATACC-TTTCTCCTATCTGTATTTCTAAGAAGGTGTAGTACTTTC  281

seq1  CTTCC-TTAGTCTCGCCTGCCTGAGTTGTGTACATACATGTTGGGAATTT  346
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTCCTTTAGTCTCGCCTG-CTGAGTTGTGTACATACATGTTGGGAATTT  330

seq1  AACTCTCAACTCTTCACTCTTAAAAGGAGGCAAAGAAAGATGAATTTCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCAACTCTTCACTCTTAAAAGGAGGCAAAGAAAGATGAATTTCAA  380

seq1  GACTCTATATGGTTAGTGAGAGATGACCCCAGGAACTACTTCATTCCTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTATATGGTTAGTGAGAGATGACCCCAGGAACTACTTCATTCCTTT  430

seq1  CTACCAAGCTTATTTTTTATTACTTTCCTTTACACATTAACAATATGAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAGCTTATTTTTTATTACTTTCCTTTACACATTAACAATATGAAA  480

seq1  TGATTTGAAGAATTTAACACACCAACAAATCTCTGTCACATAATAATAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGAAGAATTTAACACACCAACAAATCTCTGTCACATAATAATAAG  530

seq1  ATAGCATATCACCTAGGATCTCCTCTCCCATGGTAGGATGCATGTATTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATATCACCTAGGATCTCCTCTCCCATGGTAGGATGCATGTATTAA  580

seq1  TGAACAGGATATTGTTAACCATCTCTTTAAAATTGTATTTAGTGTCTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGGATATTGTTAACCATCTCTTTAAAATTGTATTTAGTGTCTTTA  630

seq1  TCTGCAAAAAATTTTAGAGCATATAGCTATAGTATATGTATATATTTGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAAAAATTTTAGAGCATATAGCTATAGTATATGTATATATTTGCT  680

seq1  GTGAGATATGTTGATCGCAGTTCTAGACACACTGTAGGCATAAATGTAAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATATGTTGATCGCAGTTCTAGACACACTGTAGGCATAAATGTAAT  730

seq1  AAATAATTATGTTGCTAAACATTACAGAACTAAACTAACAATGTGTAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTATGTTGCTAAACATTACAGAACTAAACTAACAATGTGTAAGA  780

seq1  AGATGCATTCTTTCCTTCAAAGAAATGATGGTTAAAGCCATTCATCTCCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCATTCTTTCCTTCAAAGAAATGATGGTTAAAGCCATTCATCTCCT  830

seq1  CTTCTAAATGTTGGGCAGTAAATAACAATTGTTATAACTTCTTAAGTAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAATGTTGGGCAGTAAATAACAATTGTTATAACTTCTTAAGTAAT  880

seq1  TGAAATGAAACACGGGTATAATCTACAGAGAGAATTAATTGTGTTGTACC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAAACACGGGTATAATCTACAGAGAGAATTAATTGTGTTGTACC  930

seq1  ATACTATTTTATTCATATCTTCCCTTTTGAAGCCATGGTTTAGAAGTAGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATTTTATTCATATCTTCCCTTTTGAAGCCATGGTTTAGAAGTAGC  980

seq1  CAAATTATTAGAACAATGATATAGGCTGGGAAATTCATTCCTCTAAACAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTAGAACAATGATATAGGCTGGGAAATTCATTCCTCTAAACAG  1030

seq1  AATTGCTATCTAATCATTACATTATCTCTTAACAACACTGCTGAGCAGTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTATCTAATCATTACATTATCTCTTAACAACACTGCTGAGCAGTG  1080

seq1  ACTACTTTCTCTTTTTTATTATTTAATTTCTTTATTAGATATTTTTTTAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTCTCTTTTTTATTATTTAATTTCTTTATTAGATATTTTTTTAA  1130

seq1  TGGAAGTCTTTTATTTTTGCGGAGGGGGGGATTTCGAGACAGGGTTTCTC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCTTTTATTTTTGCGGAGGGGGGGATTTCGAGACAGGGTTTCTC  1180

seq1  TGTATTGCTCTGGTTGTCCTGGAATTC  1223
      |||||||||||||||||||||||||||
seq2  TGTATTGCTCTGGTTGTCCTGGAATTC  1207


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