BAC Information

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BAC

Clone NameB6Ng01-333P07
Chromosome2 (Build37)
Map Location 112,550,829 - 112,551,886
singlet/doubletsinglet
Overlap geneRyr3
Upstream geneOlfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
Downstream gene4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333P07.bB6Ng01-333P07.g
ACCGA119581GA119582
length1,1471,065
definitionB6Ng01-333P07.b B6Ng01-333P07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccaaatggctgagaagcacctgaaaaaatg
ctcagcatccttagtcattagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagccagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggtgggattgcaagcttgtacaaccactctgg
aaatcagtctggcggttcctcagaaaattggacatagtactaccagagga
tcccgcaatacctctcctgggcatatatccagaagattttccaactggta
agaaggacacatgctccactatgttcatagcagccttatttataatagcc
agaagctggaaagaacccagatgccctgcaacagaggaatggatacagaa
aatgtggtatatttacacaatggagtactactcagctattaaaaagaatg
aatttatgaaattcctaggcaaatggatggacctggagggcatcatcctg
agtgaggtaacccaatcaaaaaagaactcacatcatatgtactcactgat
aagtggatattagcccagatacttagaatacccaagatataagttacaat
ttgtgaaactcatgaaactaaagaagaacgaagaccaaagtatggacact
ttgccccttcttagaattgggaacaaaacacccatggaaggagttacaga
gacaaagattggagctgagacgaaaggatggaccatctagagactgccat
atctggggatccatcccataatcagcttccaaacgctgacaccattgcat
acactagcaagattttgctgaaaggaccctgatatagctgtgagattatg
tgagattatgccagggcttagcaaatacagaagtggatgctcacagtcag
ctattggatggatcacaaggcccccaatggaggagctagagaaagtaccc
aaggagctaaagggattctgcaaccctatagtggaacaacatatgaacta
accagtaccccgagctcgtgtctttagctgcatattatatcagtagatgg
cttagttggccatcagtgaaagagaggcccatggtcgtgcaactttacat
gccccagtattggggaatgctagggccagaagtgaagttggttggta
gaattcaaggccagcctgagacatgtctcaaacaaaaacagcatagtaaa
ctgaatgtcatgctttcctcaaacccttaccccccctcccctgctaatct
agacccctcagatctccaagaagccctatagatcagctgccctcctctgg
gatgatcattaccttatttgttttttggtgcttaagaaacccattggcag
ccgggcagtggtggtgcacgactttatttacagcactacagcagaggcag
gcgaatttctgagttcaaggccagcctggtctacagagtgagttctagga
gagccaggactacacagagaaaccctgtcttgaaaaacaaaaaaaaaaaa
aaaaaaaaaaacaaaaaaaaaaaaaagaagaagaaagaaagaaatccatt
ggctcttttgttactaattattggtaaataaccctttgcattttgcactg
ttatataaaactcaaattcctcaatgtcattcagcatttgaatttctaag
actggcttgaatgtagctaacaatagcagcactttgttttgttgcttttt
ttttttttaattttctctctttctttttatcctctttaactcctgacgtg
caataggctctaaataaatgctattagccaattttctgttctcgaagcca
ccaaaagagggaaacttttggaaaatgaatatatgtcccacagtcaagaa
accatgaatacatgaatatttagtaccctgcctgtcacactagagtttgg
gagatccacaccgtggaaaatcattgtttttgatggaacttcagtttagt
taggtcagggagtccactttgtcacagcttcctgcatctgaccttctgga
ccatgaaatgccaatgctgggctacagagagcacaacactgaatggtgat
ctttcctggcaaatgcatagacacattttgtaagaagaacaggtaggagt
attcctacatcctctggtcctcagaaatgaactgagaattagaattgtaa
ctactttgactgctgataatgcaagacctggtggacagataattaaacca
gggtaaccacagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112550829_112551886
seq2: B6Ng01-333P07.g_67_1131 (reverse)

seq1  GGACTGTG--TACCCTG--TTTATTATCTGTCCACAGGGTC-TGCATTAT  45
      ||||||||  |||||||  || |||||||||||||  |||| ||||||||
seq2  GGACTGTGGTTACCCTGGTTTAATTATCTGTCCACCAGGTCTTGCATTAT  50

seq1  CCAGCAGTCAAAGTAGTTACAATTCTAA-TCTCAGTTCATTTCTGAGACC  94
       ||||||||||||||||||||||||||| ||||||||||||||||||  |
seq2  -CAGCAGTCAAAGTAGTTACAATTCTAATTCTCAGTTCATTTCTGAGGAC  99

seq1  AAGAGGATGTAGGAATACTTCCTACCTGTTCTTC-TAC-AAATGTGTCTA  142
       ||||||||||||||||| ||||||||||||||| ||| |||||||||||
seq2  CAGAGGATGTAGGAATAC-TCCTACCTGTTCTTCTTACAAAATGTGTCTA  148

seq1  TGCATTTGCCAGGAAAGATCACCATTCAGTGTTGTGCTCTCTGTAGCCCA  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGCCAGGAAAGATCACCATTCAGTGTTGTGCTCTCTGTAGCCCA  198

seq1  GCATTGGCATTTCATGGTCCAGGAGGTCAGATGCAGGAAGCTGTGAC-AA  241
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  GCATTGGCATTTCATGGTCCAGAAGGTCAGATGCAGGAAGCTGTGACAAA  248

seq1  GTGGACTCCCTGACCTAACTAAACTGAAGTTCCATCAAAAACAATGATTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACTCCCTGACCTAACTAAACTGAAGTTCCATCAAAAACAATGATTT  298

seq1  TCCACGGTGTGGATCTCCCAAACTCTAGTGTGACAGGCAGGGTACTAAAT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGGTGTGGATCTCCCAAACTCTAGTGTGACAGGCAGGGTACTAAAT  348

seq1  ATTCATGTATTCATGGTTTCTTGACTGTGGGACATATATTCATTTTCCAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTATTCATGGTTTCTTGACTGTGGGACATATATTCATTTTCCAA  398

seq1  AAGTTTCCCTCTTTTGGTGGCTTCGAGAACAGAAAATTGGCTAATAGCAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCCTCTTTTGGTGGCTTCGAGAACAGAAAATTGGCTAATAGCAT  448

seq1  TTATTTAGAGCCTATTGCACGTCAGGAGTTAAAGAGGATAAAAAGAAAGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGAGCCTATTGCACGTCAGGAGTTAAAGAGGATAAAAAGAAAGA  498

seq1  GAGAAAATTAAAAAAAAAAAAAGCAACAAAACAAAGTGCTGCTATTGTTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATTAAAAAAAAAAAAAGCAACAAAACAAAGTGCTGCTATTGTTA  548

seq1  GCTACATTCAAGCCAGTCTTAGAAATTCAAATGCTGAATGACATTGAGGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATTCAAGCCAGTCTTAGAAATTCAAATGCTGAATGACATTGAGGA  598

seq1  ATTTGAGTTTTATATAACAGTGCAAAATGCAAAGGGTTATTTACCAATAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTTTTATATAACAGTGCAAAATGCAAAGGGTTATTTACCAATAA  648

seq1  TTAGTAACAAAAGAGCCAATGGATTTCTTTCTTTCTTCTTCTTTTTTTTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACAAAAGAGCCAATGGATTTCTTTCTTTCTTCTTCTTTTTTTTT  698

seq1  TTTTTGTTTTTTTTTTTTTTTTTTTTTTTGTTTTTCAAGACAGGGTTTCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTTTTTTTTTTTTTTTTTTTGTTTTTCAAGACAGGGTTTCT  748

seq1  CTGTGTAGTCCTGGCTCTCCTAGAACTCACTCTGTAGACCAGGCTGGCCT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGTCCTGGCTCTCCTAGAACTCACTCTGTAGACCAGGCTGGCCT  798

seq1  TGAACTCAGAAATTCGCCTGCCTCTGCTGTAGTGCTGTAAATAAAGTCGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGAAATTCGCCTGCCTCTGCTGTAGTGCTGTAAATAAAGTCGT  848

seq1  GCACCACCACTGCCCGGCTGCCAATGGGTTTCTTAAGCACCAAAAAACAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACCACTGCCCGGCTGCCAATGGGTTTCTTAAGCACCAAAAAACAA  898

seq1  ATAAGGTAATGATCATCCCAGAGGAGGGCAGCTGATCTATAGGGCTTCTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTAATGATCATCCCAGAGGAGGGCAGCTGATCTATAGGGCTTCTT  948

seq1  GGAGATCTGAGGGGTCTAGATTAGCAGGGGAGGGGGGGTAAGGGTTTGAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCTGAGGGGTCTAGATTAGCAGGGGAGGGGGGGTAAGGGTTTGAG  998

seq1  GAAAGCATGACATTCAGTTTACTATGCTGTTTTTGTTTGAGACATGTCTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATGACATTCAGTTTACTATGCTGTTTTTGTTTGAGACATGTCTC  1048

seq1  AGGCTGGCCTTGAATTC  1058
      |||||||||||||||||
seq2  AGGCTGGCCTTGAATTC  1065